Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3399 ATGAGAAACCATTGGCCACTCTTCAATATTGTAAATACCCTATGGTTATGTTTTTGCATCCTACTTTTCTCTAAAGTAGTTTTGGTTTTGGCTGGTATTCAAATGATTGGAAATATCTCACCTGGATTTTATGGCTCACAAATGAATTGGATTGACAAAAATGGCATGTTTCTTGTATCAAACAAACAAGAATTTGGTTTTGGCTTTGTCAAAACTTCAAATGACAGCACATTATTTCTACTTGCAATAGTCCACACAGACAGCAGCAAAATTGTTTGGACTGCAAACAGAGAATCTCCTGTTTCCAATTCAGACAAATTTGTGTTTGATGAAAAGGGTTTACCATCTCCACAGCCTTATTGGTCTATGCAAAAAGATAACCGAAAAATCGTTAATGAAAATGGCGATGAAGTAGCTTCTGCAACTCTTGATGAAAATTCTTGGAAGTTTTATGACAAAGAGAAATCATTGTTGTCGCAATTTATTATTTCTGATGCTGAAAATTCAATTTGGATTGCAGTTTTAGGAAATGATGGATTTATCACTTTCTATAATCTTCAAAATAGAGGCTCAATTGGTTCATCAAAAACAACAATACCAAAAGATTCTTGTAGTACACCACAACCTTGTGGTCCTTACAACATTTGCAATGGTGAGAAAAAATGTAGTTGTCCATCTTTTCTTAGCTCTAGACGAAGTTGTGAACCGGGTTTTGTTTCGCCTTGTAACTCAAAAAGTTCCATTGAGCTCATGAAAGGTGATGATGGACTTGACTACTTTGCACTTGGATTTCTTCAACCTTCTTCGAAAACCGATTTGATTGGTTGCAAAAATTCTTGTAGTGTAAATTGTTCATGTCTTGCTATGTTCTTCCAAAAAAGTTCAGGTAATTGTTATCTCTTAGACAGGATTGGAAGCTTTGAGAAAACAGATAATGATTCTGGTTTTGTCTCTTACATTAAAGTCTCGAGAGACGGAAGCACTGACACAGACACAGGAGAGAACGGAAACAAGAATAAGCAAATAATAGTTGTTGTGATAATTGTCATAGTAACATTGTTTATCATTGCTGGCATGATCTATGTTGGACTAAAAAACTTAAAGAAAAAGGAAAATCTGTCTGAATCTCCGGAGGAGATTTCAGACGATGACGCCAATTTCTTGGAGGGTTTAACTAGTATGCCAATCCGTTTCAGCTACAACGATCTAGGCACTGCGACTAATAACTTCTCGGAGAAGTTAGGTCAAGGTGGTTTCGGCTCGGTTTATAAAGGAGTACTACAAGATGGAACTCAAATAGCTGTGAAACAGTTAGAAGGAATTGGTCAAGGGAAGAAAGAATTTAGAGTCGAAGTTAGCATCATCGGAAGCATTCATCACCATCATTTGGTAAGGCTTAAAGGGTTTTGTGCTGAAGGGTCTCATAAACTTCTTGTTTATGAATATATGGAAAATGGTTCATTGGATAAATGGATATTCAAGAAAAACAACGAAGAATTATCGTTGGATTGGAACACAAGGTACAATATTGCACTAGGAACAGCTAAAGGACTAGCTTATCTACATGAAGATTGTGATTCAAAGATTGTTCATTGTGATATTAAACCAGAAAATGTGCTTTTAGATAATAACTTTGAAGCCAAAGTTTCGGATTTCGGCCTTGCAAAGCTCATGAACCGCGAACAAAGTCATGTTTTCACAACAATGAGAGGAACAAGAGGTTATTTAGCACCAGAATGGATAACAAACTATGCTATATCAGAGAAAAGTGATGTTTATAGCTATGGAATGGTGTTGTTAGAGATTATTGGTGGAAGGAAAAACTATGATCCTAAAGAAAATTCGGAGAAATCGCATTTTCCTTCTTTTGCTTATAAGATGATGGAACAAGGGAAGATGGAAAATGTAATTGATTCTAAGGTGAAAATGATTGAAAATGATGTGAGAGTTGAGATTGCTTTGAATGTTGCATTTTGGTGTATACAAGAAGATATGTGTTTAAGGCCTTCTATGAATAAAGTTGTACAAATGCTTGAGGGTTTATGTGATGTTCCTAAGTTACCAAATGTGTCTCCATTAGGTTCTCATTTTTATTCAAATTTTCTTAGACCAACAAGTGAGAGTGGCACTTCTTCAGAACCAACAGATGGGAATAGTGATGCATATCTCTCTGCTGTTAGACTTTCGGGGCCAAGATAA 2199 0.3583 