Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3268 ATGGAATCAAAGTGGAGCAACATTCTAACGCCGTCGTCAATTTTCACCAGCTTCGAAGATCTCAAATGGATCACAACAGAGTTCGATCATGAACTTTTCACCAAGCGAGTCCAAACACCAAACGAATCGGCCAACGACAACGACGTCAAACCGTGTAGAGTGGATCCGTTCATCGGCGTCGGTGATGTTTGCTCCGGTAACATCGCCGGTGCCGCCGATTTTCGAAATCTGGATGCAGTGACTTCATTTTCAACATGTGGTGAACCAACAAATAATACTCTTGTATGCTCCAAAAACCTCACTCCCAAGCATTCCACCATCACTGCAACTATTGAATCTCAGTCATCCATTTCTGCTACCGTTACCAGCCCAGTGTCAGCTAATAAACCAAGCAGTAGAGAAAATCAAGCCAAAGGAGTGACTACTACAAGTGGTTCATCACGTGATCCATCTGATGAAGATGATGAAGCAGGTCCTTGTGAACAAAGTACAAACCCTATAGATATGAAGCGCCTTAGAAGGAAGGTTTCTAATCGCGAGTCTGCCAGAAGGTCCAGAAGAAGAAAACAAGCACATTTGGCAGATCTCGAGGTTCAGGTTGAACAGTTGAGACTTGAAAATGCAAGCCTATTTAAGCAGCTTACAGATGCCAGCCAACAATTTCGTGATGCTAACACTAATAACAGAGTGCTAAAATCAGATGTTGAAGCTTTGAGAGCTAAGGTGAAGTTAGCAGAGGATATGGTCACTAGGGGCACTTTACCCACTTTTAACAACCATCTTCTCCAAAATCAGAACCAATTGAACACCACCCTACCACAACTCAACGCTAGTAATCTCCGCTGCATGACTCACGTTTCGCCTACCATCACCGTCCATGGAAACGAAGCTTCATATGGTGTTAGTGGACAGAATTCAGCAATTGGACTTGGTGACTTTGATATATCTTGCAGTGATTTCAACAATGGAGTCAATAGTGATGCTGTGAGCTCTTTGACTAGTATATGGCCATAA 1014 0.4398 MESKWSNILTPSSIFTSFEDLKWITTEFDHELFTKRVQTPNESANDNDVKPCRVDPFIGVGDVCSGNIAGAADFRNLDAVTSFSTCGEPTNNTLVCSKNLTPKHSTITATIESQSSISATVTSPVSANKPSSRENQAKGVTTTSGSSRDPSDEDDEAGPCEQSTNPIDMKRLRRKVSNRESARRSRRRKQAHLADLEVQVEQLRLENASLFKQLTDASQQFRDANTNNRVLKSDVEALRAKVKLAEDMVTRGTLPTFNNHLLQNQNQLNTTLPQLNASNLRCMTHVSPTITVHGNEASYGVSGQNSAIGLGDFDISCSDFNNGVNSDAVSSLTSIWP* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3268 337 Pfam bZIP transcription factor 169 220 IPR004827 GO:0003700|GO:0006355
Tpr1g3268 337 Coils Coil 179 248 - -
Tpr1g3268 337 MobiDBLite consensus disorder prediction 114 147 - -
Tpr1g3268 337 PANTHER BASIC LEUCINE ZIPPER 9 21 337 - -
Tpr1g3268 337 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 173 188 IPR004827 GO:0003700|GO:0006355
Tpr1g3268 337 CDD bZIP_plant_GBF1 171 222 IPR045314 GO:0003700|GO:0006355
Tpr1g3268 337 PANTHER BASIC LEUCINE ZIPPER 63 21 337 - -
Tpr1g3268 337 SMART brlzneu 166 230 IPR004827 GO:0003700|GO:0006355
Tpr1g3268 337 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 231 IPR004827 GO:0003700|GO:0006355
Tpr1g3268 337 Gene3D - 169 226 - -
Tpr1g3268 337 MobiDBLite consensus disorder prediction 114 191 - -
Tpr1g3268 337 SUPERFAMILY Leucine zipper domain 170 220 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3268 Tpr-Chr1 37103918 37110613 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3268 112 337 bZIP Transcription Factor Family AT5G24800 50.000 1.51e-59 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr1g3268 bZIP_1 9.7e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3268 K25784 - gmx:100776831 363.614