Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3379 ATGGGACCATTTAGTGGAATAAAACAAGATTTCAATGGAAGACGTGAAGTTTATAAACAAGATTGGACTTGTGCAGTCTCTACTGGCCTTAGAATATTTGCCCCAACTTTCTACATATTTTTTGCTTCTGCACTTCCTGTTATTGCTTTTGGAGAGCAACTTAATAGAGATACAGATGGAACTTTGAGCACAGTTGAAACATTGACATCTACGGCTATGTGTGGAATTATCCATTCGATATTTGGTGGTCAACCTTTGTTGATTTTAGGAGTTGCTGAACCAACTGTTATCATGTATACCATTCTATACAGTTTTTGCTCAAGAAGACCAGAATTAGGTCCCAAGCTGTTTTTGGCTTGGGCTGGTTGGGTTTGTGTCTGGACATCATTCTTGTTGATTCTGCTTGCGGTTTTCAATGCGTGTACAATTATCAGTAGGTTTACTAGGCTTGCAGAGGAATTATTTGGCACGCTAATTACTGTGCTTTTCTTTCAAGAGGCTGTAGAGGGACTCATAAGTGAGTTCAAGATACCAAAGGATGCAAATCCCTCGTTAGAGGAATATCAATTCCATTGGCGGTATACAAATGGATTACTTTCAATCATTTTCTTTTTTGGGTTACTTTTCACTGCCATCCTAAGCAGAAGAGCAAGAAAATGGCGATATGGAACAGGGTGGATACGAGGTATCATTGCAGATTATGGAGTTCCACTGATGGTAGTGTTTTGGACTATACTATCTTATACCGTACCTAGCAAAGTTCCATCTGATGTTCCTAGAAGATTGTTTTGTAAACTGCCTTGGGAAGCTGCATCTCTCTACCACTGGACAGTAGTTAAGGATATGGGAAAGGTACCGTTGCCATTTATCTTTGGAGCATTTATTCCAGCAGTGATGATAGCAGGTTTATACTTTTTCGATCATAGTGTAGCTTCAAAGTTGGCTCAACAGAAGGACTTTAACCTTCAAAAACCATCTGCTTACCACTATGATATTTTACTTCTTGGAATAATGACGTTTATTTGCGGTATTCTTGGTCTTCCTCCAGCAAATGGAGTCCTTCCTCAGTCCCCTATGCATACAAAGAGTTTAGCAATTCTTAGGAGGCAGATGATCCGAAAGAAGGTGGTGAAGAGTGCTAAGGAATGCATTAGGCAACAAGGAAGTACCTCTGAGTTATACGGAACGATGCGAGCTGTGTTTATAGAAATGGATGCCGCACCTACCGTTAAAGAGTTGGAATGTCTGAAGGAAGCTGTAATGAAAACTAATGAAAAGAGTGGTACAAAGGAAAAATTTGATCCTATTAAACATATAGATGCTTATTTGCCTGTTAGAGTTAATGAGCAAAGAATGAGCAACTTATTGCAGTCTCTACTTGTTGCTCTATCACTTTTAGCTATTTCTATCATCAGAAAGATACCTAGCTCAGTTCTTTGGGGATATTTTGCTTATATGGCAATTGATAGTCTTTATGGGAATCAATTCTGGGAAAGGTTATTGCTTCTCTTCATCACCCCAAAAAGGCACTACAAAATTTTGGAAGGCTCTCATGCCTCATTTTTTGAGTCAGTACCATACCAGATAATAGCTGCATTTACAGGTTTACAGTTTCTATATTTTGTAATCTGTTATGGTTTGACATGGATACCTATTGGTGGAATATTGTTTCCATTACCTTTCTTCCTTCTCATAACTATAAGAGAGAAATTGCTTCCAAGATTATTCAAGGCAAATCATCTTCAGGAATTAGATGCTTCTGAGTATGAGGAAATTATTGGTGCTCCACTCGGACCCTATAATATACCACTACTAGAAAACGATGGACTAGCTAGTTCCGACAATCATGATACTTCAGAAGAAGATTATTATGATGCAGAGATATTGGATGAGATGACAACTTTTAGGGGAGAATTGAAATTTAGAACAGTGAACCAAAATGATAATAGCAGAAGCTTCAACCGTAGCTTCACTTATGGTTTCAATGAAGACAGACACGTTCAGGTTTACCCTGAATATCAATAA 2025 0.3827 MGPFSGIKQDFNGRREVYKQDWTCAVSTGLRIFAPTFYIFFASALPVIAFGEQLNRDTDGTLSTVETLTSTAMCGIIHSIFGGQPLLILGVAEPTVIMYTILYSFCSRRPELGPKLFLAWAGWVCVWTSFLLILLAVFNACTIISRFTRLAEELFGTLITVLFFQEAVEGLISEFKIPKDANPSLEEYQFHWRYTNGLLSIIFFFGLLFTAILSRRARKWRYGTGWIRGIIADYGVPLMVVFWTILSYTVPSKVPSDVPRRLFCKLPWEAASLYHWTVVKDMGKVPLPFIFGAFIPAVMIAGLYFFDHSVASKLAQQKDFNLQKPSAYHYDILLLGIMTFICGILGLPPANGVLPQSPMHTKSLAILRRQMIRKKVVKSAKECIRQQGSTSELYGTMRAVFIEMDAAPTVKELECLKEAVMKTNEKSGTKEKFDPIKHIDAYLPVRVNEQRMSNLLQSLLVALSLLAISIIRKIPSSVLWGYFAYMAIDSLYGNQFWERLLLLFITPKRHYKILEGSHASFFESVPYQIIAAFTGLQFLYFVICYGLTWIPIGGILFPLPFFLLITIREKLLPRLFKANHLQELDASEYEEIIGAPLGPYNIPLLENDGLASSDNHDTSEEDYYDAEILDEMTTFRGELKFRTVNQNDNSRSFNRSFTYGFNEDRHVQVYPEYQ* 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3379 674 Pfam HCO3- transporter family 445 534 IPR011531 GO:0006820|GO:0016021
Tpr1g3379 674 Pfam HCO3- transporter family 186 370 IPR011531 GO:0006820|GO:0016021
Tpr1g3379 674 Pfam HCO3- transporter family 3 176 IPR011531 GO:0006820|GO:0016021
Tpr1g3379 674 Gene3D Helical hairpin bin 14 56 - -
Tpr1g3379 674 PANTHER ANION EXCHANGE PROTEIN 2 651 IPR003020 GO:0005452|GO:0006820|GO:0016020
Tpr1g3379 674 PANTHER BORON TRANSPORTER 6-RELATED 2 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3379 Tpr-Chr1 38166208 38175154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3379 2 645 Antiporters AT5G25430 65.794 0.0 894
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3379 K24194 - gmx:100787412 983.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3379 1 38166208 38175154 Tpr1g3379 1 38166208 38175154 ECH
Tpr7g0601 7 5183536 5187946 Tpr1g3379 1 38166208 38175154 ECH
Tpr1g3379 1 38166208 38175154 Tpr7g0601 7 5183536 5187946 PCT