MRNHWPLFNIVNTLWLCFCILLFSKVVLVLAGIQMIGNISPGFYGSQMNWIDKNGMFLVSNKQEFGFGFVKTSNDSTLFLLAIVHTDSSKIVWTANRESPVSNSDKFVFDEKGLPSPQPYWSMQKDNRKIVNENGDEVASATLDENSWKFYDKEKSLLSQFIISDAENSIWIAVLGNDGFITFYNLQNRGSIGSSKTTIPKDSCSTPQPCGPYNICNGEKKCSCPSFLSSRRSCEPGFVSPCNSKSSIELMKGDDGLDYFALGFLQPSSKTDLIGCKNSCSVNCSCLAMFFQKSSGNCYLLDRIGSFEKTDNDSGFVSYIKVSRDGSTDTDTGENGNKNKQIIVVVIIVIVTLFIIAGMIYVGLKNLKKKENLSESPEEISDDDANFLEGLTSMPIRFSYNDLGTATNNFSEKLGQGGFGSVYKGVLQDGTQIAVKQLEGIGQGKKEFRVEVSIIGSIHHHHLVRLKGFCAEGSHKLLVYEYMENGSLDKWIFKKNNEELSLDWNTRYNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDNNFEAKVSDFGLAKLMNREQSHVFTTMRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPKENSEKSHFPSFAYKMMEQGKMENVIDSKVKMIENDVRVEIALNVAFWCIQEDMCLRPSMNKVVQMLEGLCDVPKLPNVSPLGSHFYSNFLRPTSESGTSSEPTDGNSDAYLSAVRLSGPR* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3399 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 113 732 - -
Tpr1g3399 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 1 113 - -
Tpr1g3399 732 MobiDBLite consensus disorder prediction 705 719 - -
Tpr1g3399 732 Gene3D Transferase(Phosphotransferase) domain 1 483 684 - -
Tpr1g3399 732 SUPERFAMILY Protein kinase-like (PK-like) 391 679 IPR011009 -
Tpr1g3399 732 Gene3D Phosphorylase Kinase; domain 1 373 482 - -
Tpr1g3399 732 ProSiteProfiles Protein kinase domain profile. 408 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3399 732 Pfam Protein kinase domain 411 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3399 732 PIRSF SRK 106 728 IPR024171 GO:0004674
Tpr1g3399 732 PIRSF SRK 11 114 IPR024171 GO:0004674
Tpr1g3399 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 529 541 IPR008271 GO:0004672|GO:0006468
Tpr1g3399 732 SMART serkin_6 408 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3399 732 MobiDBLite consensus disorder prediction 705 732 - -
Tpr1g3399 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 113 732 - -
Tpr1g3399 732 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 113 - -
Tpr1g3399 732 CDD STKc_IRAK 414 681 - -
Tpr1g3399 732 ProSitePatterns Protein kinases ATP-binding region signature. 414 436 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3399 Tpr-Chr1 38323930 38327657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3399 386 689 Receptor kinase-like Gene Family AT5G20050 46.395 1.15e-90 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Tpr1g3399 Pkinase 6.7e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3399 - - gmx:100787500 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3399 1 38323930 38327657 Tpr1g3399 1 38323930 38327657 ECH
Tpr7g0643 7 5674736 5678079 Tpr1g3399 1 38323930 38327657 ECH
Tpr1g3399 1 38323930 38327657 Tpr7g0643 7 5674736 5678079 PCT