Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3165 ATGATTCACTTGAACATGTCACTAACAAGATTACCACTTCTACTTCTACTGCTAATGAACCTTGTAAATGGTCAGAACAATTATAACTCGTCCGATGAATGCCCCTTTCGTCTATCTTGTTCGCGTAACAAGAATCAAACTATTGAGTTTCCAGCAATTCCAGTTCCAGTAAAACTCGTCGTTACAGACATTGATTGTCAATCTCAACAATTATACATTTCTCACCCACAAAACTGTCTTTCTAGTATCTTTTTAACGAACAATTTTTCGTTATTTTATCCATTCTATAATTCAGACTATTTTTACGACGTTCCCTCTAACAGCGACAACGACTTTACTTTCTTTAATTGCTCTTCAGTTGGACAACACCATCTCAGAAACTGGGAACAAACAAGGCCCGGAGAGCAAGATATGTTATCTTGTCCAATTTATGTCGCTGGTTCCGATGAAAGTGTCATTAAGTTGGACTTATTTCCCTGCACCAGAATGTTTGACAAAGTTTTGCCAATGAATTCAGCATATTATATATGGGAAAACCATCTCAGATTGAATTGGTCAGAAAAAACTTTTCCTAGTCATTGTTTACAATATGAAACACACAATAAATTATCAAAGAACACATCCATTATTTTAGTAACAACAGGGGCAATTGTTGGTTCAACTATGCTGGTTGTTTTGATTGGTGCTTTCTTTCGAGTATACTTCTATTTTAAAGCGAAAGGAGAAGATGAAACGAGACTTGAAAACTTTTTGAAGGATTACGAAGCGTCAAAGCCAACAAGATTCTCTTATGCTGATATCAAGAGAATTACAGATCAATTCAAGGAAAAGGTAGGCGAAGGAGCTCATGGAGCTGTATATAAAGGTAAATTGTCGAGTCAAATTGTCGTTGCTGTGAAGATGCTTAATAACGCAGAGGGAGATGGGAGAGAGTTCATAAATGAAGTGGGAACTATGGGGAAAATCCACCATGTTAATGTTGTCCGGTTGCTTGGCTTCTGCGCTGATGGATTTCATCGTGCTTTGGTTTATGATTTTTTCCCGAATGGTTCATTGCAAAATTTCATTTCTCCACCTGACAACAAGGATGCTTTCCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGGCATTGCCATTGGAATTGATTATCTTCACCAAGGTTGTGATCATAGAATTCTTCACTTTGATATCAATCCACACAATGTCTTGTTAGATAACAATTTCATTCCGAAAATATCAGATTTCGGTTTAGCTAAGTTGTGCTCAAAAAATCAAAATACTGTATCGATGACTGCAGCTAGGGGAACATTAGGATACATGGCGCCTGAGGTTTTTTCTAGAAACTTCGGGAATGTTTCTTATAAGTCTGATATATACAGTTACGGTATGTTACTGCTGGAGATAGTTGGAGGAAGAAAGAATACTAAAACAGTCATTAATGATGAAGAAAATTTCGATGTTTTGTATCCCGATTGGATCCACGGTTTACTTGATGGGGGAGACATTCATATCCCAATTGATGAAGAGGGAGAATTCAAAATTGCAAAGAAACTAGCAATTGTAGGACTTTGGTGCATTCAGTGGCACTCCATGCATCGCCCGTCCATGAAAACTGTTGTGCAGATGCTACAAGGAGAAGGAGAGAAGTTAAGCGTTCCGAGCAATCCTTTCAACGCTTCATATTCAACGAATATAACTGCTAATACTGGGACAAGATGTCTGAATTTAGAACTAGATGTGATTCAAGAATTAGACTACAGCAACATCACTTTCTTTAACTGCTCTTCGGTTCGACAACACCATCTCAAAAGCACGGACCAAACATACCCCATTGCACAAGACATGTTGTCTTGTCCAATTTATGTCGCAGATTCCACAGAAAGTGTCGTCGACTTGGACTTGTTACGCTGCACAAGAATGTTTGTTAAAGTTTTGCCAACAGAAGCTTCTGATATAAGGCAAAACATGGTCAGATTGTATTGGTCGGAAACAAATTTTCAGAGTCAATGTTTAGTGCTACACAACAGATCAAAGAAGAACCACACATTCATCATTTTAGAAACAATAGGGGTAATCATTGGTTCAACTATGCTGATTGTTTTGATTGGGGAAGATCAAACGAGACTTGAAAACTTTTTGAAGGATTATGAAGCTTCAAAGCCAACTAGATTCTCTTATGCCGATATCAAGAGAATTACAAACCAATTCAAGGAAAAACTAGGTGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAGTCAAATTCTTGTTGCTGTGAAGATGCTAAATAATACGGATGGAGATGGGAGAGAGTTCATAAATGAAGTGGGAACTATGGGAAAAATCCACCATGTTAACGTTGTTCGATTGCTTGGCTTTTGCGCTGATGGATTCTATCGTGCTTTGGTTTATGACTTTTTCCCAAATGGTTCGCTGCAGAATTTCATTTCTCCACCAAATAACAAAGAAGGTTTCCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGATATTGCTAATGGGATCGAGTATCTTCATCAGGGCTGTGATCATAGAATTCTTCACTTTGATATCAATCCTCATAATGTCTTGTTAGATGACAATTTTATTCCAAAAATATCAGACTTCGGTTTAGCTAAGTTGTGCTCCAAAACTCGAAGTAATGTATCGATGACTGCAGCTAGGGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCGAGAAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGTTACGGTATGTTGCTGCTGGAGATGGTTGGAGGAAGAAAGAATACTAAAACAACTACTGGTGAAGAAAATTTCCATGTTTTGTATCCAGATTGGATTCACGGTTTACTTGAAGGGGGAGACATTCATATCCCAATTGACGAAGATGGAGATTTTAGAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGTATTCAGTGGCACTCTGTGCATCGTCCGTCTATGAAAACTGTGGTGCAGATGCTACATGGAGAGGTAGACAAGTTAAGAGTTCCCACCAATCCTTTCATTGCATCCTCTTCAACTAATAGAAGTGGAAATACTGCTACAGGATGTCTTAAGTTAGAACTAGATGTGATTCAAGAATAA 