Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3132 ATGGTAACCTGTTCCAATATTTTGGTGGTCACGATTCTCATCTTGGTTTCCAATTTCAACACAGGGATATGGCTAGTTAATGGCTGTAGCGGAAGGGATTTCAGATGTGGACCTGATGGTCCACCAATCCGATTTCCCTTCCGACTTAAAGACAAAGAAACCGAACAAAGTTGCGGTTATAATGGCTTTGATCTTACTTGTTCAGACACAAACAAAACTCAAATTGAACTCCCTTCACATTCTGGTCCAATTATACTCGAAGTCATGAAAATAATTTATCCACACAACCTTCTATACTTAACTGACCCTGAAAATTGTCTTCCTAGACAGTTTCTAAAGCTCCTTCGATCACCAATTTCTCCTTTTCCATTCTATGAGAGTCCCGGAGTCAGGTATAAGTATAACCTCACCATCCTCCATTGTAGTTCATCACTCTGCCCGGTTATTGTTGTTGATTCTAGTGATACACTCTTAAATTCTGTTTTGGACCCAATTGACTGCACTAAAACTTCAGATTTTACTTCTTCAGCGTTATACTGGGGGGTAAATAATAATCTGTTGGTTTTGACATGGTCAAAACCCAATTGTAGCAAGTGTGAAAAAGAAGGTAAGATGTGTAAACTTAAAAACAACGGAACTGAAGATGGTGAGATAGAATGTTTTGATCGTCATCACAAACCAACTAAGAAGATACTTCTATATGTCACAGTTGGGTTCGTGGGTTTAGTTTTGGTGACATTGATTCTTACAGCATGTTTGCATTTCTATACCTATTTTAAACTGAAAGGTGAAGATGAGACTAGAATTGAAAAGTTCTTAGAGGATTATAGGACGCTCAACCCTGCGAGATTCTCATATACTGATATAAAAAGGATTACAAATAGTTTTAGGGAAAAGTTAGGTGAAGGAGCTCATGGAGCAGTTTTCAAAGGTAAATTATCTAATGAAATACTTGTGGCTGTGAAGATGCTAAACAACGCAGAGGGCGATGGAAAAGAGTTCATTAACGAAGTGAAAGCAATGGGAAAAGTTCATCACATCAATGTGGTTCGCTTGGTTGGATTTTGTGCTGATGGATGCTATCGTGCTCTTGTTTATAATTTCTTTCCGAATGGTTCATTACAAAACTTCATAACCAAACCTGATGACATTGATCGCTTTCTCGGTTGGGAGAAGCTACAACAAATTGCTCTCGGCATAGCCAAAGGTATTGAGTATCTTCATATGAGTTGTGATCAACGAATTCTTCACTTCGATATTAATCCCCATAATGTATTATTAGACGACAAGTTTGTTCCAAAAATTACAGATTTTGGTTTGGCTAAATTGTGTCCTAAAAATCAAAGTGTAGTGTCAGTAACTGCTGCTAGAGGGACTTTGGGTTACATTGCACCTGAAGTATTTTCGAGAAACTTTGGAAATGTATCGTATAAAGCTGACATATATAGTTACGGGATGTTACTACTTGAAATGATTGGAGGAAGAAAGAATATCGGTCAACTATCTGAAGAAAATTTTCAAATTTTGTATCCCGAATGGATTCATAATCTACTTGAAGGACAAGATATGCAAATGACTATTGAAGGAGAAGAAGATGATAAAATTTTAAAGAAACTTGCAATTGTAGGACTATGGTGCATTCAATGGCACCCGATAAATCGTCCATCTATAAAAGTTGTGCTGCAAATGTTAGAGGCTCTAGAAGAAGAGAAGTTGATTGTGCCACCAAACCCTTTTAACTCAACAATTTCTAGAGTTGTTGAAACCCAAACAAAATTTTCAACCTTAGAGTTGGAAGCTATACATGAATGA 1812 0.3703 MVTCSNILVVTILILVSNFNTGIWLVNGCSGRDFRCGPDGPPIRFPFRLKDKETEQSCGYNGFDLTCSDTNKTQIELPSHSGPIILEVMKIIYPHNLLYLTDPENCLPRQFLKLLRSPISPFPFYESPGVRYKYNLTILHCSSSLCPVIVVDSSDTLLNSVLDPIDCTKTSDFTSSALYWGVNNNLLVLTWSKPNCSKCEKEGKMCKLKNNGTEDGEIECFDRHHKPTKKILLYVTVGFVGLVLVTLILTACLHFYTYFKLKGEDETRIEKFLEDYRTLNPARFSYTDIKRITNSFREKLGEGAHGAVFKGKLSNEILVAVKMLNNAEGDGKEFINEVKAMGKVHHINVVRLVGFCADGCYRALVYNFFPNGSLQNFITKPDDIDRFLGWEKLQQIALGIAKGIEYLHMSCDQRILHFDINPHNVLLDDKFVPKITDFGLAKLCPKNQSVVSVTAARGTLGYIAPEVFSRNFGNVSYKADIYSYGMLLLEMIGGRKNIGQLSEENFQILYPEWIHNLLEGQDMQMTIEGEEDDKILKKLAIVGLWCIQWHPINRPSIKVVLQMLEALEEEKLIVPPNPFNSTISRVVETQTKFSTLELEAIHE* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3132 603 Gene3D Transferase(Phosphotransferase) domain 1 369 575 - -
Tpr1g3132 603 PANTHER RUST RESISTANCE KINASE LR10-RELATED 23 603 IPR045874 GO:0004672
Tpr1g3132 603 SUPERFAMILY Protein kinase-like (PK-like) 274 565 IPR011009 -
Tpr1g3132 603 Pfam Protein kinase domain 297 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3132 603 ProSitePatterns Protein kinases ATP-binding region signature. 300 322 IPR017441 GO:0005524
Tpr1g3132 603 ProSiteProfiles Protein kinase domain profile. 294 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3132 603 Gene3D Phosphorylase Kinase; domain 1 268 368 - -
Tpr1g3132 603 Pfam Wall-associated receptor kinase galacturonan-binding 29 101 IPR025287 GO:0030247
Tpr1g3132 603 PANTHER RECEPTOR-LIKE KINASE 23 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3132 Tpr-Chr1 35807150 35835452 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3132 266 578 Receptor kinase-like Gene Family AT1G66980 48.287 2.17e-94 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3132 Pkinase 7.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3132 - - aip:107619931 660.988