Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3279 ATGTGGTTGCAAAAGAATCAATGGGACAAGAAGGATGGGGTGAATGGAATAGTGGCAGTGGCAATAGACACAGATAAAGGGAGCCAAAATGCACTTAAATGGGCCATTGACCATCTCATCACAAAAGGTTCAACTATTGTTCTCATCCATGTCAAGGTTAAACCAACATCATCATCTAATTCAACCCCAAGGGCAGGGATTGTTGAGCAATGCACAATAGTGCCTAAAGATCCTGATGAATTCACCAAAGAAATTTTCCGTCCATATCGCGTCTTTTGTGCGCGAAAAGATATACACTGCAAGGACATTGTACTAGAACATGGAGATGTATCCAAAGCATTAATTGAATATACTTCTCAATCAGCAATTGAGCATTTGGTTATAGGCTCTTCCAACAAAAATGGTTTTCTCAAAAGATTCAAGGTGGTTGATATTCCAGGAACTGTATCAAAAGGGGCACCAGATTTTTGTACAGTATATATTGTTGGTAAAGGAAAAATTCAATCTATGAGATCTGCTTCTAGACCTGCACCTGCATTTTCACCTCTACAAACTCAACTTAGTAAATCTAGTAGTAGGTCAGATCGTTCAGAAACTCGTATGCCAATAGCAGCTAAAGTACCTGAGAGGAGATCATTTGAGGGACCACCGCGTAGATCCCAAGATGGAGCAGATTCATTCAGGTCACCGTTCACTCGGAGACGTCCAAATGACAAGTCATACGGAGAACTTCCTATGCCAGATAGTGACATATCTTTTGTAAGCTCAGGAAGACCGAGTACAGATCGTTTATTCCCTTCAATATATAACCACAACTACAATTCAGAGTCAAGTTTTTCCAATCCTAGGCTATCATATAGTTCTGATACTGATGGAAACTATAGCTTTGAATCAATAAATTATGGAAGGAGGTCCATTGATATTGGCACTCCTGATTTCTCAACTTTCTCAAATGATAGTGATGGACTTTCGTCTTCTACATCAAATATGGATGATGTGGAGGCTGAAATGAGGAGACTAAAATTGGAGTTAAAGCAAACAATGGAAATGTATAGCACAGCTTGTAAAGAAGCACTCACAGCACAGCAGAAGGCTGTAGAACTCCAAAGATGGAAATTAGAGGAAGAAAGGAGATTGGAAGAGGCAAGAATGGCTGAAGAAAATGCATTGGCTGTTGCAGAAAAGGAAAAGGCGAAATCAAAAGCAGCCATTGAGACTGCTGAAGCGCAAAAGAGGATTGCAGAACTTGAAGCACAAAAGAGAATTAGTGCAGAAATGAAAGCTCTAAGAGAAGCAGAAGAGAAAAGAAAAGTAGTTGATGCTTTGTCAAGCCAAGATGTGAGGTATAGAAGATATGCAATTGAAGAGATTGAAGCTGCAACGAATTTTTTCGCAGACTCTCTTAAGATTGGAGAAGGTGGTTATGGTCCAGTTTATAAATGTCTTCTAGACCATACACCTGTCGCAGTTAAAGTTCTTCGTCCTGATGCACAACAAGGAAGGTCGCAATTTCAACGAGAGGTTGAGGTATTGAGTTGCATAAGGCATCCAAACATGGTTCTTCTCCTAGGAGCCTGTCCGGAATACGGCTGCCTAGTTTACGAGCACATGGCGAATGGAAGTTTGGACGATTGTCTCTTTTGTAGAGGAAAAACTCCACCGCTACCTTGGCAGCTAAGGTTCAAAATTGCAGCTGAAATTGGAACAGGCTTACTCTTCCTCCACCAAACAAAACCTGAGCCACTAGTACATAGAGACCTTAAACCGGCAAACATCTTGCTCGACCGGAACTACGTCGCAAAGATAAGTGATGTTGGTTTGGCAAGACTAGTACCTCCATCAGTAGCAGACACTGTGACGCAATATCGAATGACGTCTGCTGCCGGAACATTCTGTTACATAGATCCTGAGTACCAACAGACAGGAATGTTGGGAGTGAAATCTGATATATACTCACTTGGGATAATATTCTTGCAAATTTTGACAGCACGACCGCCGATGGGATTGACACATCATGTTGGTAGAGCAATTGAGAAGGGAACATTTGATGAGATGTTGGATCCAAGAATAACAGATTGGCCAGTTGAAGAGGCTCTTGGATTTGCTAAGATGGCTATAAAATGTTCTGAGTTAAGGAGGAAAGATAGACCTGATCTTGGTAAAGAGGTTATGCCTGAACTTAATAGGTTAAGAGAACTTGCTGAAAGTAATGATAACCATTCTATGTTTAGTGGATTTACGAGTCCATCGACTCAGAGCCAAGTCTCTCTTCAGATGGATGGGTCAGGTTCTCCACTTCCTTATTCTGGGGATAGCACAAGAAATACATCAAGCCCTCTTTGA 2343 0.4123 