Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3141 ATGAGCAGAGGAATGGAATCATTCTTATGGTTCCTCCAAATTGTTATGGTTGTTGTTTTGATACTACTGCATCATACTCATCAAACATGTGATGCAATTAATAATAACCAAATATATTGTCCACCTTCTTCATGTGGCAAAATCACAAACATAAAACATCCGTTTCGGCTTAAGAATGATCCAACGTCATGTGGTGATCCGAGGTACGAGTTATCCTGCGAAAACAACATGACAGTGCTACCTTTGTTTTCGGGTAAATACTATGTGAAGTCAATTGATTACAAATTTTACACAATTCGGTTAGTTGATCCCGGAATTCAAGAGGGTAATTGCTCTTCCGTTCCTCGATATTTCTTAACCACATCCAATTTCACAAGTTCTTACAATTATAGCTATCGCGGGGATCCATACGAAGTTGGTTCCCCGCCTTGGGTGGGGCATGTACTATACTTGAACTGTAGCAAGCCAGTGAAGAACGATCCTATGTATGTCGATACATCTCCATGCATCAAATGGAATTCCAAAGGCCATGTTTATGCTATCGCGAATGATTTCAACACTGGAAGATTAAATGTTGGTTGTCAGGTGAAACTTGTCGCTACGTCTTCAGATTCTTCTTTGTTTAAGAATTTTGTAAACAACATTTCACAACCTTTTTCTTATGCTGAAATTCATGGAATTCTAAACTATGGATTTGATCTTACTTGGGTGAGACGTGCCTGTGAAGATTTTTTTGACACTAACCTACAGAACTGTCAGTTCAATGGAGAAATTGGAGGGCTTGAATGTGAACTTGATTATTGCAGAACTCCGTTAGGAAAGTTCGTCAATTGTGAACATTTGTCAAAGGTGCGCATATTCATGGAAGATATTATACTGGGCATTGTTAAAGGATTGCTACAAATAAAGGGCACGACAAAAAGTTCCGAATTAACCCATGGAACCATTGGATTACCTAAGAAAATGTCTGATTCTAAAGTTGGCATCGAATTAGGAAGAGTCACAGGGAGATATATCTTGCCACCATTTATAGTGAGATTTACATTGGGCCTCATGGTTTTCTTTGTGCTATTGGTATATACATGTCGAAGAAGACACATCTCAATTTATGAAAATATTGAAGTTTTTCTTCGTGGTAGTACCTTGATGCCAATAAGGTATTCATACAAAGATATAAAGAAGATGACCGGAAATTTCAAGGACAAGGTGGGCGAAGGAGGTTTTGGTTCTGTTTATAGAGGAAGGTTAAGTAGTGGGCCATTTGTTGCGGTAAAGATGTTGGGTAAACTTAAAGGTAACGGACAAGATTTCATTAGTGAAGTCGCGACCATAGGAAGAATACACCATGCCAATGTGGTGAGACTTATTGGATTTTGTTTTGAGAGATCAAAACGTGCACTTGTTTATGAATTCATGTCGAACGGATCTCTAGATAAATATATTTCCTCTAAAGAGGATGCTATTTTCCTAACTTCTAAGAAAATGTATGAGATATCTCTTGGCGTGGCTCGTGGAATTGCTTATTTGCATCAAGGTTGTGATATGCAAATATTGCATTTTGATATCAAACCCCATAACATCCTTCTTGATGAGAACTTTATCCCCAAAGTTTCAGACTTTGGTCTTGCAAAACTTTATCCTAATGACAATAGTATTGTCACTTTAACAGCAGCACGAGGAACAATTGGTTACATGGCTCCTGAATTGTTCTACAAAAATATTGGAGGAGTGTCCTATAAAGCCGATGTGTATAGCTTCGGAATGCTTTTGATGGAAATGGCAAACAAGAGAAGAAATTTAAATCCAAATGCAGATCGTTCAAGCCAACTTTTCTTTCCTTTTTGGATTTATAATCAATTGATTGAAGAAAGGGAGATACAAATGGATGAAATTTCTGAAGAAGAAAAGAATAATGTAAAGAAAATGTTTATAATTGCATTATGGTGTATACAGTTAAAACCAAGTGATCGTCCTGCAATGAACAAAGTAATAGAGATGCTTGAAGGAAATATTGAGGTGATTGAAATGCCTTCAAAACCTTCTTTCTATCCCAATGAAATTATTGAGGATATTGAATCAGAAACTGATACTGACTCTGACTCTATTAGTTTTATTGTGGAATGTACATCAAAGCCTCTATTGATGAATTCTTATACTTTGATATTATTGGTGTGTATGTTATGTTCCATTTCAGCATCAGTACTCATGAGAAGAAGGATGGAATCATTTCTATGCTTCCTTCAAGTGATGTTTGTTGTACTAATACTGCATCATTATCATCATCAAGTATGTGATGCAACTATTACTAGTAAAAACCAAACATATTGTTCACCTTCTTCATGCGGCAAAATCACAAACATAAAACATCCCTTTCGACTTAAGAATGACCCAACAGCCTGCGGTGATCCAAGGTATGAGTTATCCTGCGAAAACAACATGACGGTGTTAACTCTGTTTTCGGGGAAATACTACGTGAAATCAATCAACTACAAATACTATACAATTCGAGTAGTTGATCCCGGAATTGAAGACAGGGATTGCTCCTCCATTCCTCGGTATTTCATAACTACATCCAATTTCACAAGTTATTACAATTATCAGTACCACGGGGATCTGTACGAAGCCCGCAGTCAATCCAGTTGGCTGGGGCACATAATTTACTTGAACTGTAGTAAACCAGTAAAGAAGGATCCCATGTATGTCGATATATCTTCTTGTGTTAAATGTAATTCCGAAGGCCATGTTTATGCGATCGCCGGCAACATCAAGACTGGGAGATTAAATGTTGATTGTCAGGTTAAGCTTGTTGCTATGTCATCAGCTCCTGCTTTAAAGGCTCATATAAGCACTGGACAAAGTTATTCTTCCTATATGGAAATTCATGAAATGCTAAGCTATGGATTTTACATTTCGTGGACCAGACGTGCTTGCGAAGATTCTTGTGACATTAACAAACAGGACTGCTACTTCAATCAGACTACCATAGGTCTTGAATGTGTATCTGTTGTCGAATCAGCTTGCACGACTCCATTGGGATTTGAAATCAGATGTGGATATTTGTCAAAGCTGCAGATATTCATCGAAGATATTATACTTGGCATTGTTAAAGGACAATCACAAACAACCACCAGGACAATAAGTTCAGATTTATCAACCGAAACCAATGATTTATACTACAAAGATTATGATTCTGAGATTGGCATCAAGTTAGGAAGAATTATCGGCAGTTATCTCTTACCACCATTTATAGTGAGATTTACATTGGGCCTCGTGGTTTTCTGTGTGCTATTGATATATAGATGCCGAAGAAGACATATTTCAATTTACAAAAATATTGAAGTTTTTCTGCGTGGAAGTACCTTGATGCCAATAAGATATTCTTACAAAGACATAAAGAAGATGACTAGAAGTTTCAAGGACAAGCTAGGAGAAGGAGGCTTTGGCTCTGTTTATAAAGGAAAGTTAAGTAGTGGACCATTTGTTGCCATAAAGATGTTGGGTAAATCAAAGGGTAATGGACAAGATTTCATTAATGAAGTCGCAACTATAGGCAGAATACATCATGCCAATGTGGTTAGACTTATTGGTTTTTTTGTTGAGAAATCGAAAGGTGCCCTTGTTTATGAATTCATGCCCAACGGTTCTCTTGATAAATATATTTCTAATAAAGAGGATGCTATCTTTTTAACTTCAAAGAAAATGTATGAGATATCTCTTGGAGTGGCTCGTGGAATCGCTTATTTGCATCAAGGGTGTGACATGCAAATCTTGCATTTTGATATCAAACCCCACAACATCCTTCTTGACGAGAACTTTATCCCCAAAGTTTCAGACTTTGGTCTTGCAAAACTCTATCCAAATGACATTAGTATTGTTACTTTAACTGCAGCTAGAGGAACACTTGGTTACATGGCTCCTGAGTTGTTCTACAAAAATATTGGAGGGGTATCCTACAAGGCTGACATGTATAGTTTTGGTATGCTTTTAATGGAAATTGCAAGACAGAGAAGAAATTTAAATCCACATGCGGATCATTCAAGCCAAAATTTCTTTCCCTCTTTGATTTATAATCTATTGATTGAAGAAAGAGAGATTGAAATGGATGAAATTACTGATGAGGAAAAAAATATTGTGAAGAAAATGTTCATAATTGCGTTATGGTGTATCCAATTAAAACCAATTGACCGTCCTGCAATGAACAAAGTAATAGAGATGCTTGAAGGAAATATTGAGGATATTGAAATGCCTCCAAAGCCTTCTTTTTATCCAAATGAAATGATTCAAGAAGTCAACTCTAATGATATGGAATCAGAAACTGATACTGATACTGATTGTGTTAGTATTATTGAGGAAGATACAACAGAGCCTTTATTGATGAACTCTGCCTAA 4389 0.3657 MSRGMESFLWFLQIVMVVVLILLHHTHQTCDAINNNQIYCPPSSCGKITNIKHPFRLKNDPTSCGDPRYELSCENNMTVLPLFSGKYYVKSIDYKFYTIRLVDPGIQEGNCSSVPRYFLTTSNFTSSYNYSYRGDPYEVGSPPWVGHVLYLNCSKPVKNDPMYVDTSPCIKWNSKGHVYAIANDFNTGRLNVGCQVKLVATSSDSSLFKNFVNNISQPFSYAEIHGILNYGFDLTWVRRACEDFFDTNLQNCQFNGEIGGLECELDYCRTPLGKFVNCEHLSKVRIFMEDIILGIVKGLLQIKGTTKSSELTHGTIGLPKKMSDSKVGIELGRVTGRYILPPFIVRFTLGLMVFFVLLVYTCRRRHISIYENIEVFLRGSTLMPIRYSYKDIKKMTGNFKDKVGEGGFGSVYRGRLSSGPFVAVKMLGKLKGNGQDFISEVATIGRIHHANVVRLIGFCFERSKRALVYEFMSNGSLDKYISSKEDAIFLTSKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDNSIVTLTAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMANKRRNLNPNADRSSQLFFPFWIYNQLIEEREIQMDEISEEEKNNVKKMFIIALWCIQLKPSDRPAMNKVIEMLEGNIEVIEMPSKPSFYPNEIIEDIESETDTDSDSISFIVECTSKPLLMNSYTLILLVCMLCSISASVLMRRRMESFLCFLQVMFVVLILHHYHHQVCDATITSKNQTYCSPSSCGKITNIKHPFRLKNDPTACGDPRYELSCENNMTVLTLFSGKYYVKSINYKYYTIRVVDPGIEDRDCSSIPRYFITTSNFTSYYNYQYHGDLYEARSQSSWLGHIIYLNCSKPVKKDPMYVDISSCVKCNSEGHVYAIAGNIKTGRLNVDCQVKLVAMSSAPALKAHISTGQSYSSYMEIHEMLSYGFYISWTRRACEDSCDINKQDCYFNQTTIGLECVSVVESACTTPLGFEIRCGYLSKLQIFIEDIILGIVKGQSQTTTRTISSDLSTETNDLYYKDYDSEIGIKLGRIIGSYLLPPFIVRFTLGLVVFCVLLIYRCRRRHISIYKNIEVFLRGSTLMPIRYSYKDIKKMTRSFKDKLGEGGFGSVYKGKLSSGPFVAIKMLGKSKGNGQDFINEVATIGRIHHANVVRLIGFFVEKSKGALVYEFMPNGSLDKYISNKEDAIFLTSKKMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDISIVTLTAARGTLGYMAPELFYKNIGGVSYKADMYSFGMLLMEIARQRRNLNPHADHSSQNFFPSLIYNLLIEEREIEMDEITDEEKNIVKKMFIIALWCIQLKPIDRPAMNKVIEMLEGNIEDIEMPPKPSFYPNEMIQEVNSNDMESETDTDTDCVSIIEEDTTEPLLMNSA* 