Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3136 ATGATGATTTGCAGTCACAGTACTTGTTCCTTCGTGATAGCAATGACATTAATGCTAGTGTGGCTGCTCGCGAATGAACATGAACAGAATATCCCTTCCGTTGGATGTCCTTTCAATCTAACTTGTACACATGATAACAACAAGCATATTCTTGAACTACCTGCTCATCCAATCCCTATAAAACTCCGCGTTAGTTACATTAACTACACATCGCAAGTACTTGAAGCACATGATCTTGAAAATTGTCTTCCTCGACTCTTACTTCAGCAGTACAATTTCTCTTCATCAATTTATCCTTTTCAGATTGTCTCTTCAACGCCTTCACAATTTGATGATTTTAACAATATTAGTTTCTTTGATTGTTCTGCACTACGAAAACATCACCTGACAGACGACTATATATATTATTGGAACTACGAAAGTGTGCAGCAGGACATGATCTCTTGCCCAATTTATGTCGCAGGATTTGACGAAGATATAGTTGAATCAAACCTTGTATCTTGCACCAAACTGCCTGAACGAGTTTTGCCCCTTAATCTTCCGGGAGATTCTGTGTATGGGATACAACAAAACTCAATGTTACTGTCATGGTCGGAAACAAATCTTGACAAAGAATGTTTAAAATGTAAGCACAGATCAAAGAAGAAGACTATAACTATTCTTTTGTCTTCTGCAGGTGTAATCATTGGTTCGACTGTATTTGTTCTTCTATTTGGTGCCATTTTTCAAATATATTGGTATTTTAAGATGAAAGGTGAAGATCATGAAAGAATTGAAAACTTTTTGAAGGATTACAGAGCTTTAAAGCCAACTAGATTCTCTTATGCAGACTTAAAGAGAATTACACATAATTTTAAGGATAAGTTAGGCGAAGGAGCTCATGGAGCTGTTTACAAAGGTAAATTGTCGAACCAAATTCTGGTTGCTGTGAAGATTCTTAATAATGCAGAGGGTGATGGGAAGGAGTTCATAAATGAAGTGGGAACCATGGGCAAAATCCACCATCTCAATGTCGTCCGTTTGCTTGGCTTCTGCGCAGATGGATTTCGCCGTGCTTTAGTTTATGACTTTTTTCCAAATGGTTCGTTGGAGAAATTCATTTCTCCTTCGAACAACAAAGATAATTTCCTTGGATGGGAAAAATTACAACAAATTGCTCTAGGCATAGCAAATGGTATTGAGTATCTCCACCAAGGTTGTGATCAAAGAATTCTACACTTTGACATCAATCCTCACAATGTTTTGATAGATGACAATTTCATTCCCAAAATCACAGATTTTGGTTTGGCTAAAATGTGTTCGAAAAATCAAAGTATTGTATCCATGACTACAGTTAAGGGAACATTAGGCTACATGGCACCTGAAGTTTTTTCAAGAAACTTCGGAAATGTCTCGTATAAGTCTGATATATACAGTTACGGTATGTTGTTATTGGAGATGGTTGGAGGAAGAAAGAATACAAAAACAACGGGTGGTGAAGAAAATGTTCAAGTTGTGTATCCAGATTGGATCCATAATTTGCTGAAAGCAGAAGATATACAAATCCCTATTGATGAAGAGGGAGATTTTAGAATTGCAAAAAAAATGGCAACAGTGGGACTTTGGTGTATCCAATGGCACCCTTTGCATCGCCCGCCAATGAAAACTGTGGTACAAATGCTTCAAGGAGAGGGGGACAAGTTAAAAGTACCATGCAATCCTTTTGAACCTACAACTACAACTAATACAACTGCAAATATTTTTGTAGAACGTATGAATTTGGAGTTGGATGTGATTCAAGAATTAGATTAG 1791 0.3707 MMICSHSTCSFVIAMTLMLVWLLANEHEQNIPSVGCPFNLTCTHDNNKHILELPAHPIPIKLRVSYINYTSQVLEAHDLENCLPRLLLQQYNFSSSIYPFQIVSSTPSQFDDFNNISFFDCSALRKHHLTDDYIYYWNYESVQQDMISCPIYVAGFDEDIVESNLVSCTKLPERVLPLNLPGDSVYGIQQNSMLLSWSETNLDKECLKCKHRSKKKTITILLSSAGVIIGSTVFVLLFGAIFQIYWYFKMKGEDHERIENFLKDYRALKPTRFSYADLKRITHNFKDKLGEGAHGAVYKGKLSNQILVAVKILNNAEGDGKEFINEVGTMGKIHHLNVVRLLGFCADGFRRALVYDFFPNGSLEKFISPSNNKDNFLGWEKLQQIALGIANGIEYLHQGCDQRILHFDINPHNVLIDDNFIPKITDFGLAKMCSKNQSIVSMTTVKGTLGYMAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNTKTTGGEENVQVVYPDWIHNLLKAEDIQIPIDEEGDFRIAKKMATVGLWCIQWHPLHRPPMKTVVQMLQGEGDKLKVPCNPFEPTTTTNTTANIFVERMNLELDVIQELD* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3136 596 SUPERFAMILY Protein kinase-like (PK-like) 265 554 IPR011009 -
Tpr1g3136 596 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 24 595 - -
Tpr1g3136 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 24 595 IPR045874 GO:0004672
Tpr1g3136 596 Gene3D Transferase(Phosphotransferase) domain 1 358 564 - -
Tpr1g3136 596 Gene3D Phosphorylase Kinase; domain 1 257 357 - -
Tpr1g3136 596 ProSiteProfiles Protein kinase domain profile. 283 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3136 596 Pfam Protein kinase domain 285 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3136 596 ProSitePatterns Protein kinases ATP-binding region signature. 289 311 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3136 Tpr-Chr1 35878284 35880554 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3136 249 567 Receptor kinase-like Gene Family AT1G66910 47.692 8.16e-102 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3136 Pkinase 1.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3136 - - adu:110273083 662.914