Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3231 ATGGATGAAACTGGTGTTGAAGATGAGTTTAAGAGGTGTATTAGAAAAGGGTCTAATGGATGGAGGTGTAAAGAGAAAGCTTTACCTGAAAAAAACCAATGTGAGAAGCACCATTTGTATAGTATTGAGAGAAGCAAAACGATGAAGGAAAGTAGTTCTGGTGAAAAGAAAGGTACAAAAAGAAAAGGTGAAGAGAGTTTACAAAATGGGGCTGGTGTTGATGATGGTGGTAATGGGTTGTTTGGTGGTGGTGGTGGTGGTGATGGTGGTTTTGGAGAGATTTTTGGTGGAGGTGATGAAGTGAATGGTAGTGTTGGTTGTGAAAGTTTTAATCTTTGGCAACAAGATGGTCAACAAGTTGGGGTTTTTGAACAAGGGAGTGGAAAATTAGGTCAATTTCTTGGTGATGGAGTTGAGTTTATAGGTGGGTTTGTTGAGGATGGGAATAGGGTTAATGGTGGTTTAGGTCAGCCATGGAGTGGTGTTGGTGTATTTGGAAATGCTGGTGGTGTTTCTGGTGTTGGTAAAGATGATCATGGAAATGGGGTTGATGGTGTTTGTGGAAATGATTCACTTGGTTTTCATTCTGAAAGAGTTGGAGGGTTGGTTAGTGGTGAAACTGGTCTTGGGGATTTATATGATCGTAGTTTTCAAGCTTTTGTTAGTCAAGGTAGGGTTTGTGATGAAGATGTGAATTTAGTTGTTGATGGAACTGGTTTTCAAGGGTTGGGTGGTGAAAGTGCTAATGATTTTAGAGGTGAGGTTGGTGGGGGTGTTGGAAATGTAGTTCAGTGTGGCGGTAAATGTGAAGGCGAAAAAAATGTTGGTAGTATATTAGAGGGGACCGAGTCAAGTAACAAGATGGGAGCTATTGGCGTGGAAGAGAGAACGGAGGAGTTATTAAGTGGTGGAGTTTCTATCAATGAAGAGGCAAAAGGTGAAGTTTTGAAAAGGGATAACTTAGCCTTGGATGGAGAAACTGTTTGTGGAAGTGGTAATGCCGGAACGATTGGGACGAGCGCTGTTGAAGCTTTAGAGAATGAAGAATTGGTGTTTTGTGGTAAGGCTGATCAGGAAGGTGTGGCTGTGGATGAGATTGCAAGGACAAAGAAGTGTGGTCAATGGGAAGATTGGAAGCGTGGAAGGGAGGTTATTTTGGCGGTTGGTTATGAAGTTGCTGGGGTTGGTGACATTAACGAACCAAGAAAGCGTCGTAGAAGATCAAAGGATTCGGTAAACAAAGAGAAGAATGTCGTGGAGGTTAGTAGTGAAACTGCTGCTGAGATAGCTAGGCCAAAGAAGCGTGGTCGGCCAAAAAATCGGAAACGTAAGGAGATTGTCATGGACGTTAGTAACGAGGATGTCGGTGATGGTGAGATTGCGAGACCGAAGAAGCGCGGTCGACCAAAGGGTTATAACTGTCGAAAGAAGATTGTCATTGAGGTTAGTAATAAAGTTATTGTTAAAGGTGAGATTGCAGTAGCTATGAAGCCTTGTCGATCAAAGAATGTGATAAACGAAGGAGCAGATGAGATTGCAACAAAAGGTTTAGAAACCAAAATGATGAGCGTTCCATGTCAAAAAGGTGCAGACGAGGTTGCAAGCCTAACTAATAAACTTGGTCCTGCATTGCGTACAAGGAATAAATTGAGAAGCATTGGATTTGAGGGTCATGAGCATCCAGGAAGGTCTAGTGATGTTTGTCTTGAAGATGATGATGGAACCACAAATGTTTTGCCAAGTGGTTTAGAGATTACTAAATTGGCTCCTTTATGTGATGAGCAGGAAGAAGGGATTCCTTCTGAAGCCACCAAACATATTGAAAACATAATTGCACAGCCAATTGTTAAGCGTGGTCGACCGAAGGGATCAGCGAACAAGGAGAAAAAACTAGAAGACCAGGAATTGTCTGTCCAAACCCTTGGTCAAGATGAGGTTCAAAATATTAAACCAAAGATGGGTCGACCAAAGGGGTCTAAAAATAGGAAGAAAAATATTGCTGGCGAAGCTCAAAACGAGTTACATAAGAAGAAAGGGCGTGGTAGGCCAAAGGGTTCTGGAAATAAGCAAAAGGAGATTGTTGTTCGATTGGAATCGAAGATTGAAAGGCGTGGTAGGCCAAAGGGTTCAGGCAAAAAGCAAAAGCGGGCTGCGTCTCGATTTGCTTCACAGATTGAAAGTCAGAAGAGTACTCGTGTTTATGGTCTTTTGAGTACGATGATGCCACAGAAGCATATGAATGAGGAGTCCATTTCACCGCCGGATGGTCAAGTAAATAAGGAAGAAAAGTCAGATTTTGTCTCAGAGTGTTCAAAGTATCCCGGAATTGAAAAGAGGACAAAAGGATTGATGAGTGAATCCAGCAATGTCCATAAGAGGTGCAGTGAAAGACTAAGAACATTGCCAACTGACCACAAGAATTATCAAGAAGTTGAAGTGGAAGAAGATTTTTCTGAAATGGAGGTGGAAGAAACTATAAACCATGATGAATTGGAATCTTCAGATTTGATGGGTGACTCAGAGATAAAAAAGGAGCGTAGAAATTCAAGGTGCCATCAGTGCTGGAAGAAAAGTAGGACTGGTCTCGTCGTTTGTACCAAGTGCAAAAGAAAGAAATATTGTTATGGGTGCATAGCAAAATGGTACCAAGATAAGACTAGAGAGGAGATAGAGACCGCGTGTCCCTTTTGTCTTGAATATTGCAATTGCCGACTGTGCTTAAAGAAAACTATATCCACAATGGATGAAAATGGTGAAGCAGATAGAGATGCTAAATTACAAAAATTGCTTTTCTTGCTTAAAAATATTTTGCCCTTACTCCAATATATCCAACGGGAGCAGAAATCAGAATTGGAAGTAGAAGCAAGCATACACGGTTCCTTGATGGTGGAAGAGGAGGATATTCTGCAGGCAACAGTTGATGATGATGATCGAGTTTATTGTGACAACTGCAATACATCCATTGTCAATTTCCACAGAAGTTGTACCAATCCTTATTGTCGGTACGATCTGTGTCTCACTTGTTGCACGGAACTGAGAAATGGAGTTCATTGCGAAGATATTCCTGCTAGTGGTAATGAGGAAATGGTTGATACACCACCTGAAACTATTGCTTGGAGAGCAGAGACAAATGGTAGCATTCCTTGCCCTCCAAAAGCTAGGGGAGGTTGTGGTACCGGTATTCTTTCGCTGAGGCGCCTATTCAAAGATAATTGGATTGACAAACTGACTAGAGGCGCAGAGGAACTTACAATCAAATATAACCCACCCATTGTTGATCTTTCTCTAGGATGTTCAGAATGCCATATTTTTGAGGAAGATGCAGCACATGATTCTGCAAGGAAGGCAGCTTCCAGAGAAACCGGTCATGACAACTTTTTGTACTGTCCAGATGCCGTTGAAATTGGAGACGCAGAATTTGAGCATTTCCAAAGACACTGGATGAGAGGCGAACCTGTTATTGTAAGGAATGCTTATAAAAAGGCTACTGGCCTTAGCTGGGACCCAATGGTGATGTGGAGAGCTTTTAGGGGGGCAAAGAAAATATTAAAAGAGGAGGCAGTTACTTTTAAAGCCATCGACTGCTTGGATTGGTGCGAGGTACAAGTTAACGCCTTTCAGTTCTTCAAAGGCTACTTGACAGGGCGTAGCTACACCGATGGATGGCCGGAGATGCTGAAGCTAAAGGATTGGCCACCATCAAATTTTTTTGAAGAGTGTTTGCCAAGGCATGGTGCTGAGTTTACAGCGATGCTTCCTTTTAGTGATTATACACATCCCAAATCCGGTGTTTTAAACCTTGCCACAAAGCTCCCTGCCCTTTTGAAGCCAGATTTGGGTCCTAAAACATACATTGCTTATGGAGCTTTAGAAGAGTTGAGTAGAGGTGATTCTGTGACAAAACTACATTGTGACATTTCAGATGCAGTCAATATTCTGACACACACAGCTGATGTAAATGTACCAACATGGCAATCCAGAATCATAAAAAAGTTAAAGAAGAAGTATGAAGCTGAAGATATGCGCGAGCTCTATGGTCAAGACATTAAGGCAGCTGGTTCACGTGGACGAAAACGCAAAAATTGTCGCGTAGATAATGCCGTGGATCCTAAAATCCCTGAAAAAGAAGACATTAGGGGTAGAGACTCAACCTTACTTGGAAGTCATGGAAAAGAAGAGAAACTTGATGCAGAAGCTTGTGTTCAAGAATTCTCTGAACCCAACAAAAATAAATTAGATTTAAATGTGAGTGAACAGGAAATCATTGATTCACCAAGGTTTCAGCAATTTGATCTCAATAGTCACGATTCCAGTTTCCTGGTTCCTGGAAATGATTGTGATAATGTGGAACAACGGTGTTCACCACCAGGTGATGGATCTTGTAAAGGAATTTCATCAGGTATTGATAATCAACCTTGTTGTGAAACTGTCAATGGATTAGATTCTTCAGATGAGTCCAGTTCGGATATTGAGACTGACAAAATAGAGTCAGTTGAAAATGACATATCGGGTAATGATGTTCATTTGGAGACTCAATATGGGAGTGCATTGTGGGACATATTCCGTAGGCAGGACGTACCAAAACTAACGGAGTACCTAAATAAACACTTTAGAGAGTTTCGCCACGTAACTAGTCTTCCAGTGAGTTATGTGATTCATCCTATTCATGACCAGCACCTTTATTTAAATGAGAAGCACAAAAAGCAACTCAAGCTAGAATATGGTGTTGAACCGTGGACGTTTGAGCAATATCTTGGAGAAGCTGTTTTCATACCTGCAGGATGTCCACATCAAGTGAGAAATAGAAAGTCTTGCATAAAAGTGGCTATGGACTTCGTTTCACCTGAGAATGTTCAGGAATGTGTTCGATTGACAGAGGAATTTCGCTTACTTCCAAAAACCCACAAATCTAAGGAAGATAAATTAGAGATAAAGAAGATGGCACTCTATGCTGCTGATGTTGCTATTGCTGAAGCCACTGAACTCCTGGGAGCTAAATGA 5001 0.4155 MDETGVEDEFKRCIRKGSNGWRCKEKALPEKNQCEKHHLYSIERSKTMKESSSGEKKGTKRKGEESLQNGAGVDDGGNGLFGGGGGGDGGFGEIFGGGDEVNGSVGCESFNLWQQDGQQVGVFEQGSGKLGQFLGDGVEFIGGFVEDGNRVNGGLGQPWSGVGVFGNAGGVSGVGKDDHGNGVDGVCGNDSLGFHSERVGGLVSGETGLGDLYDRSFQAFVSQGRVCDEDVNLVVDGTGFQGLGGESANDFRGEVGGGVGNVVQCGGKCEGEKNVGSILEGTESSNKMGAIGVEERTEELLSGGVSINEEAKGEVLKRDNLALDGETVCGSGNAGTIGTSAVEALENEELVFCGKADQEGVAVDEIARTKKCGQWEDWKRGREVILAVGYEVAGVGDINEPRKRRRRSKDSVNKEKNVVEVSSETAAEIARPKKRGRPKNRKRKEIVMDVSNEDVGDGEIARPKKRGRPKGYNCRKKIVIEVSNKVIVKGEIAVAMKPCRSKNVINEGADEIATKGLETKMMSVPCQKGADEVASLTNKLGPALRTRNKLRSIGFEGHEHPGRSSDVCLEDDDGTTNVLPSGLEITKLAPLCDEQEEGIPSEATKHIENIIAQPIVKRGRPKGSANKEKKLEDQELSVQTLGQDEVQNIKPKMGRPKGSKNRKKNIAGEAQNELHKKKGRGRPKGSGNKQKEIVVRLESKIERRGRPKGSGKKQKRAASRFASQIESQKSTRVYGLLSTMMPQKHMNEESISPPDGQVNKEEKSDFVSECSKYPGIEKRTKGLMSESSNVHKRCSERLRTLPTDHKNYQEVEVEEDFSEMEVEETINHDELESSDLMGDSEIKKERRNSRCHQCWKKSRTGLVVCTKCKRKKYCYGCIAKWYQDKTREEIETACPFCLEYCNCRLCLKKTISTMDENGEADRDAKLQKLLFLLKNILPLLQYIQREQKSELEVEASIHGSLMVEEEDILQATVDDDDRVYCDNCNTSIVNFHRSCTNPYCRYDLCLTCCTELRNGVHCEDIPASGNEEMVDTPPETIAWRAETNGSIPCPPKARGGCGTGILSLRRLFKDNWIDKLTRGAEELTIKYNPPIVDLSLGCSECHIFEEDAAHDSARKAASRETGHDNFLYCPDAVEIGDAEFEHFQRHWMRGEPVIVRNAYKKATGLSWDPMVMWRAFRGAKKILKEEAVTFKAIDCLDWCEVQVNAFQFFKGYLTGRSYTDGWPEMLKLKDWPPSNFFEECLPRHGAEFTAMLPFSDYTHPKSGVLNLATKLPALLKPDLGPKTYIAYGALEELSRGDSVTKLHCDISDAVNILTHTADVNVPTWQSRIIKKLKKKYEAEDMRELYGQDIKAAGSRGRKRKNCRVDNAVDPKIPEKEDIRGRDSTLLGSHGKEEKLDAEACVQEFSEPNKNKLDLNVSEQEIIDSPRFQQFDLNSHDSSFLVPGNDCDNVEQRCSPPGDGSCKGISSGIDNQPCCETVNGLDSSDESSSDIETDKIESVENDISGNDVHLETQYGSALWDIFRRQDVPKLTEYLNKHFREFRHVTSLPVSYVIHPIHDQHLYLNEKHKKQLKLEYGVEPWTFEQYLGEAVFIPAGCPHQVRNRKSCIKVAMDFVSPENVQECVRLTEEFRLLPKTHKSKEDKLEIKKMALYAADVAIAEATELLGAK* 