Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3301 ATGGCAAGCATCAATCAAGAACAGCTGAAGAACGAGAACGTCAATTTGGAACGGATTCCATTGGAGGAAGTGTTTGAACACCTGAAATGCTCTCGAGAAGGTCTAACCTCCGATGAAGGAGCCAACAGGCTCCAAGCATTTGGGCCAAATAAGCTTGAAGAAATTAAGGATAGCAAGTTTCTTAAATTTTTGGGTTTTATGTGGAACCCTTTGTCATGGGTTATGGAGGTTGCTGCCATCATGGCGATTGCTCTGGCGAACGGTGGAGGAAAGCCTCCGGACTGGCAAGATTTCGTTGGAATTGTTGTTCTCTTAGTGGTCAACTCGACAATCAGTTTCATCGAAGAGAACAATGCTGGCAATGCTGCGGCCGCTCTTATGGCTGGATTAGCTCCAAAGACAAAGGTGCTAAGAGACGGAAAATGGAGTGAGCAAGATGCGGCAATTTTGGTACCAGGAGACATTATCAGCATCAAGTTGGGAGACATTATTCCTGCTGATGCAAGACTTCTAGAGGGTGATTCTTTAAGCGTGGACCAGTCTGCATTAACAGGAGAATCACTTCCTGTGACAAAGTGTGCAACTCAAGAAGTGTTTTCAGGATCAACCGTGAAAAAGGGAGAAATTGAAGCAGTTGTGTATGCCACTGGTGTGCACACGTTTTTTGGAAAAGCGGCGCATTTGGTGGATAGTACAAACCAGGTAGGACATTTCCAGAAAGTGCTAACAGCTATCGGCAACTTCTGCATTTGTTCAATTGCGGTTGGAATAGTTGTTGAGCTCATTGTGATGTATCCGATTCAACACCGCAAGTATAGAGACGGAATTGACAATCTTTTGGTGCTATTGATCGGCGGAATTCCAATTGCTATGCCAACTGTTTTGTCTGTTACTATGGCTATCGGTTCTCATAGGCTCTCGCAGCAAGGTGCAATCACAAAAAGAATGACTGCTATTGAGGAAATGGCTGGAATGGATGTTTTGTGCAGTGATAAAACTGGAACTCTCACTCTGAATAAGCTTAGTGTTGACAAAAACTTGATTGAGGTGTTTGCTAGAGGTGTTGATAAGGACCATGTGATACTTCTAGCTGCAAGAGCTTCTCGGATAGAAAATCAGGATGCTATTGATGCTGCGATTGTTGGAATGCTTTCTGATCCACAAGAGGCTAGAGCTGATATCAACGAGGTGCACTTTCTTCCGTTCAATCCAGTAGATAAGAGGACTGCTCTTACCTATGTTGATGCTGATGGAAATTGGCATAGAGCTAGCAAAGGAGCTCCTGAACAGATATTGGAACTCTGCAACTGCAGAGAGAATGTGACGAGAAAGGCTCATGCAGTGATTGATAGGTTTGCTGAGCGTGGACTAAGATCTTTAGGTGTTGCTTATCAAGTAATACCGGAGAAATCAAAAGACAGTCCTGGGGCTCCATGGCAGTTCGTTGGATTATTGCCCTTATTCGATCCCCCAAGGCATGACAGTGCTGAAACCATTAGAAGAGCACTGAGCCTTGGCGTGAATGTTAAGATGATTACTGGGGACCAACTTGCCATCGGAAAGGAAACAGGCAGAAGACTTGGAATGGGAACGAACATGTATCCATCATCTGCATTGCTTGGAGAAGGTTCTTCTAATTCAGATGTTCCTATTGACGAGTTGATCGAGAAAGCTGATGGGTTTGCTGGAGTATTTCCCGAGCACAAATATGAAATCGTTAGAAGGCTTCAAGAGAGGAAGCATATATGTGGCATGACTGGTGATGGTGTAAACGACGCACCAGCGTTGAAGAGAGCTGATATCGGAATTGCTGTTGCTGATGCTACAGATGCTGCTAGAAGTGCTTCCGATATTGTTCTCACTGAACCTGGTTTGAGTGTGATTATCAGTGCTGTGCTCACCAGCAGGGCCATTTTCCAAAGAATGAAGAACTATACAATTTATGCTGTGTCCATCACCATTCGTATCGTGTTTGGTTTCATGTTAATTGCTTTGATCTGGAAATTTGATTTTTCACCCTTCATGGTTCTGATAATTGCAATACTGAATGATGGTACTATAATGACAATTTCAAAGGATAGAGTGAAACCATCTCCACTACCCGACAGTTGGAAACTAAAGGAGATATTTGCCACTGGTATTGTGCTTGGCAGTTACATGGCACTGATGACAGTCCTATTTTTCTGGGCGGCTAAAGATACCGACTTTTTCTCGGACAAGTTTGGTGTGAGATCTCTAAGAAATAATCCTAATGAAATGATGGCAGCTTTGTACTTACAAGTCAGTATCATAAGCCAAGCACTAATTTTTGTGACCAGGTCTCGCAATTGGTCTTTCTTCGAAAGACCTGGCCTTTTACTACTCGCTGCTTTTTTCATTGCTCAATTGATTGCAACAGTTATAGCAGTGTATGCTCATTGGGAATTTGCAAGAATTAAGGGAATGGGATGGGGTTGGGCTGGTGTTATCTGGTTGTACAGTTTGGTAACTTATCTCCCTCTTGATTTGCTCAAAATCGCAATCCGCTATATTCTGAGCGGAAAGGCGTGGGATAATCTTTTGGAAAACAAGACTGCCTTCACTACCAAGAAAGATTATGGCAGAGAAGAGAGGGAAGCGCAATGGGCGGCAGCACAGAGATCACTTCATGGTCTTCAAGCTTCTACCTCTAACAACAACATTTTCAATGAAACCACTAGTTACCGCGAACTATCAGAAATCGCTGAACAGGCAATGAGGCGTGCAGAAGTTGCCCGGCTCATGGAGAAGAATACCTTGAAGGGGCGTGTTGAGTCGGTCGTCAAGCTTAAAGGATTAGATCTTGATACCTCCAAGCATCATTATACAATCTAA 2853 0.436 