Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3147 ATGGATGGATCTTATGAATGTTTTTGTCCGAAGGGGCAATACGGAAATGGAACATTGGCTGGAGGATGTCACAAACGAGATGTAATTACGATGGTTGTCATTGGATCTAGTGGTGGATTAGTTATTCTATTTGTGGGAATTTCGTCTCTATACTTGATATACCAAAAAAGGAAACTCATCAAACTAAAGCAAAAATTCTTCCAACAAAATGGTGGTTTCATTTTGCTACAACAACTCTCTACAAGAGAAGACTCATCTCAATCAGCTCAAATATTCAGAGAAAAGGAACTTAAAAAAGCCACCAACAACTACCACGAAAGTTTAATCATCGGTAGAGGAGGTTTTGGTACAGTTTATAAAGGAGTTTTAACAAACAACAAAATTGTTGCTGTTAAAAAGTCCAAAATATTAGACGAAAATCAAATCGAACAATTCATTAACGAGGTAGTTGTTCTGTCCCAAATAAATCATAGGAATGTTGTCAAACTCTTGGGATGTTGTTTGGAGACAGAAGTTCCTTCCTTGGTGTATGAATTCGTTAGCAACGGTACGCTTTTCGAATTCATACAAAGTTCTAAAGATACAACAAATAATTCAACATGGAAAACACGTTTAAGGATAGCTGCGGAGACAGCTGGAGCGTTATCGTATCTACATTCATCTGCATCAATACCAATTATTCATAGAGATGTTAAAAGTACCAATATTCTCTTGGATGATAATTACACCGCAAAAGTTTCCGATTTTGGAGCTTCGAGATTGATTCCAGTTGATCAAACCGAGATAGCAACAATGGTACAAGGAACTCTTGGATACTTAGATCCAGAGTATATGCAAACACATCATTTAACTGAGAAGAGTGATGTCTATAGCTTTGGCGTTGTTCTTGCAGAACTTCTAACAGGGGAAAAGCCTATTTCTTTTAATAGGTCAGAAGAGAAAACTAGTCTTGCTATGCATTTTTTGTCTTGTTTAAAACGAGACCGAATTTTTGAAGCTATTCAAGTTGGTATTATGAATGATGAAAACAAGGAAGAGATTAAGGAAGTTGCTATTCTTGCGGCAAGGTGTTTGAGTCTTAGAGGTGAGGAAAGACCTAGTATGAAGGAAGTGGCAATGGAGTTAGATAGTATAAGGTTAATGGAGAAGCATCCATGGAATGGTACAGAGCAAAATTTGGAGAGTCAACGCTTACTTCAAGAGGCATCCTCAAGCATTTATAATGAGATTGGTGATAATAGATATAATCTTGGATATACTACTCGATATGATAGTTTGAAAGATCAACCATTAATTTCCTTGGATGATGGAAGGTTGCTTATAACATTGAAGTCCATAAAATTTAAACATTGCACGGTTTCAGACAAAAACAATTTTGCCACTATGTGGGTGAGAGTGATATTGTTGGTCTTGTTACCATTTATGCTCCAACAAAGTAGCAGCACCAATCTTTCTATTGAACAAAAGCATTCCTGTCCTCCTTCATCTTGTGGCAAAATTTTCAACATAACTTATCCATTTCGATTAAAAGATGACCCAATTCATTGCGGTGACAGCAGGTATGAACTATCATGTGAAAATAATGTGACAACTTTATATTTATATTCTGCAAAATATCATGTCCAGTCCATCAATTACAACAACTTCACAATCAGACTGGTTGATCCAGGAGTTCAAGAATCTAATTGCTCTTCATTTCCTCGCAATTTCTTGTCTCGATCTAATTTCTGTGATACTTATGAAGCCATTAACAACGAAGATTGCACAGTTCCATACATAGCCAGCAACCGAGATTCTTATGATTTGACTATTTTTAAGCATATAGTATATTTAAATTGTAGTCGTCTCGTGACTAACAATTCTAAATATGTGAACACGTCTTCTTGTCTCAATTCGAACTCTAAAAGCAATTATATTTATGCTATCGCGGGTGATTTAATTGCGAAAGACTTTCAAGTTGGTTGCCATGTGAAGTTTGTTGCTCCAACTTCTTGGCCAGGTTTGCAAAGAAATCAAGAACATTCCTATGAAGAAATGCACAAGGCGTTAGTATATGGATTTGAGATTTCATGGTTAGGTTTAATCTGCCAAAATCGTTGCGGAGAAACAATGCTCTGCTCCTTCAACTCTTCAACCGAGATAGTTGAATGCTCTCATCGTCTCTGCCTTACTGTGATGGGATATTGGACCGATACTAGTTGTGGAAGATGGACTCAGTTTTTGTCATATGCTAAAGATAATATCATCGCTATCATGATAGGACTGGTTGAAATAATAAAAGGACCAAACTCAAATTATGATCTAATCAACTATAAAGTAGGATTGACTATAGGACACTATGTTCTACCATCATTATGGGCTGGTAGATTTCTGCTTGGGATAACATTTTTTATTGTACTACTGATATATAAATGGCGAAAAAGACATTGGTCAATGTATGAATGTATTGAAATATATCTACAACAACAAAACAACCTCATGCCCATTGGATATTCATACAAACAAATTAAGAAAATGGCTAGAGGTTTCAAAGACAAGTTGGGAGAAGGAGGCTTTGGCACTGTGTTCAAGGGGAACCTTCGCAGCGGTCCTTGTGTGGCAATAAAGATGTTGGGTAAGTCAAAAGGTCATGGACAAGATTTTGTTAGTGAAGTCGCAACTATTGGAAGAATACATCATTTGAATGTGTTTAAATTACTTGGATTTTGTATTGAGGGATCAAAGCGCGCTCTTATTTATGAATACATGCCCAATGGGTCTCTGGACAAATTTATTTTCGCTAAAGAAGGGAGTATAAATTTAAGCTACAAACAAATTTCTGATATTTCAATTGGAATAGCTCGTGGGATAGCTTATCTTCACCATGGATGCGAAATGAAGATTTTGCATTTTGATATCAAGCCTCACAATATCCTTCTTGATGAGAATTTTATCCCAAAAATATCTGACTTTGGGTTGGCCAAGCTACATTCGATAGACAATAGCATTGTCACAATGACGGGAATAAGAGGCACAATTGGATATATGGCTCCAGAATTGGTCTACAAAAATATTGGGGGAGTGTCATATAAGGCTGATGTTTATAGCTTTGGGATGCTTTTAATGGAGATGGCAAGCAAGAGGAAAAACCTAAATTCCAATGCAGAACATTCAAGCCAGATGTATTTTCCCTTTTGGATTTATGATCAACTTAGAAATGAGGAAGAAATCGAAATGGGAGATGTCACGGAGGAGGATATGAAAATTGTAAGGAAGATGATCATGGTTGCTCTTTGGTGTATACAATTGAAGCCGAATGATCGCCCCTCAATGAGTAAAGTAGTGGAGATGCTTGAAGGAGATATTGAAAGCATTGAAATGCCTCCAGGGCCAACCATGTATCCAGATGAAACAATTTCAAGAGACGAAACAATCAACTCAGACCAACCAATGTCAAGTGACTTAAATAGTTTTAGTGATTCTATGGAAAATGCAACTAATAATACTTCTTGA 3492 0.364 MDGSYECFCPKGQYGNGTLAGGCHKRDVITMVVIGSSGGLVILFVGISSLYLIYQKRKLIKLKQKFFQQNGGFILLQQLSTREDSSQSAQIFREKELKKATNNYHESLIIGRGGFGTVYKGVLTNNKIVAVKKSKILDENQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFEFIQSSKDTTNNSTWKTRLRIAAETAGALSYLHSSASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLIPVDQTEIATMVQGTLGYLDPEYMQTHHLTEKSDVYSFGVVLAELLTGEKPISFNRSEEKTSLAMHFLSCLKRDRIFEAIQVGIMNDENKEEIKEVAILAARCLSLRGEERPSMKEVAMELDSIRLMEKHPWNGTEQNLESQRLLQEASSSIYNEIGDNRYNLGYTTRYDSLKDQPLISLDDGRLLITLKSIKFKHCTVSDKNNFATMWVRVILLVLLPFMLQQSSSTNLSIEQKHSCPPSSCGKIFNITYPFRLKDDPIHCGDSRYELSCENNVTTLYLYSAKYHVQSINYNNFTIRLVDPGVQESNCSSFPRNFLSRSNFCDTYEAINNEDCTVPYIASNRDSYDLTIFKHIVYLNCSRLVTNNSKYVNTSSCLNSNSKSNYIYAIAGDLIAKDFQVGCHVKFVAPTSWPGLQRNQEHSYEEMHKALVYGFEISWLGLICQNRCGETMLCSFNSSTEIVECSHRLCLTVMGYWTDTSCGRWTQFLSYAKDNIIAIMIGLVEIIKGPNSNYDLINYKVGLTIGHYVLPSLWAGRFLLGITFFIVLLIYKWRKRHWSMYECIEIYLQQQNNLMPIGYSYKQIKKMARGFKDKLGEGGFGTVFKGNLRSGPCVAIKMLGKSKGHGQDFVSEVATIGRIHHLNVFKLLGFCIEGSKRALIYEYMPNGSLDKFIFAKEGSINLSYKQISDISIGIARGIAYLHHGCEMKILHFDIKPHNILLDENFIPKISDFGLAKLHSIDNSIVTMTGIRGTIGYMAPELVYKNIGGVSYKADVYSFGMLLMEMASKRKNLNSNAEHSSQMYFPFWIYDQLRNEEEIEMGDVTEEDMKIVRKMIMVALWCIQLKPNDRPSMSKVVEMLEGDIESIEMPPGPTMYPDETISRDETINSDQPMSSDLNSFSDSMENATNNTS* 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3147 1163 ProSiteProfiles Protein kinase domain profile. 104 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3147 1163 SUPERFAMILY Protein kinase-like (PK-like) 85 374 IPR011009 -
