Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3291 ATGGCTGTGGAACTCATGGGGTTCCCAAAACTAGATGAACAAAAAGCCATACAAGAGGCTGCATCAGAAGGTCTCAAAGGCATGGAACACTTGATCCTAACCCTTTCTAATCAACCAACTCAATTAAACACTCAACTAACGGATCACACCGTTTCTAAGTTCAAAAAACTCATTTCTTTACTTAACCGAACCGGTCATGCCCGGTTCAGACGCGCACCGGTTCAAACCTCTTCATCACCGGTTCAAATCTTTTCATCACCGGTTCAACTTCAACCAACACCGGTTCAACCCACACCTTCTTCTCTCCCACCGCCACAAGCAGTTTCTCATTCTCAGCCGAAACAGTTTCTTTCTCCGTCACCGGCACTATCTCCGACGCCGATTTCAACACGTCACGCGCCGGCGAGTTTTGTTCAACCGCAATCACTTTCGCATAGTCTAACGCTAGATTTCACGAAACCTAACGACGTCGTTTTGAGCTCAAATGCAAAAAATTCAAATTCTGTGGTTGAACTTGAATTCTCGAAGGATACAGCGACGTTTAGTGTTTCTTCAACTTCGTCGTTTATGTCATCTGCTATTACCGGTGACGGTAGCGTCAACGGTAAACAAGGATCGTCGATTTTTCTTACTCCGGCGGCAACACCAGCTATCTCCGGTGGAAAACCACCGCTCTTGTCTGGACCGTCTAAGAAACGGTGTCACGATCATGGTGAACATTCCGATGACGTTTCAGGATCAAATAAGTGTCACTGTGTTAAGAGAAGAAAAAATAGGGTGAAGAGAACCGTGAGAGTACCTGCAATAAGTTCAAAGACAGCCGATATACCGGCAGACGAGTACTCGTGGAGAAAATACGGTCAAAAACCAATCAAAGGATCACCATATCCACGCGGCTATTACAAGTGTAGCACAGTAAGAGGGTGCCCAGCAAGGAAACACGTGGAGCGTGCTCCAGATGATCCAACGATGCTGATTGTAACATATGAAGGGGAACACAGACACGCAATTCAAGCCGCGATGCAGGAGAATGCAGCCGGGATTGTGGGTTTGGTATTTGAGTCAACGTAA 1071 0.4641 MAVELMGFPKLDEQKAIQEAASEGLKGMEHLILTLSNQPTQLNTQLTDHTVSKFKKLISLLNRTGHARFRRAPVQTSSSPVQIFSSPVQLQPTPVQPTPSSLPPPQAVSHSQPKQFLSPSPALSPTPISTRHAPASFVQPQSLSHSLTLDFTKPNDVVLSSNAKNSNSVVELEFSKDTATFSVSSTSSFMSSAITGDGSVNGKQGSSIFLTPAATPAISGGKPPLLSGPSKKRCHDHGEHSDDVSGSNKCHCVKRRKNRVKRTVRVPAISSKTADIPADEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPTMLIVTYEGEHRHAIQAAMQENAAGIVGLVFEST* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3291 356 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 353 IPR044810 GO:0003700
Tpr1g3291 356 Pfam WRKY DNA -binding domain 279 335 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3291 356 SUPERFAMILY WRKY DNA-binding domain 273 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3291 356 SMART WRKY_cls 277 337 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3291 356 MobiDBLite consensus disorder prediction 92 106 - -
Tpr1g3291 356 ProSiteProfiles WRKY domain profile. 272 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr1g3291 356 MobiDBLite consensus disorder prediction 89 131 - -
Tpr1g3291 356 MobiDBLite consensus disorder prediction 229 249 - -
Tpr1g3291 356 Pfam Plant zinc cluster domain 231 275 IPR018872 -
Tpr1g3291 356 MobiDBLite consensus disorder prediction 107 131 - -
Tpr1g3291 356 MobiDBLite consensus disorder prediction 219 249 - -
Tpr1g3291 356 Gene3D WRKY domain 260 337 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr1g3291 356 PANTHER WRKY PROTEIN 12 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3291 Tpr-Chr1 37326397 37329164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3291 1 355 WRKY Transcription Factor Family AT2G24570 55.068 7.07e-111 324
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr1g3291 WRKY 8.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3291 - - cam:101509842 518.85