Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3098 | ATGAAAAACAAAATGGCCCTTTTGTTCCTTTATTCAACAACTTTCATGATTGGAGCAATGTTCTTATTTTCTGTTGAAGCTGAACCAGTAGCAGATAAACAAGCTTTACTTGATTTCCTTCACAATATGAACCATTCCACACATCTCAATTGGAACAAGAATTCTTCTGTATGCAAAAAATGGAATAGAGTTATCTGCAACAAAGAACAATCAAGAGTTATATCTCTTCAACTACAAAGTGTTGGATTGAATGGTTCAATTCCACCAAACACACTTAGTAGACTCTCAGCACTTCAAAATTTGAGTCTTGCATCAAATACTATAACTGGTTTTTTTCCTTCTAGTTTCAATAAGCTGAAAAATTTGACTTTTGTTTCTATACAATTTAACAAGTTTTATGGTTCATTGCCATTAGATTTTTCTGTTTGGAAGAATCTAACTTTTGTTGATTTTTCTAACAATGGTTTTAATGGTAGCATCCCTTTATCAGTTTCAAATTTGACTCATCTTAGTTCTTTGATTCTAGCTAATAACACTCTTTCTGGTGAAATTCCTGATATTAATATTCCTAGTCTCAAAGATCTTAATTTGGAAAACAATAATCTTAGTGGTTTTGTTCCTAAATCACTTTCTAGATTTCCAAGTTTGTCTTTTTCAGGTAACAATCTTACATATGTTGATGTAAATGTTTCTTATCCTACAAATGTTCATAAAAAAAGGAAGAAAAATAAAGGACTTAAAGAACCGGCATTATTAGGTATCATAATCGGTGGTTCGGTGTTAGGATTTTTATTCATAGGAGTTTTCTTGATTGTATGTTACTATGAGAAACGCGGCAAAGATGGACAAATTATTAAGTCTCAGAAGAGTAAAGAAGTTTTTTCAGAGAAAAAAGAAGCTTCTGATAGTCTAGAACGAAACAAAATCGTTTTCTTTGAAGGTTGTAATCTTGTATTTGACTTAGAAGATTTGTTGAGAGCTTCTGCTGAGGTGCTTGGGAAAGGAACATTTGGTACTGTATATAAGGCTTCTTTAGAGGATGCAACAACGGTCGCGGTTAAGAGGTTAAAGGAGGTTATGGTTGGGAAGCGCGAATTCGAACAGCAGATGGAGATTGTGGGAAGGATTAGGCATGAGAATGTGGTTTCATTAAGGGCTTATTACTATTCAAAGGAGGAGAAACTTATGGTTTATGATTATTATGAACAAGGCAGTGTCTCAGCAATGTTACATGGCAAAAGAGGGGCAGAGAGGATTCCTTTAAATTGGGAAAGTAGGTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGAAGAAAAACTAATCCATGGAAACATAAAAGCTTCAAACATCTTCCTCAACTCTAAAGGATATGGTTGTATATCTGACATTGGTCTAGCAACAATGATAATAAGTCCAATATCACCAAGAGCAAGAGGATACCTTGCATCGGAAGTAACCGAAACTCGAAAAGCAACGTATGCATCCGATGTCTATAGTTTCGGTGTCTTATTACTTGAACTTTTAACTGGAAAATCTCCCTTACATGGAGGTGAGGAAGTTGTTCATTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAAGAGTGGACTTCTGAAGTGTTTGATTTGGAATTATTGAGATATCCTAATATAGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGTGAGGTTACAAGATGATAGACCAAAAATGGATGAAGTTGTGACAATGGTTGAGGAAATTCATAGGGGTAATAGTGGAAATAGACCTTCATCTGAATTTAGGTCAGAATGTTCTACTCCAACTCCTCATGTGATTGAGACACCAACTTCTCTAGATTGA | 1866 | 0.3494 | MKNKMALLFLYSTTFMIGAMFLFSVEAEPVADKQALLDFLHNMNHSTHLNWNKNSSVCKKWNRVICNKEQSRVISLQLQSVGLNGSIPPNTLSRLSALQNLSLASNTITGFFPSSFNKLKNLTFVSIQFNKFYGSLPLDFSVWKNLTFVDFSNNGFNGSIPLSVSNLTHLSSLILANNTLSGEIPDINIPSLKDLNLENNNLSGFVPKSLSRFPSLSFSGNNLTYVDVNVSYPTNVHKKRKKNKGLKEPALLGIIIGGSVLGFLFIGVFLIVCYYEKRGKDGQIIKSQKSKEVFSEKKEASDSLERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKASLEDATTVAVKRLKEVMVGKREFEQQMEIVGRIRHENVVSLRAYYYSKEEKLMVYDYYEQGSVSAMLHGKRGAERIPLNWESRLKIAIGVARGIAHIHEEKLIHGNIKASNIFLNSKGYGCISDIGLATMIISPISPRARGYLASEVTETRKATYASDVYSFGVLLLELLTGKSPLHGGEEVVHLVRWVNSVVREEWTSEVFDLELLRYPNIEEMVEMLQIGMACVVRLQDDRPKMDEVVTMVEEIHRGNSGNRPSSEFRSECSTPTPHVIETPTSLD* | 622 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3098 | 621 | SUPERFAMILY | Protein kinase-like (PK-like) | 330 | 591 | IPR011009 | - | |
Tpr1g3098 | 621 | Pfam | Leucine rich repeat N-terminal domain | 31 | 67 | IPR013210 | - | |
Tpr1g3098 | 621 | MobiDBLite | consensus disorder prediction | 593 | 621 | - | - | |
Tpr1g3098 | 621 | PANTHER | OS05G0588300 PROTEIN | 17 | 615 | - | - | |
Tpr1g3098 | 621 | ProSitePatterns | Protein kinases ATP-binding region signature. | 332 | 363 | IPR017441 | GO:0005524 | |
Tpr1g3098 | 621 | Gene3D | Ribonuclease Inhibitor | 31 | 138 | IPR032675 | - | |
Tpr1g3098 | 621 | PANTHER | LRR RECEPTOR-LIKE KINASE | 17 | 615 | - | - | |
Tpr1g3098 | 621 | SUPERFAMILY | L domain-like | 51 | 226 | - | - | |
Tpr1g3098 | 621 | Gene3D | Ribonuclease Inhibitor | 139 | 247 | IPR032675 | - | |
Tpr1g3098 | 621 | Gene3D | Transferase(Phosphotransferase) domain 1 | 401 | 605 | - | - | |
Tpr1g3098 | 621 | MobiDBLite | consensus disorder prediction | 590 | 621 | - | - | |
Tpr1g3098 | 621 | ProSiteProfiles | Protein kinase domain profile. | 326 | 589 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3098 | 621 | Pfam | Protein tyrosine and serine/threonine kinase | 330 | 584 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g3098 | 621 | Gene3D | Phosphorylase Kinase; domain 1 | 290 | 400 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3098 | Tpr-Chr1 | 35480341 | 35484150 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3098 | 21 | 610 | Receptor kinase-like Gene Family | AT4G23740 | 55.161 | 0.0 | 646 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-III | Tpr1g3098 | PK_Tyr_Ser-Thr | 3.8e-38 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3098 | - | - | aprc:113851984 | 836.639 |