Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3344 ATGGCATACCAAAACCATAATCCTTCAATTCAAACCTCAGATGTTGAAGCTCCTGAAATCACTCCAACAAACCATTCACAAGAAACTAAAAGTTTCACAGCAAAATATGCAGTTCACAAAGTGAAACAAAACTTGATTTTTCGATCAAAATGGGCTGAAATTAATGGTGCCATGGGTGACCTTGGCACCTATATACCTATAGTGCTTGCTCTCACTCTAGCTAAGGACCTTAACCTTGGCACCACATTGATTTTCAATGGTATCTACAACATCATAACCGGTGTCATTTATGGGATCCCTATGCCAGTCCAACCGATGAAGTCCATCGCGGCTCAGGCCTTATCCGACAAAGATTTCGGAATACCGGAGATCATGACTGCTGGAATCTTAACCGGCGGCACGTTGTTCATACTTGGGATCACAGGATTAATGCAGCTAGTGTACAAAATAATTCCTTTATCAGTTGTGAGAGGAATTCAATTAGCACAAGGTTTGTCATTTGCTTTAACAGCTGTTAAATATGTAAGAAAAGTGCAAGATCTTCCAAAGTCTAAATCTTTAGGCCAAAGACCTTGGTTTGGTTTAGATGGATTGGTTCTAGCTATTGTTTGTGCTTGTTTCATTGTGATAGTGAATGGAGCTGGCGAAAAAAATCGCGGCTGTTGCGGTGATCCACAAAGTGATAATTTAGATGGCCAAACCCAAAAGAGTGATAATGAAAGTGGAAGAAAAAGTAAGATGAATAGATTAAGAAAAATTGTTTTTTCACTTCCTTCTGCTTTATTAGTCTTTGTTTTGGGAATTGTTTTGGTGTTTATAAGAAAGCATGAAGTTATACATGAAATTAAATTTGGACCCTCTTCGATAGAAGTAGTGAAATTCACTAAACATGCATGGAAAAAAGGTTTTATTAAGGGTGCAATTCCACAACTTCCATTATCAGTTTTGAACTCTGTGATAGCTGTTTGTAAATTATCAACAGATCTTTTTCCTGAAAAGGAATTTTCAGTTACATCAATTTCAGTTACAGTTGGATTAATGAATTTAGTTGGTTCATGGTTTGGTGCTATGCCAACATGTCATGGTGCTGGTGGATTAGCAGGACAGTATAAATTTGGTGGAAGAAGTGGAGGGTGTGTGGCACTTCTTGGTGTTGCAAAATTGGTATTAGGATTGGTTTTAGGTACTTCTTTGGCACATATATTGAAGATGTTTCCTGTTGGAATATTAGGAGTGTTACTTTTGTTTGCTGGTATTGAATTAGCTATGTGTGCTAGAGATATGAATAGTAAAGAAGATTCATTTGTTGCACTTATTTGTACTGCTGTTTCATTGGTTGGATCAAGTGCTGCTCTTGGATTTTTGGTTGGAATGATTGTTTATGTCATTCTTAAGTTAAGGAATTGGACTAGTGATAAATCACTTTCTTGCATTTGGAACCAGAAAAGTCCAAATTAA 1458 0.3697 MAYQNHNPSIQTSDVEAPEITPTNHSQETKSFTAKYAVHKVKQNLIFRSKWAEINGAMGDLGTYIPIVLALTLAKDLNLGTTLIFNGIYNIITGVIYGIPMPVQPMKSIAAQALSDKDFGIPEIMTAGILTGGTLFILGITGLMQLVYKIIPLSVVRGIQLAQGLSFALTAVKYVRKVQDLPKSKSLGQRPWFGLDGLVLAIVCACFIVIVNGAGEKNRGCCGDPQSDNLDGQTQKSDNESGRKSKMNRLRKIVFSLPSALLVFVLGIVLVFIRKHEVIHEIKFGPSSIEVVKFTKHAWKKGFIKGAIPQLPLSVLNSVIAVCKLSTDLFPEKEFSVTSISVTVGLMNLVGSWFGAMPTCHGAGGLAGQYKFGGRSGGCVALLGVAKLVLGLVLGTSLAHILKMFPVGILGVLLLFAGIELAMCARDMNSKEDSFVALICTAVSLVGSSAALGFLVGMIVYVILKLRNWTSDKSLSCIWNQKSPN* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3344 485 PANTHER - 28 482 IPR031563 GO:0015098|GO:0015689
Tpr1g3344 485 Pfam Molybdate transporter of MFS superfamily 303 421 IPR031563 GO:0015098|GO:0015689
Tpr1g3344 485 Pfam Molybdate transporter of MFS superfamily 52 167 IPR031563 GO:0015098|GO:0015689
Tpr1g3344 485 MobiDBLite consensus disorder prediction 1 26 - -
Tpr1g3344 485 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 28 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3344 Tpr-Chr1 37771730 37774405 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3344 24 476 Inorganic Solute Cotransporters AT2G25680 66.009 0.0 595
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3344 - - gmx:100779658 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3344 1 37771730 37774405 Tpr7g0542 7 4601531 4603575 PCT