Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3373 | ATGTCTAGCTCTGCAATCATTGCGGCGCATTCTAGCTCTTGGGCTGCAGCACTCGTTAGGATCTCTCCATACACCTTTTCCGCAATCGGAATCGCCGTCTCAATCGGTGTCTCCGTTCTCGGCGCTGCTTGGGGAATTTACATCACCGGTAGTAGCTTGATCGGTGCTGCAATCAAAGCTCCCAGAATCACTTCCAAAAATCTCATTAGTGTAATCTTCTGTGAAGCTGTTGCTATATATGGTGTTATTGTGGCTATTATCCTGCAGACAAAATTAGAAAGCGTTCCAAAAGCAAGTATCTATGAACCAGAATCTCTTAGAGCTGGATATGCAATCTTTGCTTCTGGACTTATCGTGGGCTTCGCAAATCTTGTTTGCGGGTTGTGTGTAGGAATAATCGGAAGCAGCTGCGCATTGTCTGATGCTCAGAACTCCTCTCTCTTTGTGAAAATTCTTGTGATCGAGATCTTCGGCAGCGCGCTTGGCCTATTTGGAGTTATTGTTGGAATTATTATGTCAGCTCAAGCAACATGGCCCTCAAAATTTTAG | 549 | 0.4499 | MSSSAIIAAHSSSWAAALVRISPYTFSAIGIAVSIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPKASIYEPESLRAGYAIFASGLIVGFANLVCGLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKF* | 183 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3373 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 42 | 66 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Tpr1g3373 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 68 | 92 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Tpr1g3373 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 124 | 150 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Tpr1g3373 | 182 | PRINTS | Vacuolar ATP synthase 16kDa subunit signature | 151 | 174 | IPR000245 | GO:0033179|GO:0046961|GO:1902600 | |
Tpr1g3373 | 182 | SUPERFAMILY | F1F0 ATP synthase subunit C | 22 | 91 | IPR035921 | - | |
Tpr1g3373 | 182 | Pfam | ATP synthase subunit C | 113 | 172 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Tpr1g3373 | 182 | Pfam | ATP synthase subunit C | 29 | 88 | IPR002379 | GO:0015078|GO:0033177|GO:1902600 | |
Tpr1g3373 | 182 | CDD | ATP-synt_Vo_c_ATP6F_rpt2 | 108 | 172 | - | - | |
Tpr1g3373 | 182 | PANTHER | V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT | 7 | 180 | - | - | |
Tpr1g3373 | 182 | Gene3D | - | 24 | 178 | IPR035921 | - | |
Tpr1g3373 | 182 | SUPERFAMILY | F1F0 ATP synthase subunit C | 105 | 173 | IPR035921 | - | |
Tpr1g3373 | 182 | CDD | ATP-synt_Vo_c_ATP6F_rpt1 | 26 | 88 | - | - | |
Tpr1g3373 | 182 | PANTHER | V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT | 7 | 180 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3373 | 7 | 181 | Primary Pumps ATPases(2) | AT2G25610 | 91.429 | 3.69e-111 | 314 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3373 | K03661 | - | oeu:111367338 | 309.301 |