Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3155 | ATGATCAGGCTACTGCTTCTTCTCCTGCTTATCAACAATGGCAGCAGTCATGACGAGTGCAAAGAATTATCTTGTGGACCTAACGAACCGCTTATTAGTTTTCCCTTCCAACTTGTTAAAGGGTCACAAGATCAATGTGCTTATCCTGAGTTTTGCCTATATTGTACTCAATATAACAAAACCATGATTGTGCTCTCTACCACTTCAGGTCTTGTTAACTTCTTTGTCTCTAATATTATCTACGAAATACGCTTGCTTTCAATTTCGGATCCAGAGAATTGCCTTCCGAATAAGTTTTTGAAACTTAACAATTCATCATTTCTACCTTACCAATTTTATTCACTATCAGAAACAAAATATTCCTTCTTCAATTGCTCTTCATCTAGGAAACAACACTTAAGAAACATTGAGCAAACGTATTTAAATTCACAAGATATGATCACATGTCCAATTTACGCCTCTAATTCCCAAGACAGTGTCCTCACATTAGACCTTGTATCATGTACCAAGATGTTTGACGTTCAAATGTCCACCGCGGCAGAATACTTGTCGTATAATCAACTGCGTTTGAGTTGGCCCAGACTAAATTGTACAGAGTGTGAAGCGAAAGGCATGACATGCAAATGGAAGAACAATAGCACGAAAGGCGAAACTGAATGTTTTGATTGCAACAATAAACGGAAAACAATTCAAATTCCAAATTCTCTTATATATGCTTCTACAGTTAAGGTTTTTCTAGGTTCAATTTTTTTGGCGCTGGTGCTCATCGCATTATTTAAGATACATCTCTATTTTAGAAAGAAAGAAGAGGATCAAATTAGAGTTGATAAATTTTTAGAGGATTATAAAGCACAAAAGCCTACAAGATTTTCATATGCTGATTTAAAAAGAATCACGGGCGGGTTTAAGGAAAAGCTTGGCGAAGGAGCTCACGGAACTGTGTTCAAAGGAAAGCTCTCAAGCGAGATACTTGTGGCTGTGAAAATGCTCAACAATACATCGGGAGAAGGAAAAGAGTTCATCAATGAAGTGGGAATTATGGGCAAAATTCACCACATCAATGTCGTTCGCTTGCTTGGTTTTTGTGCTGATGGAATCCACCGTGCTCTTGTCTACAATTTTTTTCCAAATGGTTCGCTACAAAGTTTCATATTTCCACCCGACAACAAAGACCATTTCATGGGGTGGGAGAAGCTGCAACAAATTGGTATTGGTATAGCCAAAGGAATTGAGTATCTTCATCAGGGTTGTAACCATCCAATCATTCACTTTGACATCAACCCTCACAATGTTTTGTTAGATTGCTCCTTCACTCCAAAAATTTCGGATTTCGGTCTTGCCAAATTATGTTGCAAGAATCGTAGTGCTGTGTCCATGACAGCTGCTAAGGGAACCTTGGGATACATGGCTCCTGAAGTTCTATCAAGAAATTTTGGGAATGTGTCTCTTAAGTCAGATATTTACCGTTACGGAATATTGTTGCTAGAAATGGTTGGAGGGAGAAAAAATGTAGACATTTCATCAGCAGAAGCTTTTCATGTGTTATATCCAGAATGGATCCATAACTTATTAGAAGGAGATGTACATATTCATATTGAGGATGAAAGTGATGTTAAAATTGCAAAGAAACTTGCAATTGTTGGACTTTGGTGCATTCAATGGCAACCAATAAACCGTCCATCGATAAAAACTGTTGTGCAAATGTTGAAAACCGGAGAGGATATTCAGTTAATGGTACCTCCTAATCCTTTTCGCTCGATGACTTCAATGACCAATAATGATCAATGCACTTTGGCAAGAACAACTTTCCAAATGGAAGTGATTCATGAATAA | 1833 | 0.377 | MIRLLLLLLLINNGSSHDECKELSCGPNEPLISFPFQLVKGSQDQCAYPEFCLYCTQYNKTMIVLSTTSGLVNFFVSNIIYEIRLLSISDPENCLPNKFLKLNNSSFLPYQFYSLSETKYSFFNCSSSRKQHLRNIEQTYLNSQDMITCPIYASNSQDSVLTLDLVSCTKMFDVQMSTAAEYLSYNQLRLSWPRLNCTECEAKGMTCKWKNNSTKGETECFDCNNKRKTIQIPNSLIYASTVKVFLGSIFLALVLIALFKIHLYFRKKEEDQIRVDKFLEDYKAQKPTRFSYADLKRITGGFKEKLGEGAHGTVFKGKLSSEILVAVKMLNNTSGEGKEFINEVGIMGKIHHINVVRLLGFCADGIHRALVYNFFPNGSLQSFIFPPDNKDHFMGWEKLQQIGIGIAKGIEYLHQGCNHPIIHFDINPHNVLLDCSFTPKISDFGLAKLCCKNRSAVSMTAAKGTLGYMAPEVLSRNFGNVSLKSDIYRYGILLLEMVGGRKNVDISSAEAFHVLYPEWIHNLLEGDVHIHIEDESDVKIAKKLAIVGLWCIQWQPINRPSIKTVVQMLKTGEDIQLMVPPNPFRSMTSMTNNDQCTLARTTFQMEVIHE* | 611 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3155 | 610 | SUPERFAMILY | Protein kinase-like (PK-like) | 284 | 569 | IPR011009 | - | |
Tpr1g3155 | 610 | Pfam | Wall-associated receptor kinase galacturonan-binding | 20 | 90 | IPR025287 | GO:0030247 | |
Tpr1g3155 | 610 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 10 | 610 | IPR045874 | GO:0004672 | |
Tpr1g3155 | 610 | Pfam | Protein tyrosine and serine/threonine kinase | 302 | 569 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g3155 | 610 | Gene3D | Phosphorylase Kinase; domain 1 | 274 | 374 | - | - | |
Tpr1g3155 | 610 | ProSitePatterns | Protein kinases ATP-binding region signature. | 306 | 328 | IPR017441 | GO:0005524 | |
Tpr1g3155 | 610 | Gene3D | Transferase(Phosphotransferase) domain 1 | 375 | 578 | - | - | |
Tpr1g3155 | 610 | ProSiteProfiles | Protein kinase domain profile. | 300 | 585 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3155 | 610 | PANTHER | RECEPTOR-LIKE KINASE | 10 | 610 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3155 | Tpr-Chr1 | 36044171 | 36046161 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3155 | 23 | 583 | Receptor kinase-like Gene Family | AT1G66910 | 33.116 | 7.16e-92 | 295 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Tpr1g3155 | PK_Tyr_Ser-Thr | 2.7e-43 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3155 | - | - | gmx:100811907 | 840.106 |