Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3101 ATGGCATTAGAAGTCCTTGAGGCTCTTGATTCAGCTCGTACACAATGGTACCATGTAACAGCCATAGTAATTGCAGGAATGGGATTCTTCACCGATGCTTACGATCTCTTTTGCATTACAACCGTTTCAAAGCTCTTAGGACGACTATATTACTTTGATCCAAGCAATGGCAAACCGGGGAAGCTCCCACCAACAGTTAACAACTTTGTCACCGGTGTGGCCCTAGTCGGGACACTTTGTGGCCAATTATTTTTTGGCTACCTTGGAGACAAACTAGGACGCAAAAAAGTCTATGGCATCACACTTATTCTCATGGTCGCTTGTGCCCTTTGCTCCGGCCTTTCCTTTGGTTCATCACCAAAATCTGTTATGACAACCCTTTGTTTTTTCAGGTTCTTGCTTGGATTTGGTATTGGTGGAGACTACCCTTTATCTGCAACTATCATGTCAGAATACGCCAACAAAAGGACGCGTGGCGCATTCATAGCAGCTGTTTTCGCGATGCAAGGCATGGGAATTATCTTCGCAGGGTTGGTTTCAATGCTCTTTTCAGCTGTTTTCAAAGCATATTACCAAGCTCCAATTTTCTCTAAAGACCCAATTGTGTCAACACAACCCGAAGGTGATTTATTGTGGCGATTAGTTCTCATGATTGGTGCTATTCCGGCTGCTATGACTTACTATTGGAGAATGAAAATGCCTGAAACTGGTCGTTATACTGCAATCGTAGAAGGGAACGCGAAACAAGCTGCAGCAGACATGGCAAGAGTTTTAGACATTGAAATTATAGCTGAGCAGGATAAGTTGGCTGAATTTAAAGCCGCGAATAATTACACTCTTGGCTCGCGCGAGTTTTTTGACAGACATGGCCGTCATTTGATTGGTACTATGAGTTGTTGGTTCTTATTAGATATTGCTTTCTACAGTCAGAACTTAACACAAAAAGATATTTACCCTGCAATGGGACTAATTGATAAAGATACCGCCATGAATGCTATTGATGAAGTTTTTCAAACCTCGCGTGCCATGTTTGTTGTCGCCTTGTTTGGAACTTTCCCCGGTTATTGGTTCACTGTTTTCTTCATTGAAAAAATGGGACGACACAAGATCCAACTCATTGGTTTCTTCATGATGTCTTTCTTTATGTTTATTATTGGTATCAAATATGATTATTTGAAAGACGAAAACAAGAACCTATTCGCTCTTTTATATGGGCTAACATTCTTCTTCGCGAACTTTGGGCCTAATAGTACAACATTTGTCTTGCCGGCTGAGCTGTTTCCAACGCGGGTGAGATCCACCTGTCATGCTCTCAGCGCGGCGGCAGGGAAGGCTGGGGCTATGGTTGGTGCATTTGGGATACAGTCCTACACATTGGACGGTACCACGAAGAAGATTAAAAAAGCAATGATGATTTTGGCCTTCACTAATTTGTTAGGATTCTTCTGCTCATTCTTGGTCACGGAAACTAAGGGACGATCGTTGGAAGAGATTTCGGGTGAGGATGGGAGAGAAAGTGAACTCACTGCAACACCAAATGATAGGGTTTCTGGGGCTCATCAAGAATCAAGAACAGAGAAGATGTAA 1587 0.4272 MALEVLEALDSARTQWYHVTAIVIAGMGFFTDAYDLFCITTVSKLLGRLYYFDPSNGKPGKLPPTVNNFVTGVALVGTLCGQLFFGYLGDKLGRKKVYGITLILMVACALCSGLSFGSSPKSVMTTLCFFRFLLGFGIGGDYPLSATIMSEYANKRTRGAFIAAVFAMQGMGIIFAGLVSMLFSAVFKAYYQAPIFSKDPIVSTQPEGDLLWRLVLMIGAIPAAMTYYWRMKMPETGRYTAIVEGNAKQAAADMARVLDIEIIAEQDKLAEFKAANNYTLGSREFFDRHGRHLIGTMSCWFLLDIAFYSQNLTQKDIYPAMGLIDKDTAMNAIDEVFQTSRAMFVVALFGTFPGYWFTVFFIEKMGRHKIQLIGFFMMSFFMFIIGIKYDYLKDENKNLFALLYGLTFFFANFGPNSTTFVLPAELFPTRVRSTCHALSAAAGKAGAMVGAFGIQSYTLDGTTKKIKKAMMILAFTNLLGFFCSFLVTETKGRSLEEISGEDGRESELTATPNDRVSGAHQESRTEKM* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3101 528 SUPERFAMILY MFS general substrate transporter 8 499 IPR036259 -
Tpr1g3101 528 TIGRFAM 2A0109: phosphate:H+ symporter 6 501 IPR004738 GO:0005315|GO:0006817|GO:0016021
Tpr1g3101 528 Pfam Sugar (and other) transporter 22 499 IPR005828 GO:0016021|GO:0022857|GO:0055085
Tpr1g3101 528 Gene3D MFS general substrate transporter like domains 17 515 IPR036259 -
Tpr1g3101 528 CDD MFS_PhT 22 491 - -
Tpr1g3101 528 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 2 509 - -
Tpr1g3101 528 MobiDBLite consensus disorder prediction 497 528 - -
Tpr1g3101 528 ProSitePatterns Sugar transport proteins signature 2. 133 158 IPR005829 GO:0016021|GO:0022857|GO:0055085
Tpr1g3101 528 ProSiteProfiles Major facilitator superfamily (MFS) profile. 21 492 IPR020846 GO:0022857
Tpr1g3101 528 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-11 2 509 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3101 Tpr-Chr1 35503477 35505754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3101 3 507 Inorganic Solute Cotransporters AT3G54700 60.659 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3101 K08176 - gmx:100805284 874.004