1667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3231 1666 Pfam JmjC domain, hydroxylase 1503 1612 IPR003347 -
Tpr1g3231 1666 ProSiteProfiles WRC domain profile. 7 51 IPR014977 -
Tpr1g3231 1666 ProSiteProfiles JmjC domain profile. 1260 1629 IPR003347 -
Tpr1g3231 1666 SMART cupin_9 1241 1629 IPR003347 -
Tpr1g3231 1666 SUPERFAMILY Clavaminate synthase-like 1140 1657 - -
Tpr1g3231 1666 SMART AT_hook_2 617 627 IPR017956 GO:0003677
Tpr1g3231 1666 SMART AT_hook_2 432 444 IPR017956 GO:0003677
Tpr1g3231 1666 SMART AT_hook_2 463 475 IPR017956 GO:0003677
Tpr1g3231 1666 SMART AT_hook_2 677 689 IPR017956 GO:0003677
Tpr1g3231 1666 SMART AT_hook_2 701 713 IPR017956 GO:0003677
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 39 77 - -
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 621 635 - -
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 662 676 - -
Tpr1g3231 1666 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 348 1027 IPR045109 GO:0032454|GO:0033169
Tpr1g3231 1666 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 1030 1663 IPR045109 GO:0032454|GO:0033169
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 39 68 - -
Tpr1g3231 1666 ProSiteProfiles Zinc finger RING-type profile. 851 897 IPR001841 -
Tpr1g3231 1666 Pfam Zinc-finger domain of monoamine-oxidase A repressor R1 847 910 IPR018866 -
Tpr1g3231 1666 Gene3D Cupin 1473 1638 - -
Tpr1g3231 1666 Gene3D Cupin 1129 1370 - -
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 614 726 - -
Tpr1g3231 1666 MobiDBLite consensus disorder prediction 685 705 - -
Tpr1g3231 1666 PANTHER ENBP1 PROTEIN 348 1027 - -
Tpr1g3231 1666 PANTHER ENBP1 PROTEIN 1030 1663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3231 Tpr-Chr1 36746405 36756339 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Tpr1g3231 JmjC 5.9e-18 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3231 K15601 - lang:109335468 1168.68