Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3292 ATGGCTGGTTCCAGTTCTTGTTCTGTTTCTGTTTCTGGTTCTGTTAGTTGTAAAAGTGATAGTGGAATTGAGAATTTGATTTGTGCTAGTAAATCATTGAAACTTAGTTTAGAGAAATCAAAGAGTGTTGGATTAGCATTAGAGAAAGCAGGGCCAAGGTTAGATGAGATTAGGGTAAGGTTACCTTGGCTTGAATCTGCGGTTAGGCCGATTAGAGCGGAGAAAGATGCTCTTGTGGCGGTTGGAGGTCATATTAATAGGGCTGTTGGTCCTGCGGCTGCTGTGTTGAAGGTTTTCGATGCGGTTCATGGGCTTGAGAAGTCTTTGTTGTCGGATCCACGGATTGATTTACCGGGTTATTTGTCGGTTTTGAAGCGTCTTGAGGAGGCGTTGAGGTTCTTGGGAGATAATTGTGGTTTGGCTATTCAGTGGTTGGATGATATAGTTGAGTATTTAGAAGACAATTCGGTTGCTGATCAGGTTTATCTTAAGAATTTGAAGAAGGAGTTGGAGAATCTTAAGGAATCGCAGAATGGTGATTTAGATGGTGGTTTGTTAGATGCTGCTTTAGATAAATTAGAGAATGAATTCAGGTTGCTTTTAACTGATAACAGTGTGCCACTTCCTATGTCGTCGGATTCTCTTGGTGATCAGCCTTGCATTGCGCCTTCGCCTTTGCCTGTTTCTGTTGTTCATAAATTGCAGGCTATTCTCGGCAGGTTGAGAGCTAATGATAGACTTGATAAATGTGTGTCGATTTATGTTGATGCTAGAAGTTCTAATGTGAGGGCAAGTTTGCAGGCGCTGAATTTGGATTACCTCGAGATCTCGGTGTCTGAGTTCAATGATGTGCAGAGTATAGAAGTGTATATAGCTCAGTGGGGAAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGTAATGATGTGTTTGAGAGGCTTGGACTCGATGTGTGGATGGGTTGCTTTTCAAAGATAGCTGCACAGGCTGGTATACTTGCGTTTCTTCAGTTTGGTAAGACTGTTACGGAGAGTAAGAAAGATCCCATTAAGCTTTTGAAGTTGTTGGATATTTTTGCGTCGTTGAACAAATTGAGACTGGATTTCAACCGTCTTTTCGGGGGTGATGCGTGCGTCGAAATTCAAAATTTGACTAGGGAACTTATTAAGAGTGTGATTGATGGTGCAGCGGAAATTTTCTGGGAACTTTTGGTTCAGGTAGAGTTACAGAGGCAGAACCCTCCTCCTCCAGATGGCAGTGTCCCGAGATTGGTGAGCTTTATCACTGATTACTGCAATAAACTCTTGGGGGACGACTATAAGCCTATACTGACTCAAGTCCTGATCATTCACCGAAGTTGGAAGCGTCAAAGTTTTCAAGAGAAGCTCCTTGTTAATGAGATTTTGAACATATTGAAAGCTGTTGAATTAAATTTGGAGACATGGATCAAGGCTTATGATGATCCTATGTTGTCAAGCTTTTTCGCCATGAACAATCACTGGCATCTGTTCAAGCATTTGAAAGGGACAAAGCTTGGAGATCTTTTAGGGGATTCGTTAAAGGAACATGAACAGTATAAGGACTATTACTCCACAACATTCTTGAGAGATAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGTTGATTCTTTTCTCTGGAGGGCGTGCAACTGCTCGTGATCTGGTCAAGAAAAGATTGAAAAAGTTCAACGAAGTTTTCGATGATATGTATTCAAAGCAGTCGGGTTGGATCATGGTCGAGCGAGATCTAAGAGAGAAGACATGTCAGCTTATAGTGCAGGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTACGGTCCCTTGGTCGAGCAAGATGCCAGCTCTAATAAATATGCAAAATACACAGTACAGAAGCTTGAAGAAATGCTTTTGTGTCTTTACCGGCCGAAGCCTGCAAGACACGGCAGCATGAAAAGTCCGCAGCTTAGTGGAAAGTACGGCAATGGAATACCCGATCTTCGTCGAACGGCTTCTGCAGTCGTGTAG 2058 0.4276 MAGSSSCSVSVSGSVSCKSDSGIENLICASKSLKLSLEKSKSVGLALEKAGPRLDEIRVRLPWLESAVRPIRAEKDALVAVGGHINRAVGPAAAVLKVFDAVHGLEKSLLSDPRIDLPGYLSVLKRLEEALRFLGDNCGLAIQWLDDIVEYLEDNSVADQVYLKNLKKELENLKESQNGDLDGGLLDAALDKLENEFRLLLTDNSVPLPMSSDSLGDQPCIAPSPLPVSVVHKLQAILGRLRANDRLDKCVSIYVDARSSNVRASLQALNLDYLEISVSEFNDVQSIEVYIAQWGKHLEFAVKHLFEAEYKLCNDVFERLGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGDACVEIQNLTRELIKSVIDGAAEIFWELLVQVELQRQNPPPPDGSVPRLVSFITDYCNKLLGDDYKPILTQVLIIHRSWKRQSFQEKLLVNEILNILKAVELNLETWIKAYDDPMLSSFFAMNNHWHLFKHLKGTKLGDLLGDSLKEHEQYKDYYSTTFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDDMYSKQSGWIMVERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDASSNKYAKYTVQKLEEMLLCLYRPKPARHGSMKSPQLSGKYGNGIPDLRRTASAVV* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3292 685 Pfam Exo70 exocyst complex subunit 293 647 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr1g3292 685 SUPERFAMILY Cullin repeat-like 95 651 IPR016159 -
Tpr1g3292 685 Gene3D Exocyst complex component Exo70 141 658 - -
Tpr1g3292 685 PANTHER EXOCYST COMPLEX PROTEIN EXO70 21 674 IPR004140 GO:0000145|GO:0006887
Tpr1g3292 685 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 21 674 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3292 Tpr-Chr1 37337128 37340186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3292 16 685 EXO70 exocyst subunit family AT4G31540 74.123 0.0 1032
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3292 K07195 - gmx:100796139 1140.95