Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3279 | ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGACACAGATAAAGGGAGCCAAAATGCACTTAAATGGGCCATTGACCATCTCATCACAAAAGGTTCAACTATTGTTCTCATCCATGTCAAGGTTAAACCAACATCATCATCTAATTCAACCCCAAGGGCAGGGATTGTTGAGCAATGCACAATAGTGCCTAAAGATCCTGATGAATTCACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGAAAAGATATACACTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAACAAAAATGGTTTTCTCAAAAGATTCAAGGTGGTTGATATTCCAGGAACTGTATCAAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCACCTGCATTTTCACCTCTACAAACTCAACTTAGTAAATCTAGTAGTAGGTCAGATCGTTCAGAAACTCGTATGCCAATAGCAGCTAAAGTACCTGAGAGGAGATCATTTGAGGGACCACCGCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATACGGAGAACTTCCTATGCCAGATAGTGACATATCTTTTGTAAGCTCAGGAAGACCGAGTACAGATCGTTTATTCCCTTCAATATATAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGGAGGTCCATTGATATTGGCACTCCTGATTTCTCAACTTTCTCAAATGATAGTGATGGACTTTCGTCTTCTACATCAAATATGGATGATGTGGAGGCTGAAATGAGGAGACTAAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAGGCGAAATCAAAAGCAGCCATTGAGACTGCTGAAGCGCAAAAGAGGATTGCAGAACTTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTCTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATGCTTTGTCAAGCCAAGATGTGAGGTATAGAAGATATGCAATTGAAGAGATTGAAGCTGCAACGAATTTTTTCGCAGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCAGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCAAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATACGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTCTTTTGTAGAGGAAAAACTCCACCGCTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGGAACTACGTCGCAAAGATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCATCAGTAGCAGACACTGTGACGCAATATCGAATGACGTCTGCTGCCGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATATTCTTGCAAATTTTGACAGCACGACCGCCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAAGGGAACATTTGATGAGATGTTGGATCCAAGAATAACAGATTGGCCAGTTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTTCTGAGTTAAGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTTGCTGAAAGTAATGATAACCATTCTATGTTTAGTGGATTTACGAGTCCATCGACTCAGAGCCAAGTCTCTCTTCAGATGGATGGGTCAGGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA | 2343 | 0.4123 | MWLQKNQWDKKDGVNGIVAVAIDTDKGSQNALKWAIDHLITKGSTIVLIHVKVKPTSSSNSTPRAGIVEQCTIVPKDPDEFTKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKRFKVVDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSKSSSRSDRSETRMPIAAKVPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSIYNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIGTPDFSTFSNDSDGLSSSTSNMDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAELEAQKRISAEMKALREAEEKRKVVDALSSQDVRYRRYAIEEIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGKTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIEKGTFDEMLDPRITDWPVEEALGFAKMAIKCSELRRKDRPDLGKEVMPELNRLRELAESNDNHSMFSGFTSPSTQSQVSLQMDGSGSPLPYSGDSTRNTSSPL* | 781 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3279 | 780 | MobiDBLite | consensus disorder prediction | 174 | 192 | - | - | |
Tpr1g3279 | 780 | MobiDBLite | consensus disorder prediction | 173 | 250 | - | - | |
Tpr1g3279 | 780 | Coils | Coil | 323 | 350 | - | - | |
Tpr1g3279 | 780 | SMART | serkin_6 | 464 | 724 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3279 | 780 | Coils | Coil | 356 | 435 | - | - | |
Tpr1g3279 | 780 | PANTHER | U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE | 11 | 773 | - | - | |
Tpr1g3279 | 780 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 582 | 594 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g3279 | 780 | SUPERFAMILY | Protein kinase-like (PK-like) | 447 | 719 | IPR011009 | - | |
Tpr1g3279 | 780 | Gene3D | Transferase(Phosphotransferase) domain 1 | 537 | 748 | - | - | |
Tpr1g3279 | 780 | Pfam | Protein kinase domain | 467 | 697 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3279 | 780 | MobiDBLite | consensus disorder prediction | 738 | 780 | - | - | |
Tpr1g3279 | 780 | ProSiteProfiles | Protein kinase domain profile. | 464 | 743 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3279 | 780 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 18 | 140 | - | - | |
Tpr1g3279 | 780 | Gene3D | Phosphorylase Kinase; domain 1 | 441 | 536 | - | - | |
Tpr1g3279 | 780 | MobiDBLite | consensus disorder prediction | 193 | 218 | - | - | |
Tpr1g3279 | 780 | CDD | STK_N | 17 | 165 | - | - | |
Tpr1g3279 | 780 | Gene3D | HUPs | 17 | 162 | IPR014729 | - | |
Tpr1g3279 | 780 | CDD | STKc_IRAK | 470 | 730 | - | - | |
Tpr1g3279 | 780 | Pfam | Universal stress protein family | 18 | 139 | IPR006016 | - | |
Tpr1g3279 | 780 | PANTHER | OS02G0152300 PROTEIN | 11 | 773 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3279 | Tpr-Chr1 | 37223148 | 37228552 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3279 | 1 | 757 | Receptor kinase-like Gene Family | AT1G78940 | 56.298 | 0.0 | 797 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-IXb | Tpr1g3279 | Pkinase | 1.3e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3279 | - | - | gmx:100779981 | 1130.93 |