Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3156 ATGTGGTGGATGAGAGTGATATTGGTACTACTGTTTCCATTTTTGCTTATACTACAGCAAGGTAGTAGTAGTACTATTGAGCAAGAGCATACATGTCAACCTTCATCTTGTGGTAAAATTTCCAGTATAAGTTATCCATTCCGATTAACAGATGACCTGAAACACTGCGGAGATAACCGGTATGAGCTATCATGTGAAAATAATGTGACAACTTTATATTTATACTCTGCAAAATATCATGTCCAGTCCATCAATTACAACAATTTCACAATCAGACTGGTTGATCCTGGAGTTCAAGAATCTAATTGCTCTTCACTTCCTCTCAATTTCTTGTCGCAGTCAAATTTCTGTGATACTTATGAACTTGGGAAGAAATATTGCATGGATCCATACCAAGCATTGGGATATTATGGTGATGAACTTGTTTTCGAGCATATAGTATACTTGAATTGTAGCCATCAAGTTACTAACAATCATAAATATGTGAATACTACTTCGTGTCTCGATCAGAACTCGGAAGGGTATTATATTTATGCTATGGCTGGTGATTTAATTGCTCAAGATTTTCAAGTTGGTTGTCATGTAAAATTGGTTACACCAACTTCTTGGTTGAAAAATTTGGAAAGAAATCAAGAAATTTCTTCCTATGATTTCATTCATAAGGCGTTAGTGTATGGATTTGAGATTTCATGGTTGAATCTTCCATGTAAGAATCTTCAATGTGGAGATTCGATACGTTGCATCTTCAATTCCAACCAGAAAGTTCTATGCTATGATCGCCCCTGCAATAAATCCTGGGGAGGAATGACATTGTTTATTGCCTTATTGATATGCAAATGGAGGAAAAGGCATTTGTCAATTTTTGAATATATTGAAATATATCTACAACAACAAAACAATCTCATGCCCATTGGATATTCATACAAAGAAATCAAGAAAATGGCTAAAGGTTTCAAAGACAAGTTGGGTGAAGGAGGCTTTGGTACCGTGTTCAAGGGGAACCTACGAAGTGGGCCTTGTGTGGCAATCAAGATGTTGGCTATGTCGAAAGGAAATGGACAAGACTTTATTAGTGAAGTAGCAACTATCGGAAGGATACATCATTTGAATGTCGTGCAATTAATCGGATTTTGTGCTGAGGGATCCAAACGTGCTCTTGTTTATGAATTCATGCCTAATGGATCTCTTGATAAATTCATTTTTTCCAAAGAAGGAAGCAAAAATATAAGCTATAGCCAAATTTTCGACATATCAATTGGAGTAGCTCGTGGAATTGCTTATCTTCACCATGGATGCGAAATGAAGATTTTGCATTTTGATATCAAGCCTCACAACATTCTTCTTGATGAGAACTTCACCCCAAAAGTCTCTGACTTTGGATTGGCCAAGCTATATTCGGTAGAGAATAGCATTATCACAATGACTGCAGCAAGAGGTACAATTGGATATATGGCTCCAGAATTGTTCTACCAAAATATTGGAGGAGTATCTTATAAGGCTGATGTTTATAGCTTTGGAATGCTTTTAATGGAGATGGCAAACAAAAGGAAAAACCTAAATGCCAAGGCAGAGCGTTCGAGCCAACTTTACTTTCCTTTATGGATTTATGATCAAGTTGAAAAAGGGAAAGACATAGAAATGGAAGATACTACCGAGGAAGAAAAGAAAATAGTAAAAAAGATGATCATAGTTGCACTTTGGTGTATACAATTAAAACCAGATGATCGTCCATCAATGAACAATGTAGTGGAGATGCTACAAGGAAATATTGAAAGCCTTAACATACCTCCAAAGCCAACCCTTTATCCAGATGACACAATTACAAATGACGAAAGAAACAACTTTGATCAAAGAAGTTCGAGTAATTACACTAGTTCTTATGATTCTGTGGAAATATCAACTAATTCTCTAGTAGAGAATATTGCTTGA 1929 0.3603 MWWMRVILVLLFPFLLILQQGSSSTIEQEHTCQPSSCGKISSISYPFRLTDDLKHCGDNRYELSCENNVTTLYLYSAKYHVQSINYNNFTIRLVDPGVQESNCSSLPLNFLSQSNFCDTYELGKKYCMDPYQALGYYGDELVFEHIVYLNCSHQVTNNHKYVNTTSCLDQNSEGYYIYAMAGDLIAQDFQVGCHVKLVTPTSWLKNLERNQEISSYDFIHKALVYGFEISWLNLPCKNLQCGDSIRCIFNSNQKVLCYDRPCNKSWGGMTLFIALLICKWRKRHLSIFEYIEIYLQQQNNLMPIGYSYKEIKKMAKGFKDKLGEGGFGTVFKGNLRSGPCVAIKMLAMSKGNGQDFISEVATIGRIHHLNVVQLIGFCAEGSKRALVYEFMPNGSLDKFIFSKEGSKNISYSQIFDISIGVARGIAYLHHGCEMKILHFDIKPHNILLDENFTPKVSDFGLAKLYSVENSIITMTAARGTIGYMAPELFYQNIGGVSYKADVYSFGMLLMEMANKRKNLNAKAERSSQLYFPLWIYDQVEKGKDIEMEDTTEEEKKIVKKMIIVALWCIQLKPDDRPSMNNVVEMLQGNIESLNIPPKPTLYPDDTITNDERNNFDQRSSSNYTSSYDSVEISTNSLVENIA* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3156 642 SUPERFAMILY Protein kinase-like (PK-like) 297 586 IPR011009 -
Tpr1g3156 642 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 7 254 - -
Tpr1g3156 642 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 268 616 - -
Tpr1g3156 642 Gene3D Transferase(Phosphotransferase) domain 1 391 595 - -
Tpr1g3156 642 Coils Coil 509 529 - -
Tpr1g3156 642 Pfam Wall-associated receptor kinase galacturonan-binding 32 95 IPR025287 GO:0030247
Tpr1g3156 642 ProSiteProfiles Protein kinase domain profile. 316 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3156 642 SMART serkin_6 316 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3156 642 ProSitePatterns Protein kinases ATP-binding region signature. 322 344 IPR017441 GO:0005524
Tpr1g3156 642 Pfam Protein kinase domain 319 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3156 642 Gene3D Phosphorylase Kinase; domain 1 294 390 - -
Tpr1g3156 642 PANTHER RUST RESISTANCE KINASE LR10-RELATED 268 616 IPR045874 GO:0004672
Tpr1g3156 642 PANTHER RUST RESISTANCE KINASE LR10-RELATED 7 254 IPR045874 GO:0004672
Tpr1g3156 642 ProSitePatterns Serine/Threonine protein kinases active-site signature. 436 448 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3156 Tpr-Chr1 36048027 36050698 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3156 15 602 Receptor kinase-like Gene Family AT5G38260 38.336 7.35e-125 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3156 Pkinase 4.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3156 - - gmx:100781099 797.349