Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3125 ATGAAAGACACGAAACGACACTCGTCGGAATCGACTCTCCGACGTGTGGATTCTGTTGAGGCAGTTACGAAATTGGAGAATGTTCACCGGAGGAGGTTGAAAATCCGGAGAATGAAGTATAGTTGTCAAACGAAGATCCACGTCGGAAATGACACCGGCAGTGGTACGGTGACGGAGAATGAGCGACGAGAGATTCATGAATCGGTTGAGATATCGCTATCTTTAGCAACTTCCTCATCATCGGAGGAGGAAGATCGGAGCTCAAAGCGAAATGGATCAGAAGTTCTATCGTACGGTTCGGTGTCTACGATAGGCACTAGGAAGGAAATGGAGGATGCGGTGAGTGTGGAGATAGGTTTTGCGGTTAAGGATAGTGAGAAGTGTGATTTTTTCGGTGTTTATGACGGTCACGGCGGAGCTCAGGTTGCAGAGGCGTGTAAGGAGAGGTTTCATCAGGTTGTGGCGGAGGAGGTGGAGAGATGTGGGAAGGATGATGAATGGGATTGGGAAAGAGTGATGGAAGGGTGTTTTGGTAAAATGGATAGTGAGGTGGCAGGTGATGCAGCTGTTAGGACTGTGGGGTCCACTGCTGTTGTGGCAGTTGTTTCCACGACCGAGATTGTTGTCGCAAATTGTGGCGATTCTAGAGCGGTTATGGGAAGAGCCGGCGAAGCTGTGGACTTGTCTACTGATCATAAACCGGACAGGCCTGATGAGTTGATGCGCATAGAAGAAGTTGGTGGAAGGGTCATAAACTGGAATGGCCATCGTGTTCTTGGCGTTCTTGCCACTTCCCGATCTATAGGAGATCAATATCTTCGACCATATGTAATATCGAAACCTGAAGTCACTGTGACAAAGCGAACCATCGATGATGAATTTCTCATACTAGCAAGTGATGGCTTGTGGGGTGTCATATCTAGTGAACTTGCTTGCCAAATTGCAAGAAAATGCTTCAAAGGCCAAATTAGGAGAGTTTGTCATGGGGTTGGTAATCAAAGTAGTCGTGCTGCTGAAGCTGCAACACTATTATCTGAGATAGCATTGGCAAAGGGTAGCAGAGACAATACCAGTGTCATAGTAGTTGACCTAAGAGGAACATTAACATCTAGTTGA 1116 0.4695 MKDTKRHSSESTLRRVDSVEAVTKLENVHRRRLKIRRMKYSCQTKIHVGNDTGSGTVTENERREIHESVEISLSLATSSSSEEEDRSSKRNGSEVLSYGSVSTIGTRKEMEDAVSVEIGFAVKDSEKCDFFGVYDGHGGAQVAEACKERFHQVVAEEVERCGKDDEWDWERVMEGCFGKMDSEVAGDAAVRTVGSTAVVAVVSTTEIVVANCGDSRAVMGRAGEAVDLSTDHKPDRPDELMRIEEVGGRVINWNGHRVLGVLATSRSIGDQYLRPYVISKPEVTVTKRTIDDEFLILASDGLWGVISSELACQIARKCFKGQIRRVCHGVGNQSSRAAEAATLLSEIALAKGSRDNTSVIVVDLRGTLTSS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3125 371 ProSitePatterns PPM-type phosphatase domain signature. 130 138 IPR000222 GO:0043169
Tpr1g3125 371 CDD PP2Cc 97 364 IPR001932 -
Tpr1g3125 371 Gene3D - 91 367 IPR036457 -
Tpr1g3125 371 SMART PP2C_4 87 362 IPR001932 -
Tpr1g3125 371 ProSiteProfiles PPM-type phosphatase domain profile. 97 364 IPR001932 -
Tpr1g3125 371 SUPERFAMILY PP2C-like 94 365 IPR036457 -
Tpr1g3125 371 PANTHER PROTEIN PHOSPHATASE 2C 51-RELATED 39 367 - -
Tpr1g3125 371 MobiDBLite consensus disorder prediction 70 95 - -
Tpr1g3125 371 PANTHER ALPHABET, ISOFORM E-RELATED 39 367 - -
Tpr1g3125 371 Pfam Protein phosphatase 2C 98 357 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3125 Tpr-Chr1 35724642 35732585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3125 59 365 PP2C-type Phosphatase Gene Family AT2G29380 49.846 6.33e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3125 K14497 - gmx:100807235 489.189