Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3142 ATGTCACTGTTCACAATAATCCTTGCACTGCTGCTGTTAGTGAACCTTGAAAATGGTCTGAGTGATGCTTCCATTGAATGTCCTTTCAAGCTTAACTGTACACATAACAAGAAGTTTCTTGAACTTCCTGCTCATCCAGTCCCTGTCAACCTCATAATCACTCACATTGATTATATATACCGATTGTTGTATCTATCAGATCCCGGAAATTGTTTACCGAAACTCATCCTTGATCACAACTTTTCATCAATATTTCCGTTGAAGAACAGTTTTGAAGGAAATATTAGTTTCTTCAATTGTTCTTCAGTAGTACAACTCAGAACAACCGATTATGTGAACCAGGGTGGGCTAGATATCAAATCTTGTCCAATTTATGTTGCTGATTCAGATTACGAAAGTATAGTTGAATCTGATCTTGTATACTGCATTAAAATGTTTGACCGCGAATCTTCATTCTACAAACAATCTGCACAGAGTATTCAAAACAACCTACTCTCATTTACATGGGAAGGAACAAATTTTGACATACGATGCTTGAAATGTGAACACAAATCAAAGAAGAAGATTACATTCATTATTTTATCCTCTGCAGGTGTAATCATCGGTTCAACTCTGTTAGTGTTTGTCCTCGGTGCTATTGTTCGAATTCATCTCCATTTCAAGATGAAAGGCGAAGATCATACAAGAATCGAAAACTTTTTAAAGGATTACAAGGCTTTAAAACCAACCAGATTCTCCTATGCTGACATAAAGAGAATCACAAATAAATTTAAGGATAAGTTAGGCGAAGGAGCTCACGGAGCTGTATACAAAGGTAAATTATCGAGCCAAATTTTGGTTGCTGTTAAGATGCTGAATAACGCAGAGGGAGATGGGAAAGAGTTCATAAATGAAGTGGGAACTATGGGGAAAATCCACCATCTCAATGTTGTCCGCTTACTTGGCTATTGTGCAGATGGATTTCACCGTGCTCTAGTTTATGACTTTTTCCCAAATGGTTCGTTGCAGAAATTCATTTCTCCTCCTAGCAACAAAGATAGTTTCCTTGGATGGGACAAGTTGCAGCAAATTGCTTTAGGCATAGCCAGTGGAATTGAATATCTTCATCAGGGTTGTGATGAAAGAATTCTTCACTTTGACATCAATCCTCATAATGTCTTGATAGATGACAGTTTCATCCCAAAAATTACAGACTTCGGTTTGGCTAAGATATGCTCAAAAAATCAAAGTATTGTATCTATGACAGCAGCCAGAGGAACATTAGGATACATGGCACCCGAAGTCTTTTCTAGAAACTTCGGAAATGTCTCTTATAAGTCTGATATATATAGCTATGGTATGTTGTTGTTAGAGATTGTTGGCGGAAGAAAGAATACAAACACAACCACAAATGAAGATAACTTTCAAGTTTTGTATCCTGATTGGATCCATAGTCTGCTTGAAGGAGGAGACATACAAATCCCAATAGATGAAGAGGGAGATTTTAGAATTGCGAAAAAATTGGCAATCGTTGGACTTTGGTGCATTCAATGGCAACCTATGCACCGTCCGTCTATGAAAACTGTGATGCAAATGTTGCAAGGAGATGAAGACAAGTTAAAAGTTCCCTCCAACCCTTTTGGACCTACAACTTCAGCTAATACAACTACTAATGTTGTTGCAAAACGTATAAACTTGGAGCTTGAAGTGATTGAAGAAATAGATTAG 1707 0.3738 MSLFTIILALLLLVNLENGLSDASIECPFKLNCTHNKKFLELPAHPVPVNLIITHIDYIYRLLYLSDPGNCLPKLILDHNFSSIFPLKNSFEGNISFFNCSSVVQLRTTDYVNQGGLDIKSCPIYVADSDYESIVESDLVYCIKMFDRESSFYKQSAQSIQNNLLSFTWEGTNFDIRCLKCEHKSKKKITFIILSSAGVIIGSTLLVFVLGAIVRIHLHFKMKGEDHTRIENFLKDYKALKPTRFSYADIKRITNKFKDKLGEGAHGAVYKGKLSSQILVAVKMLNNAEGDGKEFINEVGTMGKIHHLNVVRLLGYCADGFHRALVYDFFPNGSLQKFISPPSNKDSFLGWDKLQQIALGIASGIEYLHQGCDERILHFDINPHNVLIDDSFIPKITDFGLAKICSKNQSIVSMTAARGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEIVGGRKNTNTTTNEDNFQVLYPDWIHSLLEGGDIQIPIDEEGDFRIAKKLAIVGLWCIQWQPMHRPSMKTVMQMLQGDEDKLKVPSNPFGPTTSANTTTNVVAKRINLELEVIEEID* 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3142 568 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 15 568 - -
Tpr1g3142 568 SUPERFAMILY Protein kinase-like (PK-like) 238 526 IPR011009 -
Tpr1g3142 568 ProSitePatterns Protein kinases ATP-binding region signature. 261 283 IPR017441 GO:0005524
Tpr1g3142 568 Pfam Protein kinase domain 258 524 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3142 568 Gene3D Phosphorylase Kinase; domain 1 230 329 - -
Tpr1g3142 568 ProSiteProfiles Protein kinase domain profile. 255 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3142 568 PANTHER RUST RESISTANCE KINASE LR10-RELATED 15 568 IPR045874 GO:0004672
Tpr1g3142 568 Gene3D Transferase(Phosphotransferase) domain 1 330 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3142 Tpr-Chr1 35926999 35929620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3142 193 539 Receptor kinase-like Gene Family AT1G66910 46.218 1.55e-104 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3142 Pkinase 6.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3142 - - adu:110273083 646.736