1463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3141 1462 ProSiteProfiles Protein kinase domain profile. 1136 1421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 Coils Coil 617 637 - -
Tpr1g3141 1462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1256 1268 IPR008271 GO:0004672|GO:0006468
Tpr1g3141 1462 SUPERFAMILY Protein kinase-like (PK-like) 382 668 IPR011009 -
Tpr1g3141 1462 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 694 IPR045874 GO:0004672
Tpr1g3141 1462 PANTHER RUST RESISTANCE KINASE LR10-RELATED 751 1436 IPR045874 GO:0004672
Tpr1g3141 1462 Pfam Protein kinase domain 1139 1404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 Pfam Protein kinase domain 400 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 Gene3D Transferase(Phosphotransferase) domain 1 472 678 - -
Tpr1g3141 1462 Gene3D Transferase(Phosphotransferase) domain 1 1211 1416 - -
Tpr1g3141 1462 SMART serkin_6 397 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 SMART serkin_6 1136 1406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 ProSitePatterns Protein kinases ATP-binding region signature. 1142 1164 IPR017441 GO:0005524
Tpr1g3141 1462 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 751 1436 - -
Tpr1g3141 1462 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 14 694 - -
Tpr1g3141 1462 SUPERFAMILY Protein kinase-like (PK-like) 1121 1407 IPR011009 -
Tpr1g3141 1462 ProSiteProfiles Protein kinase domain profile. 397 682 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3141 1462 Gene3D Phosphorylase Kinase; domain 1 378 471 - -
Tpr1g3141 1462 Gene3D Phosphorylase Kinase; domain 1 1117 1210 - -
Tpr1g3141 1462 Pfam Wall-associated receptor kinase galacturonan-binding 776 839 IPR025287 GO:0030247
Tpr1g3141 1462 Pfam Wall-associated receptor kinase galacturonan-binding 40 103 IPR025287 GO:0030247
Tpr1g3141 1462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Tpr1g3141 1462 ProSitePatterns Protein kinases ATP-binding region signature. 403 425 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3141 Tpr-Chr1 35922095 35939259 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3141 386 699 Receptor kinase-like Gene Family AT5G38280 49.533 5.33e-98 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3141 Pkinase 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3141 - - aip:107619931 932.554