Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3157 ATGGCGTTGACAGGAGCACATAGTTTGATCACGCTGCTGCTTCTACTGCTTATCCATCACGGCAGCAGTCATGACGAATACTGCAGAGAATTGTCTTGTGGACCTGACGAACCGATTGTTCAGTTTCCCTTCCAACTCGTTAAGGAATCGTCACAAGATCAATGTGTTTATCCTGAGTTTTGCCTATATTGTACTCCAAACAAGAACACCATGATGGTGCTCTCTACTACTTCAGGTCCAATCAAATTCCTTGTCTATAAAATAGACTACGAATCAAACCGAATTTCAATTTCGGACCCAGATGATTGCATTTCCGAAAAGTTTCTCAAACTTATCAATTCATCATTTCTACCTTACCGATTTTATTCAGAATCAGAAACAACAAAATTATCTATCTTCAATTGCTCTTCGGTTAAGTATAGACACCTGAGAAATGAAGATCAATCATCCTCAATGTCACAAGACATGATCACCTGTCCAATTTACCTTTCTAGGTCCTACGACAGTGTCCTTGCATTGGACCTTGTATCGTGTACCAAGATGTTCGATGTTTCAATCATATCCGTGCAAGAATGCGGATCACCTTGGTCACTCAGTTTGAGTTGGTCCAAACAAAATTGTACAGAGTGTGAAGCAAAAGGCATGAAATGCAAATGGAAGAACAACTACACCAAAGGTGAAACTCAATGTTTTGATTGTAACAACAAACGGAAAACAATCCAAATTCCAAAATCTCTTATATACATCTCTGCAGGTTCGATTCTTATGGGTCTGGTTCTCATCGCATTATTTAAGATACATCTGTATTTTAGAAAGAAAGAAGAGGATCAAGTTAGAGTTGATAAGTTCTTAGAGGATTATAGAGCACAAAAGCCTACTAGATTTTCCTATGCTGATATAAAAAGAATTACAAATGGATTTAAGGAAAAACTTGGAGAAGGAGCTCATGGAACTGTGTTTAAAGGAAAGCTCTCGAGTGAGATACTTGTGGCTGTGAAAATGCTCAACAATAAAGAGGGAGAAGGTAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATTCACCACATCAATGTTGTTCGCTTGCTTGGTTTCTGTGCTGATGGAATCCACCGTGCTCTTGTCTACAATTTGTTTCCAAATGGTTCGCTACAGAGTTTCATATTTCCACCCGATAACAAAGACAATTTCATTGGGTGGGCGAAGCTACAACAAATTGCCATTGGTATAGCTAAAGGAATCGAGTATCTTCATCAGGGTTGTAACCGGCCAATCATTCACTTCGACATCAACCCTCACAATGTTTTGCTAGACGACTCCTTCACTCCAAAAATCTCAGATTTCGGTCTCGCCAAATTATGTTCAAAGAATCTTAGTGTTGTTTCCATGACGGCTGCTAAGGGAACCTTGGGATACATGGCGCCTGAAGTTCTATCAAGAAATTTTGGAAATGTGTCTCTTAAGTCGGATATTTACAGTTACGGAATGTTGTTGCTTGAAATGGTTGGGGGGAGAAAGAATGTAGACATGTCGTCATCGGTAGAAACTTTTAATGATGTGTTATATCCAGAATGGATCCATAACTTATTGGAAGGAGATGTACATATTCACATTGAGGATGAAAATGATGTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCAATAAACCGTCCATCGATAAAAAATGTTGTGCAAATGTTAGACACCGGAGAGGACATCCAGTTAATTGTGCCTCCTAATCCTTTTCACTCGACATCGTCCATGACTGCTAATGATGAACACACTTTGGCAAGGAGAAGTTTCCAAATGGAAGTCATTCAAGAATAA 1854 0.39 MALTGAHSLITLLLLLLIHHGSSHDEYCRELSCGPDEPIVQFPFQLVKESSQDQCVYPEFCLYCTPNKNTMMVLSTTSGPIKFLVYKIDYESNRISISDPDDCISEKFLKLINSSFLPYRFYSESETTKLSIFNCSSVKYRHLRNEDQSSSMSQDMITCPIYLSRSYDSVLALDLVSCTKMFDVSIISVQECGSPWSLSLSWSKQNCTECEAKGMKCKWKNNYTKGETQCFDCNNKRKTIQIPKSLIYISAGSILMGLVLIALFKIHLYFRKKEEDQVRVDKFLEDYRAQKPTRFSYADIKRITNGFKEKLGEGAHGTVFKGKLSSEILVAVKMLNNKEGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNLFPNGSLQSFIFPPDNKDNFIGWAKLQQIAIGIAKGIEYLHQGCNRPIIHFDINPHNVLLDDSFTPKISDFGLAKLCSKNLSVVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYSYGMLLLEMVGGRKNVDMSSSVETFNDVLYPEWIHNLLEGDVHIHIEDENDVKIAKKLAIVGLWCIQWQPINRPSIKNVVQMLDTGEDIQLIVPPNPFHSTSSMTANDEHTLARRSFQMEVIQE* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3157 617 ProSiteProfiles Protein kinase domain profile. 305 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3157 617 Gene3D Transferase(Phosphotransferase) domain 1 380 585 - -
Tpr1g3157 617 Pfam Protein kinase domain 308 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3157 617 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 617 IPR045874 GO:0004672
Tpr1g3157 617 Pfam Wall-associated receptor kinase galacturonan-binding 28 99 IPR025287 GO:0030247
Tpr1g3157 617 Gene3D Phosphorylase Kinase; domain 1 278 379 - -
Tpr1g3157 617 SUPERFAMILY Protein kinase-like (PK-like) 288 576 IPR011009 -
Tpr1g3157 617 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Tpr1g3157 617 PANTHER RECEPTOR-LIKE KINASE 18 617 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3157 Tpr-Chr1 36056029 36058525 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3157 1 590 Receptor kinase-like Gene Family AT1G66910 31.832 5.61e-96 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3157 Pkinase 3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3157 - - gmx:100811907 830.476