Tpr1g3147 1163 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 469 1141 - -
Tpr1g3147 1163 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 92 376 - -
Tpr1g3147 1163 Gene3D Phosphorylase Kinase; domain 1 819 915 - -
Tpr1g3147 1163 Pfam Wall-associated receptor kinase galacturonan-binding 492 555 IPR025287 GO:0030247
Tpr1g3147 1163 Gene3D Phosphorylase Kinase; domain 1 74 179 - -
Tpr1g3147 1163 MobiDBLite consensus disorder prediction 1137 1163 - -
Tpr1g3147 1163 Gene3D Transferase(Phosphotransferase) domain 1 180 402 - -
Tpr1g3147 1163 Gene3D Transferase(Phosphotransferase) domain 1 916 1120 - -
Tpr1g3147 1163 CDD STKc_IRAK 110 378 - -
Tpr1g3147 1163 PANTHER RUST RESISTANCE KINASE LR10-RELATED 469 1141 IPR045874 GO:0004672
Tpr1g3147 1163 PANTHER RUST RESISTANCE KINASE LR10-RELATED 92 376 IPR045874 GO:0004672
Tpr1g3147 1163 Pfam Protein kinase domain 104 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3147 1163 SMART serkin_6 841 1111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3147 1163 SMART serkin_6 104 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3147 1163 Pfam Protein tyrosine and serine/threonine kinase 843 1111 IPR001245 GO:0004672|GO:0006468
Tpr1g3147 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Tpr1g3147 1163 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Tpr1g3147 1163 ProSitePatterns Protein kinases ATP-binding region signature. 847 869 IPR017441 GO:0005524
Tpr1g3147 1163 MobiDBLite consensus disorder prediction 1121 1163 - -
Tpr1g3147 1163 ProSiteProfiles Protein kinase domain profile. 841 1115 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3147 1163 ProSitePatterns Serine/Threonine protein kinases active-site signature. 961 973 IPR008271 GO:0004672|GO:0006468
Tpr1g3147 1163 SUPERFAMILY Protein kinase-like (PK-like) 824 1112 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3147 Tpr-Chr1 35984500 35994099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3147 3 438 Receptor kinase-like Gene Family AT1G21230 51.242 2.45e-132 419
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3147 PK_Tyr_Ser-Thr 3.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3147 - - gmx:100305367 889.412