Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3402 ATGTTCTCCAACTTGTATTCCGGAAAAGCTAGAGAAGTCATGGCTTCTTCATCTGCTGCTCCTTTTGATTATGAGATCTTGGACAAAGATCGTGACATCCCTAGAACTGCTGGACTTCCATCCAATCGCACAAATCCGTGGATTGAACCTGAAACATTGAAACTTCAACACCGAATTGGTCGAGGACCTTTTGGTGATGTTTGGCTTGCAACTCTTCATCAGTCAACTGAAGATTATGATCAACACCATGAAGTTGCTGCTAAGATGTTACATCCAATCAGAGAGGAGCATGTGAAGATTGTACTTGAGAAATTCAATGAATTATTCTTTAAGTGCCAAGGAATTTCTAGTGTTTCTTGGATACATGGAATTTCGATATTAAATGGAAGGATCTGTGTCATTATGAATTTGTATGAGGGTTCAATTGGTGACAAGATGGCTAGACTCAAAGAGGGTTGGATTTCATTGCATGATGTTTTGAGGTATGGGATCAGTCTGGCTCAAGGCATTCTGGAGCTTCACTCTAAAGGGATCCTTGTTCTCAACCTTAAACCATGTAATGTTCTTCTCAACGACAATGATCAAGCAATTTTGGGAGATGTTGGTATTCCAAATCTTTTGCTTGGTTCCTCATTTGTTAGCTCAGAAATCGCTCAGAGGCTTGGAACTCCTAATTACATGGCTCCAGAACAATGGAAACCAGAGGTCAGAGGCCCAATATCGCTTGAAACGGATTCATGGGGATTTGGGTGTACCATTGTTGAAATGTTGACCGGTAATCAACCTTGGTATGGATGCTCTGTTGGTGGAATATACGGATCAGTTGTTGAAAAGCATGAAAAGCCGCATATCCCAAGTGGCCTTCCTTCTCCCATTGAGAATATCCTTAGTGGATGTTTTGAGTATGATTTGAGGAATCGCCCTCTGATGGTAGATATTCTGCGAGTCTTTAAAAGCTCATTGAAGGACCTGGCCAGTGATGTCGGATGGATATATCAAGGAAATCTGAAAGTAATCCCAAAATCAGGCAGCACTGACTACACTGAATGGTTCCTCTCAAAGGATCATCTTCAGGTTGGCGACATGGTCCGATCCAGAAAGCCTCCCAACTCATGCAAAGCTCAAAACATGATTGTCCCAGAAGGAATTGTTGTCGGCCTAGAACGTACTGCGGAACACGGATTCGTTCTTGTGAGGGTCCATGGTATTCACGACCCTATAAGAATTCACGTGTCAACCCTTGAACGCGTCACAAATGGCTTGGCAGCTGGTGATTGGGTACGTGTGAAAGATAAAAATCAGAAACACTCACCAGTGGGCATTCTACATTCCATCAACCGCGATCACAGTAAAGCTGCTGTTGGATTAATTGGGCTGCAAACTCTATGGAACGGAAACTCTTCAGAACTCGAAATGGCAGAATCATTCTGTGTGGGCCAGTTTGTTAGGCCGAAAGAGAATGTTTTAACCCCTCAATTTGATTGGCGTCGTAAAGGATGCGGGGCCTTGGCTACTGGTAGGATTTCATGGATACTACCAAATGGGTGTTTGGTTGTCAAATTTCCAGGGTTGGTGACTTTTGGGAAGGAATCAAACACCTTCTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGATTTCAAGACTTGTCCTGGGATGATAGAAAAGTATCAACATGTTGAGGATCATCATTGGGCAGTTAGACCTGTTCTAGTTGCACTTACCATGTTTACAGCTTTTAAACTAGGCATATTAGTTGGAAGAAAAGTGAGAAAGTGCAAGAAGATCAATGCAATAGTAAGCAAAAACCAACATGTTGAAGGTCAGAACACAAACAGTCCTACAAAGAGTACAAGTCATGGCAACACAACATGGGTTCCTTCAGTTGCTAATATCCTTTTTAAAGATGGTGCTTAA 1914 0.4248 MFSNLYSGKAREVMASSSAAPFDYEILDKDRDIPRTAGLPSNRTNPWIEPETLKLQHRIGRGPFGDVWLATLHQSTEDYDQHHEVAAKMLHPIREEHVKIVLEKFNELFFKCQGISSVSWIHGISILNGRICVIMNLYEGSIGDKMARLKEGWISLHDVLRYGISLAQGILELHSKGILVLNLKPCNVLLNDNDQAILGDVGIPNLLLGSSFVSSEIAQRLGTPNYMAPEQWKPEVRGPISLETDSWGFGCTIVEMLTGNQPWYGCSVGGIYGSVVEKHEKPHIPSGLPSPIENILSGCFEYDLRNRPLMVDILRVFKSSLKDLASDVGWIYQGNLKVIPKSGSTDYTEWFLSKDHLQVGDMVRSRKPPNSCKAQNMIVPEGIVVGLERTAEHGFVLVRVHGIHDPIRIHVSTLERVTNGLAAGDWVRVKDKNQKHSPVGILHSINRDHSKAAVGLIGLQTLWNGNSSELEMAESFCVGQFVRPKENVLTPQFDWRRKGCGALATGRISWILPNGCLVVKFPGLVTFGKESNTFLADPSEVEVVDFKTCPGMIEKYQHVEDHHWAVRPVLVALTMFTAFKLGILVGRKVRKCKKINAIVSKNQHVEGQNTNSPTKSTSHGNTTWVPSVANILFKDGA* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3402 637 ProSiteProfiles Protein kinase domain profile. 53 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3402 637 Pfam Protein tyrosine and serine/threonine kinase 53 315 IPR001245 GO:0004672|GO:0006468
Tpr1g3402 637 Gene3D Phosphorylase Kinase; domain 1 32 136 - -
Tpr1g3402 637 Gene3D Transferase(Phosphotransferase) domain 1 139 335 - -
Tpr1g3402 637 PANTHER OS06G0639500 PROTEIN 11 636 - -
Tpr1g3402 637 PANTHER OS06G0639500 PROTEIN 11 636 - -
Tpr1g3402 637 SUPERFAMILY Protein kinase-like (PK-like) 52 317 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3402 Tpr-Chr1 38343553 38347634 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3402 33 324 MAP Kinase Kinase Kinase AT2G17700 25.000 6.56e-21 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Tpr1g3402 PK_Tyr_Ser-Thr 4e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3402 - - gsj:114393396 999.579
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3402 1 38343553 38347634 Tpr1g3402 1 38343553 38347634 ECH