Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3161 ATGTCACTCACATTACTAGCTCTGCTGCTTCTGCTGTTCATCAGTATTGGAAATGGTCAGAATAACAATAACTCGTCCATTGAATGCCCTTTCCATCTATCTTGTTCGCGTAACATTAATCAGACTCAGATCCTTGAATTCCCCTCATTACCAGTATCAGAAAAATTCATTGTCAATGACATAGATTGCGAATCTCAAGTATTATATCTATCTCACCCACAAAACTGTCTTTCTAGTCTCTTCTTAACAAACAATTTTTCATTATTTTATCCTTTTCGAACCAATTTTCCATATAGTAGCAATATTACTTTCTTTAATTGTTCTTCCGTTCGACAAGACCATCTTAAAAGCTTGGACCAAACAGGCCCCAATGCACAAGACATGTTGTCATGTCCAATTTATGTAGCAGATTCCACAGAAAGTGTCGTCGACTTGGACTTGTTACACTGCACAAGAATGTTTGATAAAGTTTTGCCAATAGAAGCTTATGATATAAGGCATAACATTCTCATATTGAATTGGTCGTATACAAATTTTCCCAGTCAATGTTTCGATCCACACAACAAATCAAAGAAGAACCGCACATCCATTATTTTAGAAACAATAGGGGCAATCATTGGTTCGACTATGCTGGTTGTTTTGATTAGTGTTTTCTTTCGAGTATACTTCTATTTTAGAACGAAAGGGGAAGATCAAACGAGACTTGAAAACTTTTTGAAGGATTATGAAGCTTCAAAGCCAACTAGATTCTCTTATGCCGATATCAAGAGAATTACAAACCAATTCAAGGAAAAACTAGGTGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAGTCAAATTCTGGTTGCTGTGAAAATGCTTAATAACACAGAAGGAGATGGGAGGGAGTTCATAAATGAAGTCGGAACTATGGGGAAAATCCACCATGTTAATGTTGTCCGGTTGCTTGGTTTCTGCGCCGATGGATTTTATCGTGCTTTGGTGTATGACTTTTTTCCGAATGGTTCTTTACAAAATTTCATTTCTCCACCCGACAACAATGATGCTTTCCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGGCATTGCAAACGGAATTGAATATCTTCACCAGGGTTGTGATCATAGAATTCTTCACTTTGATATAAATCCTCACAATGTCTTGTTAGATGAAAATTTCATTCCTAAAATTTCAGACTTCGGTTTAGCTAAGTTATGCTCCAAAAATCAAAATACTGTTTCGTTGACAGCAGCTAGGGGAACATTAGGGTACATGGCACCTGAGGTTTTTTCTAGGAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGCTACGGTATGTTGCTTCTCGAGATGGTTGGAGGAAGAAAGAATACTAAAACAACTACTGGTGAAGAAAATTTCCAAGTTTTGTATCCAGATTGGATCCATGGTTTACTCGAAGGGGGTGACATTCATATCCCAATTGACGATGAGGGAGATTTTAGAATTGGAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAGTGGCACTCTGTGCATCGTCCGTCTATGAAAGCTGTGGTGCAGATGCTACAAGGAGAGGTAGACAAGTTAAAAGTGCCCACCAATCCTTTCAATGCCTCATCTTCAACTAGTAGAACTGCAAATACTGATATAGGATGTCTGAATTTAGAACTAGATGTGATTCAAGAGTTAAAAAGTTTTGCCAATAGAAGCTTATGTTATTATGTTATAAGGGACAACGGAATCTCCGTGAGTTGGTCTGAAACAAATTTTGACAGTCAATGTTTAGATGATCAATATGAGCTACCGCTACCCAAGAAATCAAAGAAGAACGACAAATCGATTATTTTAGTAACAACAGGGGCGATCGTTGGTTCAAGTATGCTGGTTGTTTTGATTGGCGTTTTCTTTCGAGTATACTTCTATTTTAGGACGAAAGGGGAAGATCAAACGAGACTTGAAAACTTTTTGAAGGATTACGAAGCTTCAAAGCCAACAAGATTCTCTTATGCTGATATTAAAAGAATTACAAATCAATTCAAGGAAAAACTAGGCGAAGGTGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAGTCAAATTCATGTTGCTGTGAAGATGCTTAATAATACAGAAGGTGATGGGAGAGAGTTCATAAATGAAGTGGGAACTATGGGAAAAATTCACCATGTTAATGTTGTTCGATTGCTTGGCTTTTGTGCCGATGGATTTCATCGTGCTTTGGTTTATGACTTTTTCCCAAACGGTTCACTGCAGAATTTCATTTCTTCACCCAATAACAAAGATGATTTTCTTGGTTGGGACTTATTGCAACAAATAGCTCTAGGCATTGCCATTGGAATTGAGTATCTTCACCAGGGTTGTGATTATAGAATTCTTCACTTTGATATCAATCCTCACAATGTCTTGTTGGATGAAAATTTAATTCCAAAAATATCGGATTTCGGTTTAGCTAAGCTGTGCTCCAAAAATCAAAATACTGTTTCGATGACTGCAGCTAGGGGAACATTAGGGTACATAGCACCTGAGGTTTTTTCTAGAAACTTTGGAAATGTCTCTTATAAGTCTGATATATACAGCTATGGTATGTTGTTGCTCGAGATGGTTGGAGGAAGAAAGAATACAAAAACAATTACCGGAGAAGAAAATTTCCCAGTTTTGTATCCGGATTGGATCCACGGTTTACTTGAAGGGAAAGACATTCATATCCCAATTGACGAAGATGGAGATTTTAGAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAGTGGCACTCCGTGCATCGTCCAAACATGAAAAATGTGGTGCAGATGTTACAAGGAGAGGTAGAGAAGTTAAAAGTTCCCACAAATCCTTTCAATGCTTCAGCATCTTCAACTAATAGAACTACAAATACTGCTACAGGAGGTTTTCTGAATACAGAACTAGATGTGATTCAAGAATTAGAATAG 