MWLQKNQWDKKDGVNGIVAVAIDTDKGSQNALKWAIDHLITKGSTIVLIHVKVKPTSSSNSTPRAGIVEQCTIVPKDPDEFTKEIFRPYRVFCARKDIHCKDIVLEHGDVSKALIEYTSQSAIEHLVIGSSNKNGFLKRFKVVDIPGTVSKGAPDFCTVYIVGKGKIQSMRSASRPAPAFSPLQTQLSKSSSRSDRSETRMPIAAKVPERRSFEGPPRRSQDGADSFRSPFTRRRPNDKSYGELPMPDSDISFVSSGRPSTDRLFPSIYNHNYNSESSFSNPRLSYSSDTDGNYSFESINYGRRSIDIGTPDFSTFSNDSDGLSSSTSNMDDVEAEMRRLKLELKQTMEMYSTACKEALTAQQKAVELQRWKLEEERRLEEARMAEENALAVAEKEKAKSKAAIETAEAQKRIAELEAQKRISAEMKALREAEEKRKVVDALSSQDVRYRRYAIEEIEAATNFFADSLKIGEGGYGPVYKCLLDHTPVAVKVLRPDAQQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYEHMANGSLDDCLFCRGKTPPLPWQLRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVAKISDVGLARLVPPSVADTVTQYRMTSAAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMGLTHHVGRAIEKGTFDEMLDPRITDWPVEEALGFAKMAIKCSELRRKDRPDLGKEVMPELNRLRELAESNDNHSMFSGFTSPSTQSQVSLQMDGSGSPLPYSGDSTRNTSSPL* 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3279 780 MobiDBLite consensus disorder prediction 174 192 - -
Tpr1g3279 780 MobiDBLite consensus disorder prediction 173 250 - -
Tpr1g3279 780 Coils Coil 323 350 - -
Tpr1g3279 780 SMART serkin_6 464 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3279 780 Coils Coil 356 435 - -
Tpr1g3279 780 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 11 773 - -
Tpr1g3279 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 582 594 IPR008271 GO:0004672|GO:0006468
Tpr1g3279 780 SUPERFAMILY Protein kinase-like (PK-like) 447 719 IPR011009 -
Tpr1g3279 780 Gene3D Transferase(Phosphotransferase) domain 1 537 748 - -
Tpr1g3279 780 Pfam Protein kinase domain 467 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3279 780 MobiDBLite consensus disorder prediction 738 780 - -
Tpr1g3279 780 ProSiteProfiles Protein kinase domain profile. 464 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3279 780 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 140 - -
Tpr1g3279 780 Gene3D Phosphorylase Kinase; domain 1 441 536 - -
Tpr1g3279 780 MobiDBLite consensus disorder prediction 193 218 - -
Tpr1g3279 780 CDD STK_N 17 165 - -
Tpr1g3279 780 Gene3D HUPs 17 162 IPR014729 -
Tpr1g3279 780 CDD STKc_IRAK 470 730 - -
Tpr1g3279 780 Pfam Universal stress protein family 18 139 IPR006016 -
Tpr1g3279 780 PANTHER OS02G0152300 PROTEIN 11 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3279 Tpr-Chr1 37223148 37228552 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3279 1 757 Receptor kinase-like Gene Family AT1G78940 56.298 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Tpr1g3279 Pkinase 1.3e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3279 - - gmx:100779981 1130.93