Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3345 ATGGCATACCAAAACCCTCCTTCAATTCAAACCTCAGATGTTGAAGCTCCTGAAATCACTCCAACAGCTCAAACAAACCATTCACAAGAAACTAAAAGTTTCACAGCCAAATATGCAGTTCACAAAGTGAAACAAAACTTGATTTTTCGTTCGAAATGGGCTGAAATTAATGGTGCCATGGGTGACCTTGGCACCTATATACCTATAGTGCTTGCTCTCACTCTAGCTAAGGACCTTAACCTTGGCACCACATTGATTTTCAATGGTATCTACAACATCATAACCGGTGTCATTTATGGGATCCCTATGCCAGTCCAACCGATGAAGTCCATCGCGGCTCAGGCCTTATCAGACAAAGATTTCGGAATACCGGAGATCATGACTGCTGGAATCTTAACCGGCGGCACGTTGTTCATACTTGGGATCACAGGATTAATGCAGCTAGTGTACAAAATAATTCCTTTATCAGTTGTGAGAGGAATTCAATTAGCACAAGGTTTGTCATTTGCTTTAACAGCTGTTAAATATGTAAGAAAAGTGCAAGATCTTCCAAAGTCTAAATCTTTAGGCCAAAGACCTTGGTTTGGTTTAGATGGATTGGTTCTAGCTATTGTTTGTGCTTGTTTCATTGTGATAGTGAATGGAGCTGGCGAAAAAAATCGCGGCTGTTGCGGTGATCCACAAAGTGATAATTTAGATGGCCAAACCCAAAAGAGTGATAATGATAATCAAAGTGGAAGAAAAAGTAAAATCAATAGTTTGAGAAAAATTGTTTTTTCACTTCCTTCTGCTTTATTAGTCTTTGTGTTGGGAATTGTCTTGGTGTTTATAAGAAAGCATGAAGTTATACATGAAATTAAATTTGGACCCTCTTCAATAGAAGTAGTGAAATTCACTAAACATGCATGGAAGAAAGGTTTTATCAAAGGTGCAATTCCTCAACTTCCATTATCAATTTTGAACTCTGTGATAGCTGTTTGTAAATTATCAACAGATCTTTTTCCTGAAAAGGAATTTTCAGTTACATCAATTTCAGTTACAGTTGGATTAATGAATTTAGTTGGTTCATGGTTTGGTGCTATGCCAACATGTCATGGTGCTGGTGGATTAGCAGGACAGTATAAATTTGGTGGACGGAGTGGAGGATGTGTGGCACTTCTTGGTGTTGCAAAATTGGTATTAGGATTGGTTTTAGGTACTTCTTTGGCACATATATTGAAGATGTTTCCTGTTGGAATATTAGGAGTGTTACTTTTGTTTGCTGGTATTGAATTAGCTATGTGTGCTAGAGATATGAATAGTAAAGAAGATTCATTTGTTGCACTTATTTGTACTGCTGTTTCATTGGTTGGATCAAGTGCTGCTCTTGGATTTTTGGTTGGAATGATTGTTTATGTCATTCTTAAGTTAAGGAATTGGACAACTGATAAACCACTTTCTACTATTTGGAACCAGAAAAGTCCAAATTAA 1470 0.3728 MAYQNPPSIQTSDVEAPEITPTAQTNHSQETKSFTAKYAVHKVKQNLIFRSKWAEINGAMGDLGTYIPIVLALTLAKDLNLGTTLIFNGIYNIITGVIYGIPMPVQPMKSIAAQALSDKDFGIPEIMTAGILTGGTLFILGITGLMQLVYKIIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGQRPWFGLDGLVLAIVCACFIVIVNGAGEKNRGCCGDPQSDNLDGQTQKSDNDNQSGRKSKINSLRKIVFSLPSALLVFVLGIVLVFIRKHEVIHEIKFGPSSIEVVKFTKHAWKKGFIKGAIPQLPLSILNSVIAVCKLSTDLFPEKEFSVTSISVTVGLMNLVGSWFGAMPTCHGAGGLAGQYKFGGRSGGCVALLGVAKLVLGLVLGTSLAHILKMFPVGILGVLLLFAGIELAMCARDMNSKEDSFVALICTAVSLVGSSAALGFLVGMIVYVILKLRNWTTDKPLSTIWNQKSPN* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3345 489 Pfam Molybdate transporter of MFS superfamily 307 425 IPR031563 GO:0015098|GO:0015689
Tpr1g3345 489 Pfam Molybdate transporter of MFS superfamily 54 169 IPR031563 GO:0015098|GO:0015689
Tpr1g3345 489 MobiDBLite consensus disorder prediction 1 30 - -
Tpr1g3345 489 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 30 486 - -
Tpr1g3345 489 PANTHER - 30 486 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3345 Tpr-Chr1 37808967 37811508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3345 20 480 Inorganic Solute Cotransporters AT2G25680 64.871 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3345 - - gmx:100784982 750.74