Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3393 ATGTCCTTAATAGCAGAAGCACCAGAGTTTCTTCAAGTGTTCTCAGATGGAACAGTGAAACGTTTCAATCCAGAAATATCACCACCATCATTAGATTCATCAAAAAAATACAAATCAAAAGACATAATCATTGACTCATCAAAACCCATCACAGGAAGAATCTTCATTCCCAATAATATTCCCCCAAAAAAACACCTACCCCTCCTAGTTTATTTCCATGGTGGTGGCTTCTGCATTGGTTCAACAACATGGCTCGGTTACCACACGTTCCTCGGAGATTTCTCAGTTGCAACACAATCCATTGTTGTCTCTGTTGATTACCGGTTAGCGCCAGAGCACCGTCTTCCAACTGCTTATGTAGATTGTTACTCTTCTCTTGAATGGATTTATGAAAATGTAAAAATTGAACCTTTTCTACGACATGCTGATTTATCAAATGTGTTTCTTTCTGGTGATAGTGCTGGTGGTAACATTTCACATTATGTTGCTGTTAAAGCTGTTCAAAATAATGGGTTTTGTCCTGTGAAAATTAAAGGGGTTATGCTTATTCATCCTTATTTTGGGAGTGAGAAAAGGACTGAGAAAGAGATGGAGGAAGAAGGTTTTGAAGAAGTTAGAATGAATGATATGTTTTGGAAATTGAGTTTGCCTGAAGATTCGAACCGCGATTTTTATGGTTGTAATTTTGAGAAAGATGAGGTTTCTGAGAGTATTTGGTTGAAGTTTCCTGCTATTGAGGTTTATGTTGCTGGTAAGGATTTTTTGAAGGAAAGAGGTGTTATGTATGCTGAATTTGTGAAGAAGAAAGGAGTGAGAGTTGTTAAGGTTGTCGAAGCTGAAGAAGAGAAACATGTTTTTCATGTTTTTTATCCTGAATCTGATGCAACTAGGTTGCTTCAAAACCAAATGAGTCAGTTCATGAAGAGATATTTGAATTAA 939 0.3685 MSLIAEAPEFLQVFSDGTVKRFNPEISPPSLDSSKKYKSKDIIIDSSKPITGRIFIPNNIPPKKHLPLLVYFHGGGFCIGSTTWLGYHTFLGDFSVATQSIVVSVDYRLAPEHRLPTAYVDCYSSLEWIYENVKIEPFLRHADLSNVFLSGDSAGGNISHYVAVKAVQNNGFCPVKIKGVMLIHPYFGSEKRTEKEMEEEGFEEVRMNDMFWKLSLPEDSNRDFYGCNFEKDEVSESIWLKFPAIEVYVAGKDFLKERGVMYAEFVKKKGVRVVKVVEAEEEKHVFHVFYPESDATRLLQNQMSQFMKRYLN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3393 312 Gene3D alpha/beta hydrolase 11 311 IPR029058 -
Tpr1g3393 312 Pfam alpha/beta hydrolase fold 69 287 IPR013094 GO:0016787
Tpr1g3393 312 PANTHER CARBOXYLESTERASE 13-RELATED 5 307 - -
Tpr1g3393 312 SUPERFAMILY alpha/beta-Hydrolases 24 311 IPR029058 -
Tpr1g3393 312 PANTHER ARYLACETAMIDE DEACETYLASE 5 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3393 Tpr-Chr1 38274127 38275171 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3393 3 312 Carbohydrate Esterase AT5G16080 36.308 4.09e-62 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3393 - - cam:105852007 478.404