Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3133 ATGGTAAATGATAATCAGTTGGTTTTGACATGGTCAAAACCCAATTGTAGCAAGTGTGAAGAAGAAGGTAAGATGTGTAAACTTAAAAACAACGGAACTGAAGATGGTGAGATAGAATGTTTTGATCGTCATCACAAACCAACTAAGAAGATACTTCTATATGTCACAGTTGGGTTCGTGGGTTTAGTTTTGGTGACATTGATTCTTACAGCATGTTTGCATTTCTATACCTATTTTAAACTGAAAGGTGAAGATGAGACTAGAATTGAAAAGTTCTTAGAGGATTATAGGACGCTCAACCCTGCGAGATTCTCATATACTGATATAAAAAGGATTACAAATAGTTTTAGGGAAAAGTTAGGTGAAGGAGCTCACGGAGCAGTTTTCAAAGGTAAATTATCTAATGAAATACTTGTGGCTGTGAAGATGCTAAACAACGCAGAGGGCGATGGAAAAGAGTTCATTAACGAAGTGAAAGCAATGGGAAAAGTTCATCACATCAATGTGGTTCGCTTGGTTGGATTTTGTGCTGATGGATGCTATCGTGCTCTTGTTTATAATTTCTTTCCGAATGGTTCATTACAAAACTTCATAACCAAACCTGATGACATTGATCGCTTTCTCGGTTGGGAGAAGCTACAACAAATTGCTCTCGGCATAGCCAAAGGTATTGAGTATCTTCATATGAGTTGTGATCAACGAATTCTTCACTTCGATATTAATCCCCATAATGTATTATTAGACGACAAGTTTGTTCCAAAAATTACAGATTTTGGTTTGGCTAAATTGTGTCCTAAAAATCAAAGTGTAGTGTCAGTAACTGCTGCTAGAGGGACTTTGGGTTACATTGCACCTGAAGTATTTTCGAGAAACTTTGGAAATGTATCGTATAAAGCTGACATATATAGTTACGGGATGTTATTACTTGAAATGATTGGAGGAAGAAAGAATATCGGTCAACTATCTGAAGAAAATTTTCAAATTTTGTATCCCGAATGGATTCATAATCTACTTGAAGGACAAGATATGCAAATGACTATTGAAGGAGAAGAAGATGATAAAATTTTAAAGAAACTTGCAATTGTAGGACTATGGTGCATTCAGTGGCACCCAATAAATCGTCCATCTATAAAAGTTGTGCTGCAAATGTTAGAGGCTCTAGAAGAAGAGAAGTTGATTGTGCCACCAAACCCTTTTAACTCAACAATTTCTAGAGTTGTTGAAACCCAAACAAAATTTTCAACCTTAGAGTTGGAAGCTATACATGAATGA 1272 0.3593 MVNDNQLVLTWSKPNCSKCEEEGKMCKLKNNGTEDGEIECFDRHHKPTKKILLYVTVGFVGLVLVTLILTACLHFYTYFKLKGEDETRIEKFLEDYRTLNPARFSYTDIKRITNSFREKLGEGAHGAVFKGKLSNEILVAVKMLNNAEGDGKEFINEVKAMGKVHHINVVRLVGFCADGCYRALVYNFFPNGSLQNFITKPDDIDRFLGWEKLQQIALGIAKGIEYLHMSCDQRILHFDINPHNVLLDDKFVPKITDFGLAKLCPKNQSVVSVTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMIGGRKNIGQLSEENFQILYPEWIHNLLEGQDMQMTIEGEEDDKILKKLAIVGLWCIQWHPINRPSIKVVLQMLEALEEEKLIVPPNPFNSTISRVVETQTKFSTLELEAIHE* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3133 423 Gene3D Phosphorylase Kinase; domain 1 88 188 - -
Tpr1g3133 423 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Tpr1g3133 423 SUPERFAMILY Protein kinase-like (PK-like) 94 385 IPR011009 -
Tpr1g3133 423 Gene3D Transferase(Phosphotransferase) domain 1 189 395 - -
Tpr1g3133 423 PANTHER RECEPTOR-LIKE KINASE 5 423 - -
Tpr1g3133 423 ProSiteProfiles Protein kinase domain profile. 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3133 423 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 423 IPR045874 GO:0004672
Tpr1g3133 423 Pfam Protein kinase domain 117 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3133 Tpr-Chr1 35807332 35809054 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3133 86 398 Receptor kinase-like Gene Family AT1G66980 48.287 8.43e-97 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3133 Pkinase 2.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3133 - - gmx:100819302 583.178