Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3128 ATGTTTACAGGAACGTATTTGCTGCCATATATTACAATTAGAATTATGTTGGGCATCATATTGTTCACTATGCTGTTGATTAGTACGTATCGAAGAAGACATGCATCAATATATGAAAATATCGAAGATTTTTTGCAAGGTAATACTCTTATGCCAATAAGGTATTCATACAAAGAGATAAAGCAGATGGCTAAAAATTTTACGGTAAAATTGGGTGAAGGAGGTTATGGAGATGTGTATAGAGGAAATCTAATTAGTGGACCATTTGTAGCCATAAAGATGTTGAAGATAAAATCAAATGCTAATGGGCAAGAATTCATAAGTGAAGTTGCAACCATAGGAAGAATATACCACTCAAATGTGGTAAGACTTGTCGGGTTTTGTGTCGAAGGATCAAAACGTGCTCTTGTTTATGAATACATGCCTAATGGCTCTCTTGATAAATATATTTTCAACAAAGAGGGTGTTGTATTTTTAACTTACAACCAAATATATGAGATATCTCTTGGAGTGGCTCGTGGAATTTCTTATCTTCATCAGGGTTGTGATATGCAAATTTTACATTTTGATATTAAGCCTCATAACATCCTTCTTGACAAAAATTTCATCCCCAAAGTTTCGGACTTTGGTCTTGCAAAGCTTTATCCTATTGACAATAGCATCGTCACTTTGACGGTAGCTAGAGGAACAATTGGGTACATGGCTCCTGAATTGTTCTACCAAAATATCGGAGGAATATCATACAAGGCTGATGTGTATAGCTTTGGAATGCTTTTGATTGAAATGACAAGTAGGAGAAGAAATTTGAATCCACGTGCTGAACATTCAAGTCAACTTTACTTTCCCTTATGGATTTATGATCAATTGTATAAAAATAGAGAGAGGGAAATGGAAGATGTTATCATGGAAGAAATTAATGATGTTTTGAAGAAAATGTTCCTAGTTGCACTTTGGTGTATACAGTTGAAACCCGTTGATCGTCCTTCAATGAAAAAAGTAGTCGAGATGCTCGAAGGAGATATTGAAAATATTGAAATGCCTCCAAAACCTTTACTATATCCAGGTGAAACAATTCAAGAGAATCTTGATAACAACTCAAAGGAAACTATATCAGATGTTGGCTCTACCAGTTATGTGGAGGAAATTGCAACTAATCCTTTATTGAAGTACTATTCAGCTTGA 1182 0.3469 MFTGTYLLPYITIRIMLGIILFTMLLISTYRRRHASIYENIEDFLQGNTLMPIRYSYKEIKQMAKNFTVKLGEGGYGDVYRGNLISGPFVAIKMLKIKSNANGQEFISEVATIGRIYHSNVVRLVGFCVEGSKRALVYEYMPNGSLDKYIFNKEGVVFLTYNQIYEISLGVARGISYLHQGCDMQILHFDIKPHNILLDKNFIPKVSDFGLAKLYPIDNSIVTLTVARGTIGYMAPELFYQNIGGISYKADVYSFGMLLIEMTSRRRNLNPRAEHSSQLYFPLWIYDQLYKNREREMEDVIMEEINDVLKKMFLVALWCIQLKPVDRPSMKKVVEMLEGDIENIEMPPKPLLYPGETIQENLDNNSKETISDVGSTSYVEEIATNPLLKYYSA* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3128 393 SMART serkin_6 65 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3128 393 Pfam Protein kinase domain 69 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3128 393 PANTHER STRESS-INDUCED RECEPTOR-LIKE KINASE 10 368 - -
Tpr1g3128 393 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Tpr1g3128 393 SUPERFAMILY Protein kinase-like (PK-like) 50 338 IPR011009 -
Tpr1g3128 393 PANTHER RUST RESISTANCE KINASE LR10-RELATED 10 368 IPR045874 GO:0004672
Tpr1g3128 393 Gene3D Transferase(Phosphotransferase) domain 1 141 350 - -
Tpr1g3128 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Tpr1g3128 393 Gene3D Phosphorylase Kinase; domain 1 41 140 - -
Tpr1g3128 393 ProSiteProfiles Protein kinase domain profile. 65 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3128 Tpr-Chr1 35749660 35751092 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3128 16 361 Receptor kinase-like Gene Family AT1G66910 46.089 6.72e-105 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3128 Pkinase 7.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3128 - - cam:101508554 679.093