Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3146 ATGAAACAGAACACAAAGCTCACACAACTATGCCAAATTTTAATGGTAACAATATCAATATCCATGGTAACAATAGTATTTGCATCGGATGAATCCTTTTCAACATCCCTACCCGGTTGCAAAAACAAATGTGGAAATGTCACAATTCCATTTCCTTTTGGAATATCAGATTCATCAATACCAAATCAAGGAACTTGTTTCCTAACGCCAAAATTTAACCTCACATGTGTAAATGACACAAAATTATTTTGGGGTGAGTCACAAGTTAACAACATAAGCATCCTCGAAGGACAAATGGAAGTATTGTTTTATATCTCCAGGTTTTGTTATGACGGAAGTAACACACCCAGTTTAGACACCGGCAGTTTCAGAATATCCAACATGAAAAACAAGTTCGTAACGGTTGGTTGTGACACTTACGGTTATCTCAACAGCATTTTCAGCGGAGAAACATACTCGACCGGTTGTTTAACAAGATGTTATGGTAATCTAGATGGAATTGAAAACGGAACATGTTCAGGTATTGGTTGTTGTCAAGTTGATATTCCACGTATGATGAAGAATATAAGTATAGAAGTTTCTGAATTTCCTAATTCAACGGAGGAATATAGTGGGTGTAGCTATTCTTTTATTGTTAAAGATGGTTTCTATAATTTTTCTCTTGCTGATTTGTATAATTTTACTTCTGAGGAGGTTCCATTGATTCTTGATTGGAGTGTTGGATGGGAAAATTGTACGGTTTCAAAGGCTTGCATGAATAATAGTAATTGCCATGATGAGGATATTGATTTTGGTGGTTACCGGTGTGAATGTAAGGAAGGTTATACAGGAAACCCTTATCACCCAGATGGCTGCAAAGACATCGATGAATGTAAGACAAATAACCACACATGCATAAGTGAAGAACATTGTCGCAACACGGATGGGCATCACGAGTGTTTTTGTCCGGATGGACAATCCGGTAATGGAACAAAGACAGGAGCTGGGTGCAGTAAAAGAGATTTAATTACGAAGGTTGCCATCGGATTAAGTGCTGGACTCATTGTTCTATTTGTGGCGATTTCATCTCTTTACTTGACATATCAAAAAAGGAAACTGATCAAACTAAAGCAAAAATTCTTCCAACAAAACGGTGGTTCCATTTTGCTACAACAACTATCTACAAGAGAAGAGACATCGCAATCGGCTCAAATATTCACAGAAGAGGAACTTAAAAAAGCCACAAAAAACTACGATGAAAGCTTAATCATTGGTAGAGGAGGTTTTGGCACTGTCTTCAAAGGGATTTTACCCGATAACAAAATTGTCGCTGTCAAAAAATCCAAAGTAATTGACACAAATCAAATTGAGCAATTCATTAACGAAGTAGTTGTTCTGTCTCAAATAAATCATAGGAATGTTGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTCCTTGGTTTATGAATTCGTTAGCAACGGTACACTTTTCGACTTCATACATACTAAAGATAAAGCAAATAATCCAACATGGAAAACACGTTTAAGGATAGCAGCAGAAACAGCTGGAGCTTTATCTTATCTACATTCGGCTGCTTCAATACCAATTATTCATCGAGATGTTAAGAGTACCAACATTCTCTTAGATGACAACTACACCGCAAAAGTTTCCGATTTCGGAGCTTCGAGATTGGTTCCACTTGATCAAACTGAGATAGCAACAATGGTTCAAGGTACTCTTGGATATTTAGATCCAGAGTATATGCAAACACATCAATTAACTGAGAAAAGTGATGTTTATAGCTTTGGCGTTGTTCTTGCGGAGCTTTTAACAGGAGACAAACCTCTTTCTTTTAATAGGTCTGAAGAGAACACTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAAGAAGATCGAATTTTCGAAGCTATTCAAGTTGGTATTTTGAATGATGAAAACAAGAAAGAGATTAAGGAGGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAGGTGATGAAAGACCAAGCATGAAAGAAGTGGCTATGGAGTTGGAAGGTATAAGGTTAATTGAGAGGCATCCTTGGAATGAGACAGAGCAAAATTTTGAAGAGGGTCAACGCTTACTTCATGAGGCATTTTCTAGCATTTATAATGAAAATGGTGATGATAGCTATAATGTTGGATATACTACTGGTTATGATAGCTTGAGAGATCAACCATTGATTCAACAAAACACAATGAAACAGAACACAAAGCTCACACAACTATGCCAAATTTTAATGGTAACAATATCAATATCCATGGTAACAATAGTATTTGCATCGGATGAATCCTTTTCAACATCCCTACCCGGTTGCAAAAACAAATGTGGAAATGTCACAATTCCATTTCCTTTTGGAATATCAGATTCATCAATACCAAATCAAGGAACTTGTTTCCTAACGCCAAAATTTAACCTCACATGTGTAAATGACACAAAATTATTTTGGGGTGAGTCACAAGTTAACAACATAAGCATCCTCGAAGGACAAATGGAAGTATTGTTTTATATCTCCAGGTTTTGTTATGACGGAAGTAACACACCCAGTTTAGACACCGGCAGTTTCAGAATATCCAACATGAAAAACAAGTTCGTAACGGTTGGTTGTGACACTTACGGTTATCTCAACAGCATTTTCAGCGGAGAAACATACTCGACCGGTTGTTTAACAAGATGTTATGGTAATCTAGATGGAATTGAAAACGGAACATGTTCAGGTATTGGTTGTTGTCAAGTTGATATTCCACGTATGATGAAGAATATAAGTATAGAAGTTTCTGAATTTCCTAATTCAACGGAGGAATATAGTGGGTGTAGCTATTCTTTTATTGTTAAAGATGGTTTCTATAATTTTTCTCTTGCTGATTTGTATAATTTTACTTCTGAGGAGGTTCCATTGATTCTTGATTGGAGTGTTGGATGGGAAAATTGTACGGTTTCAAAGGCTTGCATGAATAATAGTAATTGCCATGATGAGGATATTGATTTTGGTGGTTACCGGTGTGAATGTAAGGAAGGTTATACAGGAAACCCTTATCACCCAGATGGCTGCAAAGACATCGATGAATGTAAGACAAATAACCACACATGCATAAGTGAAGAACATTGTCGCAACACGGATGGGCATCACGAGTGTTTTTGTCCGGATGGACAATCCGGTAATGGAACAAAGACAGGAGCTGGGTGCAGTAAAAGAGATTTAATTACGAAGGTTGCCATCGGATTAAGTGCTGGACTCATTGTTCTATTTGTGGCGATTTCATCTCTTTACTTGACATATCAAAAAAGGAAACTGATCAAACTAAAGCAAAAATTCTTCCAACAAAACGGTGGTTCCATTTTGCTACAACAACTATCTACAAGAGAAGAGACATCGCAATCGGCTCAAATATTCACAGAAGAGGAACTTAAAAAAGCCACAAAAAACTACGATGAAAGCTTAATCATTGGTAGAGGAGGTTTTGGCACTGTCTTCAAAGGGATTTTACCCGATAACAAAATTGTCGCTGTCAAAAAATCCAAAGTAATTGACACAAATCAAATTGAGCAATTCATTAACGAAGTAGTTGTTCTGTCTCAAATAAATCATAGGAATGTTGTCAAACTCTTAGGATGTTGTTTAGAGACAGAAGTTCCTTCCTTGGTTTATGAATTCGTTAGCAACGGTACACTTTTCGACTTCATACAAACTACTAAAGACAAACCAAATAATCCAACATGGAAAACACGTTTAAGAATAGCAGCAGAGACAGCTGGAGCTTTATCGTATCTACATTCGGCTGCTTCAATACCAATTATTCATCGAGATGTTAAGAGTACCAACATTCTCTTGGATGATAATTACACTGCAAAAGTTTCTGATTTTGGAGCTTCAAGATTAGTTCCACTTGATCAAACCGAAATAGCAACAGTGGTTCAAGGAACTCTTGGATACTTAGATCCGGAGTATATGCAAACACATCAGTTAACCGAGAAAAGTGATGTTTATAGCTTTGGTGTAGTTCTTGCAGAGCTTTTAACAGGGGACAAACCTCTCTCTTTTAATAGGCCGGAAGAGAGCATTAGTCTTGCTATGCACTTTTTGTCTTGTTTAAAACAAGATAAAATATTTGAAGCTATTCAAGTTGGAATTTTGAGTGATGATAACAAGAAGGACATTAAGGAGGTTGCTATTCTTGCAGCAAGGTGTTTGAGACTTAGAAGTGATGAAAGACCTACAATGAAGGAAGTGGCTATGGAGTTGGATGGTATAAGATTAACGGAGAGGCATCCTTGGAATGATACAGACCAAAATTTTGAGGAGAATCAACGCTTACTTCATGAGGCATCTTCTAGCATTTATAGTGAAATTGGTGATCATAGCTCTAATTTTGGATATACTAATGTGTATGATAGCTTGAAAGATCAACCATTAATTGCCTTGGATGATGGAAGATGA 4470 0.3682 