Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3159 ATGAAACTGTTTTTGATTGGAACAAATAGTTTGATCAGGCTACTGATTCTTCTCCAGCTTATCAATAGCATCCATGGTCACAACGAGTGCAGAGAATCATCGTGTGGACCTTACAACCTGTTTAATATTCGATTCCCCTTCCAACTTGTTAAGGAATCACAAGATCGATGTGTTTATCCTGAGTTTTGCCTATATTGTACTGAAAACAAGAGAACCATGATGGTGCTCTCAACCACTTCAGGTCCTATCAAATTCCTTGTCTATGGCATAGACTACGAATCAAACAGAATTTTAATATCAGACCTGGATAATTGCATTGCCAAAACGTTTCTGACACTTAACAATTCATCATTTCTACCTTACCGATTTTATTCAGAATCAGAAACAACAAAATTATCTTTCTTCAATTGTTCTTCAGTTAGGAAACATCACTTGAGAAATGTTTATCAAATATCCGATGAGTCTCAAGATATAATCACTTGTCCAATATATGTTTCTCATTCCTACGACAGTGTTCTCGATTTGGACCTTGCATCGTGTACCAAGATGTTTGACGTGTCAACCACCCTACACGACCTGAAATATAATTTACTCACTCTAAGTTGGCCTAAACAAAATTGTACAGAGTGCGAAGCGAAAGGCATGAAATGCAAATGGAAGAACAACGACACAAAAGGAGACACAGAATGTTTTGATTGCAACAACAAAAGGAAAACAATTCAAATTCCAAAATCACTTATATACGCCTCAACAGGTTCAATTCTTATGGGTCTGGTTCTCATTGCATTATTTAAGATACATCTGTATTTTAGAAAGAAAGAAGAGGATCAAGTTAGAGTTGATAAGTTCTTAGAGGATTATAGAGCACAGAAGCCCACTAGATTTTCCTATGCTGATATAAAAAGAATTACGAATGGATTTAAGGAAAAACTTGGAGAAGGAGCTCATGGAACTGTGTTTAAAGGACAGCTCTCAAGTGAGATACTTGTGGCTGTTAAAATTCTCAACAATACATCGGGAGAAGGTAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATTCACCACATCAATGTTGTTCGCTTGCTTGGATTTTGTGCAGATGGAGTTCACCGTGCTCTTGTCTACAATTTGTTTTCAAATGGTTCGCTACAAAGTTTCATATTTTCACCCGATAACAAAGACCATTTCATGGGGTGGACGAAGCTACAACAAATTGCCATTGGTATTGCCAAAGGAATCGAGTATCTTCATCAAGGTTGTAACAACCCAATCATTCACTTTGACATCAACCCTCACAATGTTTTGCTAGATGACTCATTCACTCCAAAAATCTCAGATTTCGGTCTGGCCAAATTATGTTCAAAGAATCTTAGTGTTGTTTCCATGACGGCTGCTAAGGGAACATTGGGATACATGGCACCAGAAGTTCTATCAAGAAATTTTGGGAATGTGTCACTTAAATCAGATATTTACAGTTATGGAATGTTGGTTCTAGAAATGGTTGGAGGGAGAAAGAATGTAGACATGTCATCGTCTGCAGAAACTTTTAACGTGTTATATCCAGAATGGATCCATAACTTATTGGAAGGTGATGTACATATTCATATTGAGGATGAAAGTGATGTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCTATAAACCGCCCATCGATAAAAAATGTTGTGCAAATGTTGGAAACAAGAGAGGACATCCAGTTAATTGTGCCTCCTAATCCTTTTCACTCGACGACTTCGATGACAACTAATGATCAATACCATTTGGCAAGAAGTACTTTCAAAATGGAAGTGATTCAAGAATAA 1851 0.3706 MKLFLIGTNSLIRLLILLQLINSIHGHNECRESSCGPYNLFNIRFPFQLVKESQDRCVYPEFCLYCTENKRTMMVLSTTSGPIKFLVYGIDYESNRILISDLDNCIAKTFLTLNNSSFLPYRFYSESETTKLSFFNCSSVRKHHLRNVYQISDESQDIITCPIYVSHSYDSVLDLDLASCTKMFDVSTTLHDLKYNLLTLSWPKQNCTECEAKGMKCKWKNNDTKGDTECFDCNNKRKTIQIPKSLIYASTGSILMGLVLIALFKIHLYFRKKEEDQVRVDKFLEDYRAQKPTRFSYADIKRITNGFKEKLGEGAHGTVFKGQLSSEILVAVKILNNTSGEGKEFINEVGIMGKIHHINVVRLLGFCADGVHRALVYNLFSNGSLQSFIFSPDNKDHFMGWTKLQQIAIGIAKGIEYLHQGCNNPIIHFDINPHNVLLDDSFTPKISDFGLAKLCSKNLSVVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLVLEMVGGRKNVDMSSSAETFNVLYPEWIHNLLEGDVHIHIEDESDVKIAKKLAIVGLWCIQWQPINRPSIKNVVQMLETREDIQLIVPPNPFHSTTSMTTNDQYHLARSTFKMEVIQE* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3159 616 ProSiteProfiles Protein kinase domain profile. 305 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3159 616 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 616 IPR045874 GO:0004672
Tpr1g3159 616 Gene3D Phosphorylase Kinase; domain 1 278 379 - -
Tpr1g3159 616 Pfam Wall-associated receptor kinase galacturonan-binding 30 101 IPR025287 GO:0030247
Tpr1g3159 616 PANTHER RECEPTOR-LIKE KINASE 18 616 - -
Tpr1g3159 616 Pfam Protein kinase domain 308 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3159 616 SUPERFAMILY Protein kinase-like (PK-like) 288 577 IPR011009 -
Tpr1g3159 616 Gene3D Transferase(Phosphotransferase) domain 1 380 585 - -
Tpr1g3159 616 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3159 Tpr-Chr1 36066576 36069998 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3159 10 589 Receptor kinase-like Gene Family AT1G66910 33.073 8.22e-99 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3159 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3159 - - gmx:100790964 835.869