Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3138 ATGGACTCATTTTTATGTTTCCTTCAAATTATGGTGGTTGTACTAGTGCTACATCATCATCAAGCATGTGATGCAACTACTAATAGTAGTAACAATAACCAAACATATTGCCCAATTTCTTCATGCGGAAAAATCACAAACATAAGACATCCGTTTCGGCTTAAGAATGATCCATCAGCCTGTGGTAATCCGAAGTACGAGTTATCCTGTGAAAACAACGTCACAACATTAACTCTGTTTTCGGGGAAATACTATGTTAAATCAATCAACTACGAAGACTACACAGTTCAAGTTGTTGATCCCGGAATTGAAGAGGGGAATTGCTCCTCCATTCCTAGCTATTTCCTAAGTACATCCAATTTTACAATTATCTACGACTATGATGACTACCATATGTATCCATATCAAATCGACTATCATTTTGGGTTCGGGTACGGGTACATAATATACTTGAACTGTAGCAAACCAGTGAAGGACGATCTTGAGTATGTTGATACATCTCCGTGTAGAGTCAACTCCGACTCCAAAAGCTATGTTTATGCTTTTGCGGGGGAGAACTATCGGGAAGAAGATTATTGGAGATCCAATAAGTATTTGTCAGTTGGGAGATTAAAAGATTATTGCAAAGTGAAGCTTGTTGCTATGTCATCATTATTAGTTAATCCTAATGTCAGAGATGATGTACCAAATCGACCTCTTTCGTATGAGCAAATTCATGGAATGCTAGTCTATGGATTTCAGTTATCGTGGATAAGTGGTGCTTGTAGAGATTCTTGCGGCGATAATCAACGGTGCTACTTTAATCAAACCACTAGAGATTTTGAATGTTATGAATCAACTGATTATTGCGATTATCCATTGGGAATTGAAGTCGCCAAAAGATGTGACCAACTATCAAAGCAGCTCATAATAGAGGAAGATGTAATACTTGGCTTTGTTAAAGGAGTAGTACAAATATTTGGCATAACAAAAAGCTCTGAATTATCCAGTGAACTTAAAGATTCTAAAACTGCCATCGAGATAGGAAGAGTGACAGGAAGATACCTTTTGCCATTATTTATGTCGAGATTTGTCCTAGGCCTTGTGGTTTTCTTCGTATTATTGATATATACATGTCGGAAAAGGCATATATCAATGTATGAAAATATTGAAGTTTTTCTTAGAGGGAGTACCTTGACGCCAATTAGGTATTCGTACAAAGAAATAAAAACCATGACTAGAAGTTTTAGAGATAAGTTAGGCGAAGGAGGCTTTGGTGCTGTTTATCAAGGAAAGCTAAGGAGCGGGCCATTTGTGGCCATAAAAATGTTGAGTAAATCTAAGGGTAATGGACAAGATTTCATTAATGAAGTTGCAACCATAGGAAGAATACATCACACCAATGTAGTTCGACTTATTGGATTTTGTTTTGAAGGATCTAAACGTGCTCTTGTTTATGAATTTATGCCCAATGGTTCTCTTGATAAATATATTTCTTCTAGAGAGGATGCCATCTCTCTCACTTATAAGCAAATGTATGAGATATCTCTTGGAGTAGCTCGTGGTATTGCTTATTTGCATCAAGGATGTGACATGCAAATTTTGCATTTTGACATAAAGCCCCATAACATCCTTCTCGACGAGAACTTTATCCCAAAGGTTTCCGATTTTGGTCTTGCAAAGCTTTATCCTAATGACATGAGCATTGTGACTCTAACTGCAGCAAGAGGAACAATTGGTTACATGGCTCCTGAATTATTCTACCAAAATATTGGAGGAGTGTCTTACAAGGCAGATGTCTACAGTTTTGGAATGCTTTTAATGGAAATGGCAAGTAAGAGAAGAAATTTGAATCCACATGCAGATCGTTCAAGCCAACTTTTCTTTCCCTTTTGGATCTACAATCAATTGATTGAGGAAAAGGACATAGAAATGGATGAACTGACTAATGAGGAAATGATTAATGTGAAAAAGATGTTCATAACTGCATTATGGTGTATACAATTAAAACCAAGTGATCGTCCTTCAATGAACAAAGTAATTGAGATGCTTGAAGGAAATATTGAGAACATTGAAATGCCTCCAAAACCTTCTCTATATCCAAATGAAACTATTCAGAATGATCTTGAAGAAACCTCCGATGAAATTGAGTCAGATGCTGATGATGACTCTGCTAGTTTCTTGAAGGAAACGAAATCATAG 