3141 0.3798 MIHLNMSLTRLPLLLLLLMNLVNGQNNYNSSDECPFRLSCSRNKNQTIEFPAIPVPVKLVVTDIDCQSQQLYISHPQNCLSSIFLTNNFSLFYPFYNSDYFYDVPSNSDNDFTFFNCSSVGQHHLRNWEQTRPGEQDMLSCPIYVAGSDESVIKLDLFPCTRMFDKVLPMNSAYYIWENHLRLNWSEKTFPSHCLQYETHNKLSKNTSIILVTTGAIVGSTMLVVLIGAFFRVYFYFKAKGEDETRLENFLKDYEASKPTRFSYADIKRITDQFKEKVGEGAHGAVYKGKLSSQIVVAVKMLNNAEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFISPPDNKDAFLGWDLLQQIALGIAIGIDYLHQGCDHRILHFDINPHNVLLDNNFIPKISDFGLAKLCSKNQNTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTKTVINDEENFDVLYPDWIHGLLDGGDIHIPIDEEGEFKIAKKLAIVGLWCIQWHSMHRPSMKTVVQMLQGEGEKLSVPSNPFNASYSTNITANTGTRCLNLELDVIQELDYSNITFFNCSSVRQHHLKSTDQTYPIAQDMLSCPIYVADSTESVVDLDLLRCTRMFVKVLPTEASDIRQNMVRLYWSETNFQSQCLVLHNRSKKNHTFIILETIGVIIGSTMLIVLIGEDQTRLENFLKDYEASKPTRFSYADIKRITNQFKEKLGEGAHGAVYKGKLSSQILVAVKMLNNTDGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISPPNNKEGFLGWDLLQQIALDIANGIEYLHQGCDHRILHFDINPHNVLLDDNFIPKISDFGLAKLCSKTRSNVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTTGEENFHVLYPDWIHGLLEGGDIHIPIDEDGDFRIAKKLAIVGLWCIQWHSVHRPSMKTVVQMLHGEVDKLRVPTNPFIASSSTNRSGNTATGCLKLELDVIQE* 1047
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3165 1046 ProSitePatterns Protein kinases ATP-binding region signature. 741 763 IPR017441 GO:0005524
Tpr1g3165 1046 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 22 585 - -
Tpr1g3165 1046 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 589 1046 - -
Tpr1g3165 1046 Pfam Protein kinase domain 737 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3165 1046 Gene3D Phosphorylase Kinase; domain 1 709 809 - -
Tpr1g3165 1046 Gene3D Phosphorylase Kinase; domain 1 246 346 - -
Tpr1g3165 1046 ProSiteProfiles Protein kinase domain profile. 272 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3165 1046 Gene3D Transferase(Phosphotransferase) domain 1 347 557 - -
Tpr1g3165 1046 Gene3D Transferase(Phosphotransferase) domain 1 810 1017 - -
Tpr1g3165 1046 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Tpr1g3165 1046 PANTHER RUST RESISTANCE KINASE LR10-RELATED 22 585 IPR045874 GO:0004672
Tpr1g3165 1046 PANTHER RUST RESISTANCE KINASE LR10-RELATED 589 1046 IPR045874 GO:0004672
Tpr1g3165 1046 ProSiteProfiles Protein kinase domain profile. 735 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3165 1046 SUPERFAMILY Protein kinase-like (PK-like) 716 1006 IPR011009 -
Tpr1g3165 1046 SUPERFAMILY Protein kinase-like (PK-like) 254 544 IPR011009 -
Tpr1g3165 1046 Pfam Protein tyrosine and serine/threonine kinase 274 483 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3165 Tpr-Chr1 36106230 36113415 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3165 215 557 Receptor kinase-like Gene Family AT1G66910 45.690 8.64e-93 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3165 Pkinase 6.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3165 - - adu:110273083 657.136