Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3194 ATGCCTCCTCAACTCCGAACTAGAACACCAAGAATCAACCCGAACCAGAACCCAAATCAAAACCCGATCACAAAACCCGCTCCAAGAGGTAGAAGAGGTAGACCTGCAAAAAACCGTAACGCGATCGCTGAAAACGAACAACCTCACGCGCCTCTTGTTAGGGTTTCAACAGATAATAATAATAATAATATAATTATTAAGCAAGATATTATGGATGATGACTGTAATAGCGGTGCTAGGACTCCTGATGATAAAGCTCCGGTGGCTGATGATGAAGGAACTACACCTCCTATTCCTGAAAAAGTTCAAGTAGGTGGTTCACCGTTGTATAGAGTAGATAGAAAGCTTGGGAAAGGAGGATTTGGTCAGGTTTATGTTGGTCGCCGTGTCGGTGCCGGAGCAGGAGCTCATGAGGTGGCTTTGAAGTTTGAGCATAAAAGTAGTAAGGGATGTAATTATGGACCTCCTTACGAGTGGCAGGTTTACAATGTATTAGGTGGTAGTCATGGTGTTCCACGAGTTCATTACAAGGGAAAGCAAGGTGATTTCTATGTTATGGTCATGGATATTCTTGGCCCTAGTTTATGGGATGTTTGGAATAACAAGACACACACGATGTCTGCTGAAATGGTGGCATGTATAGCAATTGAGGCTGTCTCCATATTAGAGAAGATGCATTCTAGAGGATACGTGCATGGTGATGTAAAACCTGAGAACTTTTTGCTTGGCCCTCCGGGAACTCATGAAGAGAAAAAGCTTTTTTTGGTTGATCTTGGATTAGCAACCCGTTGGCGTGATAATTCGACTGGTCTTCATGTTGACTATGATCAACGTCCAGATGTATTTAGGGGAACAGTTCGTTATGCCAGTGTCCACGCTCATCTTGGTAGGACAGGTAGCAGAAGAGACGATTTGGAATCTCTTGCATACACGCTAATCTTCCTTCTTCGTGGACGGCTACCTTGGCAAGGATACCAGGGAGAAAATAAAGGATTTCTTGTCTGCAAGAAGAAGATGTCCACCTCACCAGAAAATATGTGTATTCTTTGTCCCGCACCTTTTCGGCAGTTTATTGAGTACGTTGTGAATTTGAAGTTTGACGAAGAACCAAATTATGCAAAATATATATCACTTTTCGATGGAATTGTTGGTCCAAATCCAGACATTAGACCCATAAATACTGATGGTGCACAGAAGCTTATATATCAGGTTGGACATAAGAGAGGACGATTGACCATGGAAGAAGATGATGATGAGCAACCAAAGAAGAAAGTCAGAATGGGAATGCCAGCAACACAATGGATTAGTGTGTACAATGCACGCCGACCTATGAAGCAAAGGTACCATTACAATGTTACTGATATACGGTTGTCCCAACACATTGAGAAGGGATACGAAGATGGGTTATTTATCAGCAGCGTAGCTTGTTGTTCTAACCTTTGGGCACTGATTATGGATGCCGGCACTGGTTTCACCGCACAAGTTTATGAACTCTCACCCCACTTCCTTCACAAGGAATGGATTATGGAACAATGGGAAAAAAATTATTACATTAGTGCCATAGCTGGAGCTAATAATGGGAGCTCTTTGGTTGTAATGTCGAAAGGGACTCAATATTTGCAGCAATCCTATAAGGTCAGTGAATCATTTCCATTCAAGTGGATTAATAAAAAATGGAAAGAAGGATTTTTTGTCACTGCTATGGCCACTTCTGGAAGTAGATGGGCAATTGTCATGTCCCGTGGTGCTGGATTTTCAGATCAGGTTGTGGAGCTAGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGACAGTGGTTTCCGCATCACATCAACTGCTGCTACATATGACCAGGCTGCTCTTGTTCTTAGTATTCCAAGAAAGAAACCAACTGATGAAACTCAAGAAACACTCCGCACATCTGACTTTCCTAGTACTCATGTCAAGGAAAAATGGTCAAAGAACCTCTATATTGCATCTATTTGTTATGGAAGAACAGTTTCATGA 2013 0.4218 MPPQLRTRTPRINPNQNPNQNPITKPAPRGRRGRPAKNRNAIAENEQPHAPLVRVSTDNNNNNIIIKQDIMDDDCNSGARTPDDKAPVADDEGTTPPIPEKVQVGGSPLYRVDRKLGKGGFGQVYVGRRVGAGAGAHEVALKFEHKSSKGCNYGPPYEWQVYNVLGGSHGVPRVHYKGKQGDFYVMVMDILGPSLWDVWNNKTHTMSAEMVACIAIEAVSILEKMHSRGYVHGDVKPENFLLGPPGTHEEKKLFLVDLGLATRWRDNSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMSTSPENMCILCPAPFRQFIEYVVNLKFDEEPNYAKYISLFDGIVGPNPDIRPINTDGAQKLIYQVGHKRGRLTMEEDDDEQPKKKVRMGMPATQWISVYNARRPMKQRYHYNVTDIRLSQHIEKGYEDGLFISSVACCSNLWALIMDAGTGFTAQVYELSPHFLHKEWIMEQWEKNYYISAIAGANNGSSLVVMSKGTQYLQQSYKVSESFPFKWINKKWKEGFFVTAMATSGSRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWDSGFRITSTAATYDQAALVLSIPRKKPTDETQETLRTSDFPSTHVKEKWSKNLYIASICYGRTVS* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3194 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 230 242 IPR008271 GO:0004672|GO:0006468
Tpr1g3194 670 MobiDBLite consensus disorder prediction 1 35 - -
Tpr1g3194 670 MobiDBLite consensus disorder prediction 8 24 - -
Tpr1g3194 670 ProSiteProfiles Protein kinase domain profile. 110 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3194 670 SUPERFAMILY Protein kinase-like (PK-like) 110 385 IPR011009 -
Tpr1g3194 670 CDD STKc_CK1 110 379 - -
Tpr1g3194 670 PANTHER CASEIN KINASE-RELATED 70 644 - -
Tpr1g3194 670 MobiDBLite consensus disorder prediction 73 90 - -
Tpr1g3194 670 MobiDBLite consensus disorder prediction 73 95 - -
Tpr1g3194 670 Gene3D Transferase(Phosphotransferase) domain 1 91 427 - -
Tpr1g3194 670 PANTHER - 70 644 - -
Tpr1g3194 670 SMART serkin_6 110 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3194 670 ProSitePatterns Protein kinases ATP-binding region signature. 116 142 IPR017441 GO:0005524
Tpr1g3194 670 Pfam Protein kinase domain 110 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3194 Tpr-Chr1 36396927 36401980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3194 109 265 EF-hand Containing Proteins AT2G17290 30.675 2.17e-08 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tpr1g3194 Pkinase 3.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3194 - - rcu:8275677 1112.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3194 1 36396927 36401980 Tpr1g3194 1 36396927 36401980 ECH
Tpr7g0775 7 6867126 6871714 Tpr1g3194 1 36396927 36401980 ECH