MKQNTKLTQLCQILMVTISISMVTIVFASDESFSTSLPGCKNKCGNVTIPFPFGISDSSIPNQGTCFLTPKFNLTCVNDTKLFWGESQVNNISILEGQMEVLFYISRFCYDGSNTPSLDTGSFRISNMKNKFVTVGCDTYGYLNSIFSGETYSTGCLTRCYGNLDGIENGTCSGIGCCQVDIPRMMKNISIEVSEFPNSTEEYSGCSYSFIVKDGFYNFSLADLYNFTSEEVPLILDWSVGWENCTVSKACMNNSNCHDEDIDFGGYRCECKEGYTGNPYHPDGCKDIDECKTNNHTCISEEHCRNTDGHHECFCPDGQSGNGTKTGAGCSKRDLITKVAIGLSAGLIVLFVAISSLYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTREETSQSAQIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPDNKIVAVKKSKVIDTNQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIHTKDKANNPTWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATMVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRSEENTSLAMHFLSCLKEDRIFEAIQVGILNDENKKEIKEVAILAARCLRLRGDERPSMKEVAMELEGIRLIERHPWNETEQNFEEGQRLLHEAFSSIYNENGDDSYNVGYTTGYDSLRDQPLIQQNTMKQNTKLTQLCQILMVTISISMVTIVFASDESFSTSLPGCKNKCGNVTIPFPFGISDSSIPNQGTCFLTPKFNLTCVNDTKLFWGESQVNNISILEGQMEVLFYISRFCYDGSNTPSLDTGSFRISNMKNKFVTVGCDTYGYLNSIFSGETYSTGCLTRCYGNLDGIENGTCSGIGCCQVDIPRMMKNISIEVSEFPNSTEEYSGCSYSFIVKDGFYNFSLADLYNFTSEEVPLILDWSVGWENCTVSKACMNNSNCHDEDIDFGGYRCECKEGYTGNPYHPDGCKDIDECKTNNHTCISEEHCRNTDGHHECFCPDGQSGNGTKTGAGCSKRDLITKVAIGLSAGLIVLFVAISSLYLTYQKRKLIKLKQKFFQQNGGSILLQQLSTREETSQSAQIFTEEELKKATKNYDESLIIGRGGFGTVFKGILPDNKIVAVKKSKVIDTNQIEQFINEVVVLSQINHRNVVKLLGCCLETEVPSLVYEFVSNGTLFDFIQTTKDKPNNPTWKTRLRIAAETAGALSYLHSAASIPIIHRDVKSTNILLDDNYTAKVSDFGASRLVPLDQTEIATVVQGTLGYLDPEYMQTHQLTEKSDVYSFGVVLAELLTGDKPLSFNRPEESISLAMHFLSCLKQDKIFEAIQVGILSDDNKKDIKEVAILAARCLRLRSDERPTMKEVAMELDGIRLTERHPWNDTDQNFEENQRLLHEASSSIYSEIGDHSSNFGYTNVYDSLKDQPLIALDDGR* 1490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3146 1489 ProSiteProfiles EGF-like domain profile. 287 325 IPR000742 -
Tpr1g3146 1489 ProSiteProfiles EGF-like domain profile. 984 1029 IPR000742 -
Tpr1g3146 1489 Pfam Calcium-binding EGF domain 1030 1065 IPR001881 GO:0005509
Tpr1g3146 1489 Pfam Calcium-binding EGF domain 287 322 IPR001881 GO:0005509
Tpr1g3146 1489 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Tpr1g3146 1489 Pfam Wall-associated receptor kinase galacturonan-binding 40 98 IPR025287 GO:0030247
Tpr1g3146 1489 Pfam Wall-associated receptor kinase galacturonan-binding 783 841 IPR025287 GO:0030247
Tpr1g3146 1489 Gene3D Phosphorylase Kinase; domain 1 377 486 - -
Tpr1g3146 1489 Gene3D Phosphorylase Kinase; domain 1 1120 1229 - -
Tpr1g3146 1489 ProSiteProfiles EGF-like domain profile. 241 286 IPR000742 -
Tpr1g3146 1489 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 711 IPR045274 GO:0007166
Tpr1g3146 1489 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 757 1455 IPR045274 GO:0007166
Tpr1g3146 1489 Gene3D Laminin 291 328 - -
Tpr1g3146 1489 Gene3D Laminin 1034 1071 - -
Tpr1g3146 1489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 532 544 IPR008271 GO:0004672|GO:0006468
