Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3155 ATGATCAGGCTACTGCTTCTTCTCCTGCTTATCAACAATGGCAGCAGTCATGACGAGTGCAAAGAATTATCTTGTGGACCTAACGAACCGCTTATTAGTTTTCCCTTCCAACTTGTTAAAGGGTCACAAGATCAATGTGCTTATCCTGAGTTTTGCCTATATTGTACTCAATATAACAAAACCATGATTGTGCTCTCTACCACTTCAGGTCTTGTTAACTTCTTTGTCTCTAATATTATCTACGAAATACGCTTGCTTTCAATTTCGGATCCAGAGAATTGCCTTCCGAATAAGTTTTTGAAACTTAACAATTCATCATTTCTACCTTACCAATTTTATTCACTATCAGAAACAAAATATTCCTTCTTCAATTGCTCTTCATCTAGGAAACAACACTTAAGAAACATTGAGCAAACGTATTTAAATTCACAAGATATGATCACATGTCCAATTTACGCCTCTAATTCCCAAGACAGTGTCCTCACATTAGACCTTGTATCATGTACCAAGATGTTTGACGTTCAAATGTCCACCGCGGCAGAATACTTGTCGTATAATCAACTGCGTTTGAGTTGGCCCAGACTAAATTGTACAGAGTGTGAAGCGAAAGGCATGACATGCAAATGGAAGAACAATAGCACGAAAGGCGAAACTGAATGTTTTGATTGCAACAATAAACGGAAAACAATTCAAATTCCAAATTCTCTTATATATGCTTCTACAGTTAAGGTTTTTCTAGGTTCAATTTTTTTGGCGCTGGTGCTCATCGCATTATTTAAGATACATCTCTATTTTAGAAAGAAAGAAGAGGATCAAATTAGAGTTGATAAATTTTTAGAGGATTATAAAGCACAAAAGCCTACAAGATTTTCATATGCTGATTTAAAAAGAATCACGGGCGGGTTTAAGGAAAAGCTTGGCGAAGGAGCTCACGGAACTGTGTTCAAAGGAAAGCTCTCAAGCGAGATACTTGTGGCTGTGAAAATGCTCAACAATACATCGGGAGAAGGAAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATTCACCACATCAATGTCGTTCGCTTGCTTGGTTTTTGTGCTGATGGAATCCACCGTGCTCTTGTCTACAATTTTTTTCCAAATGGTTCGCTACAAAGTTTCATATTTCCACCCGACAACAAAGACCATTTCATGGGGTGGGAGAAGCTGCAACAAATTGGTATTGGTATAGCCAAAGGAATTGAGTATCTTCATCAGGGTTGTAACCATCCAATCATTCACTTTGACATCAACCCTCACAATGTTTTGTTAGATTGCTCCTTCACTCCAAAAATTTCGGATTTCGGTCTTGCCAAATTATGTTGCAAGAATCGTAGTGCTGTGTCCATGACAGCTGCTAAGGGAACCTTGGGATACATGGCTCCTGAAGTTCTATCAAGAAATTTTGGGAATGTGTCTCTTAAGTCAGATATTTACCGTTACGGAATATTGTTGCTAGAAATGGTTGGAGGGAGAAAAAATGTAGACATTTCATCAGCAGAAGCTTTTCATGTGTTATATCCAGAATGGATCCATAACTTATTAGAAGGAGATGTACATATTCATATTGAGGATGAAAGTGATGTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCAATAAACCGTCCATCGATAAAAACTGTTGTGCAAATGTTGAAAACCGGAGAGGATATTCAGTTAATGGTACCTCCTAATCCTTTTCGCTCGATGACTTCAATGACCAATAATGATCAATGCACTTTGGCAAGAACAACTTTCCAAATGGAAGTGATTCATGAATAA 1833 0.377 MIRLLLLLLLINNGSSHDECKELSCGPNEPLISFPFQLVKGSQDQCAYPEFCLYCTQYNKTMIVLSTTSGLVNFFVSNIIYEIRLLSISDPENCLPNKFLKLNNSSFLPYQFYSLSETKYSFFNCSSSRKQHLRNIEQTYLNSQDMITCPIYASNSQDSVLTLDLVSCTKMFDVQMSTAAEYLSYNQLRLSWPRLNCTECEAKGMTCKWKNNSTKGETECFDCNNKRKTIQIPNSLIYASTVKVFLGSIFLALVLIALFKIHLYFRKKEEDQIRVDKFLEDYKAQKPTRFSYADLKRITGGFKEKLGEGAHGTVFKGKLSSEILVAVKMLNNTSGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNFFPNGSLQSFIFPPDNKDHFMGWEKLQQIGIGIAKGIEYLHQGCNHPIIHFDINPHNVLLDCSFTPKISDFGLAKLCCKNRSAVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYRYGILLLEMVGGRKNVDISSAEAFHVLYPEWIHNLLEGDVHIHIEDESDVKIAKKLAIVGLWCIQWQPINRPSIKTVVQMLKTGEDIQLMVPPNPFRSMTSMTNNDQCTLARTTFQMEVIHE* 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3155 610 SUPERFAMILY Protein kinase-like (PK-like) 284 569 IPR011009 -
Tpr1g3155 610 Pfam Wall-associated receptor kinase galacturonan-binding 20 90 IPR025287 GO:0030247
Tpr1g3155 610 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 610 IPR045874 GO:0004672
Tpr1g3155 610 Pfam Protein tyrosine and serine/threonine kinase 302 569 IPR001245 GO:0004672|GO:0006468
Tpr1g3155 610 Gene3D Phosphorylase Kinase; domain 1 274 374 - -
Tpr1g3155 610 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Tpr1g3155 610 Gene3D Transferase(Phosphotransferase) domain 1 375 578 - -
Tpr1g3155 610 ProSiteProfiles Protein kinase domain profile. 300 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3155 610 PANTHER RECEPTOR-LIKE KINASE 10 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3155 Tpr-Chr1 36044171 36046161 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3155 23 583 Receptor kinase-like Gene Family AT1G66910 33.116 7.16e-92 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3155 PK_Tyr_Ser-Thr 2.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3155 - - gmx:100811907 840.106