Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3384 ATGGCAAAGAAGAAGAACCCCATGGTGTTTATGAATGTGTCTATAGATGGGGATCCGGGTGAAACAATGGTTTTTGAGCTTTTCTATGATGTTGCTCCAAAGACTGCTGAAAATTTCCGTGCACTGTGTACTGGAGAAAGAGGAGTCAGCCCCAATACTGGAAAAGCACTGCACTATAAGGGTTCTTTCTTCCATCAGATTGTAAAAGGCTCTATTGTTAGGGGTGGTGATTTTATCAATCGAAATGGGACTGGTGGTGAAAGCATATACCCCAAGTTCCCAGACGAGTCTCCTAGGCTAAAGCATGATTCTCCTGGCCTTCTATCCATGGCAATTGCTGACCGTGACACCCTCGGTTCACATTTTATCATCACTTTGAAAGCTGATCACCATCTTGATAGGAAGTATGTGGTTTTTGGCAAGCTTGTGCAAGGTTATGATATCTTGAAGAAAATTGAAGATGTAGGCGATGAAGAAGGACTCCCAACCGTAACTGTTAAAATAATTAATTGTGGTGAACTTAATGAGGATACAAAGAAGACACACAAGTTAAAAATTGGAAGGAACAGATCTTCTGAAAGGAAGGGAAAGCATAAAAAATCTTCAGGAGACAGAAGGAAAAAGAGAAAACATTACTCATCAGAATCAGATAGTTCCTCAGATTCCGACATTGAATCTTCATCAAGTGAATCTTCATTAAGTGAGAGTGACTCTGACTCAGATGTGTCCTCGTCATCTTACACAAGCTCATCTAGTGATGACAGGCGGAGGAAAAGAAAGAGATCTAGGAAAGATAAACGTAGACATGGAAAAAGGAGAGATAAACGTCGAGAAAAGCGGCGAAGAAAACAAGATAAGAGATCAAAACGTAAATCAAGGAGGGAATCAAGCAGTCGTACTGATGCAGATATTGCAAGTAAGATTGACGATAGCTCCAATGGCAAAGGTCTTGATACTCAAGGGATAATTCCGAAGCATAAAGATCATTCTCAGAGAGATGCTGAAGTCCAGTCATCTTCAGTTTTGGAGAAAGAATTGCCTCCCATGAGTCATAAAAGGAGGGAGGGGGATGACATGCTAGGGGAGGAAGAATTCCCAAAAGAAAACGGAGCGCAGCATAGCAACGGCATTGGGGTCAACTATAGACCTGACAGAAGTGAAGAGAGGCAGCCTGATGTGATGGATGATAATCCAGGAAAATCTAGGAGTCGAAGCATGAGCCCTAAGCAAACTGTGAGCAAGAGTATGAGTATTAGTCCCAAGTGTGTGTGCAAAAGCCCAAGCATTAGTCCAAAAGGGAGGTTGAGCAGAAGTCCAAGTGGTAGTAAGAGCCCACATGCTCCATCACGGAGGAGTTTGAGCAGGAGTCCTGTTAGAAGCATCAGCAGAAGCCCTTTGAGAGGGAGGAAGGGGAGAAGTATCAGTAGAAGCCCTATAAGAACACACATTCATAGAAGTGTCAGCAAGAGCCCTGTGAGAATGTCAAGAAAGAGCATCAGCAGGAGTCCAATTAGATCGTCTGCTAGAAGCCTCAGCAGAAGTTCTGGCCGAGTTCCTTTGAGAAACATTAGCCGAAGTCCTGTCAGAATGGCAAACAGAGGCAATCACCGCAGCTATTCCAGGAGTCGTAGTCCTGTTCGTAGTAGGGAAAGGACAACTCGTGAGAGGAGTCTGTCAAGGAGTGTGTCACCTGATGCTTCACCAAAACGTATCAGGAGGGGAAGAGGTTTCAGTGAACAATACTCTTATGCTAGAAGATACAGAACACCCTCTCAGTCTCCTGTGAGGTACCGCTATAATGGAAGGAATGACCGGGACAGATATTCAGGATACAGAAGGTACTCCCCTAGACGTTTTAGGAGCCCACCGCCACGAAGAAGAACTCCTCCACCAAGGTACCGAAGTAGGAGAAGCAGGACACCATCTGTATCACGCAGCCCACCTTACCGAGCACGTCGGTATAGCCCAAGCCCCAGCCCCAGCCCCAGCCCAAGCCCCAGCCCAGTTCGCAACCGCTCACCTGCTCGTAAGGATAGGCGCATGTCATTATCTCCCAGCAGGAGTCCATCTCGATCCAGGTCCAGGTCTCCAGTGGAATCACAGTCTCCAAAAAAGGCAAGCAGAGATAGGTCAAGGTCTTCCTCTAGAAGCTCAGATGGAAAGAAAGGCCTGGTCTCGTATGGAAATGGCTCTCCTGATTCACTTGATAGGTGA 2214 0.458 MAKKKNPMVFMNVSIDGDPGETMVFELFYDVAPKTAENFRALCTGERGVSPNTGKALHYKGSFFHQIVKGSIVRGGDFINRNGTGGESIYPKFPDESPRLKHDSPGLLSMAIADRDTLGSHFIITLKADHHLDRKYVVFGKLVQGYDILKKIEDVGDEEGLPTVTVKIINCGELNEDTKKTHKLKIGRNRSSERKGKHKKSSGDRRKKRKHYSSESDSSSDSDIESSSSESSLSESDSDSDVSSSSYTSSSSDDRRRKRKRSRKDKRRHGKRRDKRREKRRRKQDKRSKRKSRRESSSRTDADIASKIDDSSNGKGLDTQGIIPKHKDHSQRDAEVQSSSVLEKELPPMSHKRREGDDMLGEEEFPKENGAQHSNGIGVNYRPDRSEERQPDVMDDNPGKSRSRSMSPKQTVSKSMSISPKCVCKSPSISPKGRLSRSPSGSKSPHAPSRRSLSRSPVRSISRSPLRGRKGRSISRSPIRTHIHRSVSKSPVRMSRKSISRSPIRSSARSLSRSSGRVPLRNISRSPVRMANRGNHRSYSRSRSPVRSRERTTRERSLSRSVSPDASPKRIRRGRGFSEQYSYARRYRTPSQSPVRYRYNGRNDRDRYSGYRRYSPRRFRSPPPRRRTPPPRYRSRRSRTPSVSRSPPYRARRYSPSPSPSPSPSPSPVRNRSPARKDRRMSLSPSRSPSRSRSRSPVESQSPKKASRDRSRSSSRSSDGKKGLVSYGNGSPDSLDR* 738
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3384 737 MobiDBLite consensus disorder prediction 184 207 - -
Tpr1g3384 737 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 172 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 MobiDBLite consensus disorder prediction 180 737 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 256 293 - -
Tpr1g3384 737 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 173 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 SUPERFAMILY Cyclophilin-like 4 179 IPR029000 -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 465 491 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 702 717 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 543 558 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 382 399 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 685 701 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 431 461 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 653 669 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 618 634 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 400 424 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 294 308 - -
Tpr1g3384 737 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 106 121 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 121 133 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 134 149 IPR002130 GO:0000413|GO:0003755
Tpr1g3384 737 MobiDBLite consensus disorder prediction 584 598 - -
Tpr1g3384 737 Gene3D - 1 175 IPR029000 -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 219 250 - -
Tpr1g3384 737 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 355 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 346 369 - -
Tpr1g3384 737 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP63 1 355 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 599 613 - -
Tpr1g3384 737 MobiDBLite consensus disorder prediction 492 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3384 Tpr-Chr1 38202704 38210258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3384 25 169 U-box Gene Family AT5G67530 39.189 2.13e-18 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3384 K09566 - jre:109001815 534.258
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3384 1 38202704 38210258 Tpr1g3384 1 38202704 38210258 ECH