2181 0.3668 MDSFLCFLQIMVVVLVLHHHQACDATTNSSNNNQTYCPISSCGKITNIRHPFRLKNDPSACGNPKYELSCENNVTTLTLFSGKYYVKSINYEDYTVQVVDPGIEEGNCSSIPSYFLSTSNFTIIYDYDDYHMYPYQIDYHFGFGYGYIIYLNCSKPVKDDLEYVDTSPCRVNSDSKSYVYAFAGENYREEDYWRSNKYLSVGRLKDYCKVKLVAMSSLLVNPNVRDDVPNRPLSYEQIHGMLVYGFQLSWISGACRDSCGDNQRCYFNQTTRDFECYESTDYCDYPLGIEVAKRCDQLSKQLIIEEDVILGFVKGVVQIFGITKSSELSSELKDSKTAIEIGRVTGRYLLPLFMSRFVLGLVVFFVLLIYTCRKRHISMYENIEVFLRGSTLTPIRYSYKEIKTMTRSFRDKLGEGGFGAVYQGKLRSGPFVAIKMLSKSKGNGQDFINEVATIGRIHHTNVVRLIGFCFEGSKRALVYEFMPNGSLDKYISSREDAISLTYKQMYEISLGVARGIAYLHQGCDMQILHFDIKPHNILLDENFIPKVSDFGLAKLYPNDMSIVTLTAARGTIGYMAPELFYQNIGGVSYKADVYSFGMLLMEMASKRRNLNPHADRSSQLFFPFWIYNQLIEEKDIEMDELTNEEMINVKKMFITALWCIQLKPSDRPSMNKVIEMLEGNIENIEMPPKPSLYPNETIQNDLEETSDEIESDADDDSASFLKETKS* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3138 726 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 11 707 - -
Tpr1g3138 726 Pfam Wall-associated receptor kinase galacturonan-binding 37 100 IPR025287 GO:0030247
Tpr1g3138 726 ProSiteProfiles Protein kinase domain profile. 407 681 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3138 726 SMART serkin_6 407 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3138 726 Coils Coil 695 715 - -
Tpr1g3138 726 Gene3D Transferase(Phosphotransferase) domain 1 482 688 - -
Tpr1g3138 726 PANTHER RUST RESISTANCE KINASE LR10-RELATED 11 707 IPR045874 GO:0004672
Tpr1g3138 726 Pfam Protein kinase domain 411 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3138 726 ProSitePatterns Serine/Threonine protein kinases active-site signature. 527 539 IPR008271 GO:0004672|GO:0006468
Tpr1g3138 726 ProSitePatterns Protein kinases ATP-binding region signature. 413 435 IPR017441 GO:0005524
Tpr1g3138 726 MobiDBLite consensus disorder prediction 699 726 - -
Tpr1g3138 726 SUPERFAMILY Protein kinase-like (PK-like) 392 678 IPR011009 -
Tpr1g3138 726 Gene3D Phosphorylase Kinase; domain 1 387 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3138 Tpr-Chr1 35888075 35906262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3138 29 693 Receptor kinase-like Gene Family AT5G38260 34.366 1.81e-111 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3138 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3138 - - mtr:MTR_1g027830 852.818