Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3154 ATGTCACTCACAATATTAGCACTGCTGCTGCTGCTAATGAACCTTGGAAATGGTCAGATATTGATCAATAACTCATCCATTGAATGCCCCTTCCGTCTATCTTGTTCGCGGTACACGGATTCACGGCACAAGGATCAGATCCTTGAATTTCTCTCACTACCAATATCAGAAAAAATAGTTGTTACATACATAAATTGCGAATCTCAAGAAATAATCCTATCTCACCAACAAAACTGTCTTTCTAGTTTCTTTTTAACACACAATGTTTCTGTATTTTATCCTTTCCGATCAAACTATGGCTTAAGGAACATTACTTTCTTTAACTGCTCTTCGGTTCAACAACACCATCTCAAAAGCTGGGACCAAAGAAACCCCGATGCACAAGACATGTTGTCTTGTCCGATTTATGTTGCAGAATCCACTGAAAGTGTCGTTGAGTTGGACTTATTAAGCTGCACAAGAATGTTTGTTAAAGTTTTACCAATATGGGCATTTGGGATAGGCCAAAATAGTCTCTCATTGAGTTGGTCGAAAACAAATTTTCGCAGTCAATGTTTAGAGCTACACAACAAATCAAAGAAGAACCACACATCCATCATTTTAGAAACAATAGGGGCAATCATTGGTTCGACTGTGCTGGTTGTTTTGATTGGTGTTTTCTTTCGAGTATACTTCTATTTTAGAACGAAAGGGGAAGATCAAACGAGACTTGACAACTTTTTGAAGGATTACGAAGCTTCAAAGCCAACAAGATTCTCTTATGCTGATATTAAGAGAATTACAGACAAATTCAAGGAAAAACTAGGCGAAGGAGCTCATGGAGCTGTCTATAAAGGTAAATTATCGAGTCAAATTCTCGTTGCAGTGAAGATGCTTAATAATACAGAAGGAGATGGGAGAGAGTTCATAAATGAAGTGGGAACTATGGGAAAAATCCACCATGTTAATGTTGTTCGATTGCTTGGCTTTTGCGCTGATGGATTTTATCGTGCTTTGGTTTATGATTTTTTCCCAAATGGTTCGCTGCAGAATTTCATTTCTCCACCCAATAACAAAGATGGTTTCCTTGGTTGGGACTTATTGCAACAAATTGCTCTAGATATTGCTAATGGGATCGAGTATCTTCACCAGGGCTGTGATCATAGAATTCTTCACTTTGATATCAATCCTCATAATGTCTTGTTAGATGACAATTTCATTCCAAAAATCTCAGACTTTGGTTTAGCTAAGTTATGCTCCAAAAATCAAAGTACTGTGTCTATGACTGCAGCTAGGGGAACATTAGGATACATGGCACCTGAAGTTTTTTCTAGAAATTTTGGAAATGTCTCTTACAAGTCTGATATATACAGCTACGGTATGTTACTGCTGGAGATGGTTGGAGGAAGAAAGAATACTAAAACAGTCGTTAATGGTGAGGAAAATTTCGAAGTTTTGTATCCAGATTGGATCCACAGTTTGCTTGAAGGGGGAGACATACATATCCCAATTGACGAAGAGGGTGATTTTAGAATTGCAAAGAAACTAGCAATTGTGGGACTTTGGTGCATTCAGTGGCATTCTGCGCATCGTCCTTCCATGAAAACTGTGATGCAGATGCTACAAGGAGAGGGAGACAAGTTAAAAGTTCCCGACAATCCTTTCAATGCTTCATCTTCAAGTAATAGAACTGCAAATACTGCTACAGGGTATTTTAATTCAGAACTAGATGTGATTCATGAATAA 1725 0.3803 MSLTILALLLLLMNLGNGQILINNSSIECPFRLSCSRYTDSRHKDQILEFLSLPISEKIVVTYINCESQEIILSHQQNCLSSFFLTHNVSVFYPFRSNYGLRNITFFNCSSVQQHHLKSWDQRNPDAQDMLSCPIYVAESTESVVELDLLSCTRMFVKVLPIWAFGIGQNSLSLSWSKTNFRSQCLELHNKSKKNHTSIILETIGAIIGSTVLVVLIGVFFRVYFYFRTKGEDQTRLDNFLKDYEASKPTRFSYADIKRITDKFKEKLGEGAHGAVYKGKLSSQILVAVKMLNNTEGDGREFINEVGTMGKIHHVNVVRLLGFCADGFYRALVYDFFPNGSLQNFISPPNNKDGFLGWDLLQQIALDIANGIEYLHQGCDHRILHFDINPHNVLLDDNFIPKISDFGLAKLCSKNQSTVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTVVNGEENFEVLYPDWIHSLLEGGDIHIPIDEEGDFRIAKKLAIVGLWCIQWHSAHRPSMKTVMQMLQGEGDKLKVPDNPFNASSSSNRTANTATGYFNSELDVIHE* 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3154 574 ProSiteProfiles Protein kinase domain profile. 262 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3154 574 SUPERFAMILY Protein kinase-like (PK-like) 242 534 IPR011009 -
Tpr1g3154 574 ProSitePatterns Protein kinases ATP-binding region signature. 268 290 IPR017441 GO:0005524
Tpr1g3154 574 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 18 574 - -
Tpr1g3154 574 PANTHER RUST RESISTANCE KINASE LR10-RELATED 18 574 IPR045874 GO:0004672
Tpr1g3154 574 Gene3D Phosphorylase Kinase; domain 1 237 336 - -
Tpr1g3154 574 Gene3D Transferase(Phosphotransferase) domain 1 337 550 - -
Tpr1g3154 574 Pfam Protein tyrosine and serine/threonine kinase 264 531 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3154 Tpr-Chr1 36041298 36043661 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3154 182 547 Receptor kinase-like Gene Family AT1G66910 44.474 2.14e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3154 PK_Tyr_Ser-Thr 4.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3154 - - adu:110273083 655.21