3006 0.3743 MSLTLLALLLLLFISIGNGQNNNNSSIECPFHLSCSRNINQTQILEFPSLPVSEKFIVNDIDCESQVLYLSHPQNCLSSLFLTNNFSLFYPFRTNFPYSSNITFFNCSSVRQDHLKSLDQTGPNAQDMLSCPIYVADSTESVVDLDLLHCTRMFDKVLPIEAYDIRHNILILNWSYTNFPSQCFDPHNKSKKNRTSIILETIGAIIGSTMLVVLISVFFRVYFYFRTKGEDQTRLENFLKDYEASKPTRFSYADIKRITNQFKEKLGEGAHGAVYKGKLSSQILVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISPPDNNDAFLGWDLLQQIALGIANGIEYLHQGCDHRILHFDINPHNVLLDENFIPKISDFGLAKLCSKNQNTVSLTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTTGEENFQVLYPDWIHGLLEGGDIHIPIDDEGDFRIGKKLAIVGLWCIQWHSVHRPSMKAVVQMLQGEVDKLKVPTNPFNASSSTSRTANTDIGCLNLELDVIQELKSFANRSLCYYVIRDNGISVSWSETNFDSQCLDDQYELPLPKKSKKNDKSIILVTTGAIVGSSMLVVLIGVFFRVYFYFRTKGEDQTRLENFLKDYEASKPTRFSYADIKRITNQFKEKLGEGAHGAVYKGKLSSQIHVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFHRALVYDFFPNGSLQNFISSPNNKDDFLGWDLLQQIALGIAIGIEYLHQGCDYRILHFDINPHNVLLDENLIPKISDFGLAKLCSKNQNTVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTITGEENFPVLYPDWIHGLLEGKDIHIPIDEDGDFRIAKKLAIVGLWCIQWHSVHRPNMKNVVQMLQGEVEKLKVPTNPFNASASSTNRTTNTATGGFLNTELDVIQELE* 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3161 1001 PANTHER RUST RESISTANCE KINASE LR10-RELATED 17 573 IPR045874 GO:0004672
Tpr1g3161 1001 PANTHER RUST RESISTANCE KINASE LR10-RELATED 581 1001 IPR045874 GO:0004672
Tpr1g3161 1001 Gene3D Transferase(Phosphotransferase) domain 1 761 976 - -
Tpr1g3161 1001 Gene3D Transferase(Phosphotransferase) domain 1 335 548 - -
Tpr1g3161 1001 Pfam Protein tyrosine and serine/threonine kinase 261 472 IPR001245 GO:0004672|GO:0006468
Tpr1g3161 1001 Pfam Protein tyrosine and serine/threonine kinase 687 897 IPR001245 GO:0004672|GO:0006468
Tpr1g3161 1001 ProSiteProfiles Protein kinase domain profile. 686 972 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3161 1001 Gene3D Phosphorylase Kinase; domain 1 660 760 - -
Tpr1g3161 1001 Gene3D Phosphorylase Kinase; domain 1 234 334 - -
Tpr1g3161 1001 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 581 1001 - -
Tpr1g3161 1001 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 17 573 - -
Tpr1g3161 1001 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Tpr1g3161 1001 SUPERFAMILY Protein kinase-like (PK-like) 241 531 IPR011009 -
Tpr1g3161 1001 ProSitePatterns Protein kinases ATP-binding region signature. 692 714 IPR017441 GO:0005524
Tpr1g3161 1001 ProSiteProfiles Protein kinase domain profile. 260 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3161 1001 SUPERFAMILY Protein kinase-like (PK-like) 667 957 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3161 Tpr-Chr1 36088877 36097486 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3161 652 970 Receptor kinase-like Gene Family AT1G66910 48.923 1.44e-95 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3161 PK_Tyr_Ser-Thr 3.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3161 - - mtr:MTR_1g031540 681.789