Tpr1g3146 1489 ProSiteProfiles Protein kinase domain profile. 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 Pfam Protein kinase domain 413 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 Pfam Protein kinase domain 1156 1421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 Gene3D Laminin 985 1033 - -
Tpr1g3146 1489 Gene3D Laminin 242 290 - -
Tpr1g3146 1489 Gene3D Transferase(Phosphotransferase) domain 1 487 705 - -
Tpr1g3146 1489 Gene3D Transferase(Phosphotransferase) domain 1 1230 1452 - -
Tpr1g3146 1489 CDD STKc_IRAK 1160 1428 - -
Tpr1g3146 1489 SMART egf_5 1033 1074 IPR000742 -
Tpr1g3146 1489 SMART egf_5 244 286 IPR000742 -
Tpr1g3146 1489 SMART egf_5 290 331 IPR000742 -
Tpr1g3146 1489 SMART egf_5 987 1029 IPR000742 -
Tpr1g3146 1489 Pfam Wall-associated kinase 913 1015 IPR013695 GO:0004674|GO:0016021
Tpr1g3146 1489 Pfam Wall-associated kinase 170 272 IPR013695 GO:0004674|GO:0016021
Tpr1g3146 1489 SMART egfca_6 988 1029 IPR001881 GO:0005509
Tpr1g3146 1489 SMART egfca_6 287 331 IPR001881 GO:0005509
Tpr1g3146 1489 SMART egfca_6 1030 1074 IPR001881 GO:0005509
Tpr1g3146 1489 SMART egfca_6 245 286 IPR001881 GO:0005509
Tpr1g3146 1489 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1276 1288 IPR008271 GO:0004672|GO:0006468
Tpr1g3146 1489 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 21 711 - -
Tpr1g3146 1489 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 757 1455 - -
Tpr1g3146 1489 SUPERFAMILY EGF/Laminin 285 322 - -
Tpr1g3146 1489 ProSiteProfiles Protein kinase domain profile. 1154 1437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 SUPERFAMILY EGF/Laminin 1028 1065 - -
Tpr1g3146 1489 ProSiteProfiles EGF-like domain profile. 1030 1068 IPR000742 -
Tpr1g3146 1489 SMART serkin_6 411 693 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 SMART serkin_6 1154 1437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3146 1489 SUPERFAMILY Protein kinase-like (PK-like) 389 682 IPR011009 -
Tpr1g3146 1489 ProSitePatterns Protein kinases ATP-binding region signature. 1160 1183 IPR017441 GO:0005524
Tpr1g3146 1489 CDD STKc_IRAK 417 684 - -
Tpr1g3146 1489 SUPERFAMILY Protein kinase-like (PK-like) 1132 1425 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3146 Tpr-Chr1 35965663 35982854 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3146 40 735 Receptor kinase-like Gene Family AT1G21230 46.335 0.0 597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Tpr1g3146 Pkinase 9.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3146 - - gsj:114381577 1779.99