Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3126 ATGTGGTGTAAATATTACTCTACACTAGTTTTTCCATTCTTTTGCTTCTTTTTGAGTGTAAATTACTACACTACCCTTGCTTCAGCTAATAGTGAATGCTTGAAAACAAGATGTAATCACAAAGATGCTCCAAGTCCAACTATTCAATACCCTTTTAGACTTCAAAATATTCAATCACAAAATTGTGGAAAAATTGGGTTTGATATTTCATGCAATAAGAATCACCAAACCATACTAGAATTGCCAAATTCAATAAACTTTGTTGTCAACAAAATTGATTACAAGTCACAAAAGATTCATGTGACCAACCCAAATGGATGTCTTCCAAAACTCCTTTCAAATCTAAATATAACTTCTACTCCTTTTCATTTTTTTGATTATTCAAATTCCAATTATACCCTCTTCAATTGTTCATCCATGAACACTGCTTTACAATCTCATTATTCTTCCATTAAATGTCTTTCTTCTCATGGATACCAAGTTTATGCATTGAATTCTACACTTAGAATTAAGGATGTTACTTTGACATATTGTACCAAGTTGTATGATATGTCTTTTGTTCCAAAAGATGTTGTATTTAGCAATGGAGTTGATCTTGTTTTAGGATGGGATACAAGTTGTAGCAATGGAAGTAAAATAGAACATGATTGTTACAACATTGTCAACGAATCTAACGGTGGAAAGAAAAAAGAGCAGATTCTAGTACCAATACTATCATGTCTTGGAATTTTACTACTAGTCACTATATTATATCATGTTCGATATCGAACTCAAAAAGAAGAGAATGAAGCAAGAATAGAGAAGTTCTTAGAAGATTATAGAGCATTAAAACCAACAAGGTATTCCTATTCTGACATAAAAAGGATCACAAACAATTTCAAGAATGAACTTGGACAAGGAGCATACGGAACGGTGTACAAAGGTAAACTATCTGGCGACATATATGTCGCAGTCAAGCTTCTCAAAACATCCACAGGAAACGGACCTGAGTTCATCAATGAAGTAGGAACAATGAGTCAAATTCACCACGTCAATGTTGTTCACTTAGTAGGCTTTTGTGCCGATGGACACACACGAGCTCTGGTTTACGAGTATTTACCAAATGGTTCGTTGCAGAAATTCATTTCCACAACGGATTTTAAAAACCATTTTTTGAGTTGGGAGAAGTTACAAGAAATTGCGCTTGGAATAGCCAAAGGGATTGAGTATCTTCACCAAGGATGTGACCAAAGGATACTTCACTTCGATATAAAACCGCACAATATCTTACTTGACAATAACTTCACTCCCAAGATATCTGATTTTGGTCTAGCTAAACTTTGTTCTAAAGATCAGAGTGCGGTTTCCATGACTGCGGCTAGGGGGACTATTGGTTATATAGCACCGGAAGTCTTTTCTAGAAACTTTGGTAATGTGTCGTATAAGTCTGATGTGTATAGTTTTGGAATGTTGTTGCTTGAGATGGTTGGGGGAAGGCAAAATGCTGATGTTGTCGAAAAGAGAAGTGGTTTAGGGTATTTTCCGGAATGGATTTATAATTTGATAGAACAAGGGGATGATTTGAGCGAACATATTGAGGTTGAGAAATATGCGAAAATAGCGAAGAAACTTGCGATTGCAGGACTTTGGTGTATTCAATGGCACCCGGTCGATCGTCCTTCTATGCAAGTTGTAGTTCATATGTTGGAAGGAGATGGAGAGAAGTTAAGTATGCCACCAAATCCATTTGCTTCTGCTGATCCTGCTATAATGAATGCGAGTTTAATTGGAAGGCACCTTCATAGAGAGTGA 1791 0.3596 MWCKYYSTLVFPFFCFFLSVNYYTTLASANSECLKTRCNHKDAPSPTIQYPFRLQNIQSQNCGKIGFDISCNKNHQTILELPNSINFVVNKIDYKSQKIHVTNPNGCLPKLLSNLNITSTPFHFFDYSNSNYTLFNCSSMNTALQSHYSSIKCLSSHGYQVYALNSTLRIKDVTLTYCTKLYDMSFVPKDVVFSNGVDLVLGWDTSCSNGSKIEHDCYNIVNESNGGKKKEQILVPILSCLGILLLVTILYHVRYRTQKEENEARIEKFLEDYRALKPTRYSYSDIKRITNNFKNELGQGAYGTVYKGKLSGDIYVAVKLLKTSTGNGPEFINEVGTMSQIHHVNVVHLVGFCADGHTRALVYEYLPNGSLQKFISTTDFKNHFLSWEKLQEIALGIAKGIEYLHQGCDQRILHFDIKPHNILLDNNFTPKISDFGLAKLCSKDQSAVSMTAARGTIGYIAPEVFSRNFGNVSYKSDVYSFGMLLLEMVGGRQNADVVEKRSGLGYFPEWIYNLIEQGDDLSEHIEVEKYAKIAKKLAIAGLWCIQWHPVDRPSMQVVVHMLEGDGEKLSMPPNPFASADPAIMNASLIGRHLHRE* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3126 596 PANTHER RECEPTOR-LIKE KINASE 28 589 - -
Tpr1g3126 596 ProSiteProfiles Protein kinase domain profile. 291 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3126 596 SUPERFAMILY Protein kinase-like (PK-like) 274 563 IPR011009 -
Tpr1g3126 596 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Tpr1g3126 596 SMART serkin_6 291 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3126 596 PANTHER RUST RESISTANCE KINASE LR10-RELATED 28 589 IPR045874 GO:0004672
Tpr1g3126 596 Gene3D Transferase(Phosphotransferase) domain 1 366 571 - -
Tpr1g3126 596 Gene3D Phosphorylase Kinase; domain 1 264 365 - -
Tpr1g3126 596 ProSitePatterns Protein kinases ATP-binding region signature. 297 319 IPR017441 GO:0005524
Tpr1g3126 596 Pfam Wall-associated receptor kinase galacturonan-binding 38 102 IPR025287 GO:0030247
Tpr1g3126 596 Pfam Protein tyrosine and serine/threonine kinase 293 562 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3126 Tpr-Chr1 35741813 35744327 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3126 230 582 Receptor kinase-like Gene Family AT1G66910 47.934 1.98e-111 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Tpr1g3126 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3126 - - zju:107414589 662.914