MASINQEQLKNENVNLERIPLEEVFEHLKCSREGLTSDEGANRLQAFGPNKLEEIKDSKFLKFLGFMWNPLSWVMEVAAIMAIALANGGGKPPDWQDFVGIVVLLVVNSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQDAAILVPGDIISIKLGDIIPADARLLEGDSLSVDQSALTGESLPVTKCATQEVFSGSTVKKGEIEAVVYATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVVELIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFARGVDKDHVILLAARASRIENQDAIDAAIVGMLSDPQEARADINEVHFLPFNPVDKRTALTYVDADGNWHRASKGAPEQILELCNCRENVTRKAHAVIDRFAERGLRSLGVAYQVIPEKSKDSPGAPWQFVGLLPLFDPPRHDSAETIRRALSLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGEGSSNSDVPIDELIEKADGFAGVFPEHKYEIVRRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGIVLGSYMALMTVLFFWAAKDTDFFSDKFGVRSLRNNPNEMMAALYLQVSIISQALIFVTRSRNWSFFERPGLLLLAAFFIAQLIATVIAVYAHWEFARIKGMGWGWAGVIWLYSLVTYLPLDLLKIAIRYILSGKAWDNLLENKTAFTTKKDYGREEREAQWAAAQRSLHGLQASTSNNNIFNETTSYRELSEIAEQAMRRAEVARLMEKNTLKGRVESVVKLKGLDLDTSKHHYTI* 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3301 950 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Tpr1g3301 950 Pfam E1-E2 ATPase 131 308 - -
Tpr1g3301 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 101 349 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 561 674 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 34 804 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 586 605 - -
Tpr1g3301 950 PRINTS P-type cation-transporting ATPase superfamily signature 609 621 - -
Tpr1g3301 950 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Tpr1g3301 950 SFLD p-type atpase 311 637 IPR044492 -
Tpr1g3301 950 PANTHER PLASMA MEMBRANE ATPASE 1 930 - -
Tpr1g3301 950 Gene3D - 326 623 IPR023214 -
Tpr1g3301 950 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 845 IPR023298 -
Tpr1g3301 950 PANTHER CALCIUM-TRANSPORTING ATPASE 1 930 - -
Tpr1g3301 950 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Tpr1g3301 950 Gene3D - 899 950 - -
Tpr1g3301 950 SFLD Haloacid Dehalogenase 311 637 - -
Tpr1g3301 950 Gene3D - 341 488 IPR023299 GO:0000166
Tpr1g3301 950 Gene3D - 132 216 - -
Tpr1g3301 950 Gene3D - 94 813 - -
Tpr1g3301 950 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 PRINTS H+-transporting ATPase (proton pump) signature 558 574 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 PRINTS H+-transporting ATPase (proton pump) signature 586 602 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 PRINTS H+-transporting ATPase (proton pump) signature 617 642 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 PRINTS H+-transporting ATPase (proton pump) signature 758 779 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr1g3301 950 SUPERFAMILY HAD-like 325 633 IPR036412 -
Tpr1g3301 950 Pfam haloacid dehalogenase-like hydrolase 325 600 - -
Tpr1g3301 950 CDD P-type_ATPase_H 34 839 IPR006534 GO:0008553|GO:0016021|GO:0120029
Tpr1g3301 950 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3301 Tpr-Chr1 37412056 37418786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3301 2 950 Primary Pumps ATPases AT2G07560 81.158 0.0 1586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3301 K01535 - gmx:100791692 1625.14