Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3098 ATGAAAAACAAAATGGCCCTTTTGTTCCTTTATTCAACAACTTTCATGATTGGAGCAATGTTCTTATTTTCTGTTGAAGCTGAACCAGTAGCAGATAAACAAGCTTTACTTGATTTCCTTCACAATATGAACCATTCCACACATCTCAATTGGAACAAGAATTCTTCTGTATGCAAAAAATGGAATAGAGTTATCTGCAACAAAGAACAATCAAGAGTTATATCTCTTCAACTACAAAGTGTTGGATTGAATGGTTCAATTCCACCAAACACACTTAGTAGACTCTCAGCACTTCAAAATTTGAGTCTTGCATCAAATACTATAACTGGTTTTTTTCCTTCTAGTTTCAATAAGCTGAAAAATTTGACTTTTGTTTCTATACAATTTAACAAGTTTTATGGTTCATTGCCATTAGATTTTTCTGTTTGGAAGAATCTAACTTTTGTTGATTTTTCTAACAATGGTTTTAATGGTAGCATCCCTTTATCAGTTTCAAATTTGACTCATCTTAGTTCTTTGATTCTAGCTAATAACACTCTTTCTGGTGAAATTCCTGATATTAATATTCCTAGTCTCAAAGATCTTAATTTGGAAAACAATAATCTTAGTGGTTTTGTTCCTAAATCACTTTCTAGATTTCCAAGTTTGTCTTTTTCAGGTAACAATCTTACATATGTTGATGTAAATGTTTCTTATCCTACAAATGTTCATAAAAAAAGGAAGAAAAATAAAGGACTTAAAGAACCGGCATTATTAGGTATCATAATCGGTGGTTCGGTGTTAGGATTTTTATTCATAGGAGTTTTCTTGATTGTATGTTACTATGAGAAACGCGGCAAAGATGGACAAATTATTAAGTCTCAGAAGAGTAAAGAAGTTTTTTCAGAGAAAAAAGAAGCTTCTGATAGTCTAGAACGAAACAAAATCGTTTTCTTTGAAGGTTGTAATCTTGTATTTGACTTAGAAGATTTGTTGAGAGCTTCTGCTGAGGTGCTTGGGAAAGGAACATTTGGTACTGTATATAAGGCTTCTTTAGAGGATGCAACAACGGTCGCGGTTAAGAGGTTAAAGGAGGTTATGGTTGGGAAGCGCGAATTCGAACAGCAGATGGAGATTGTGGGAAGGATTAGGCATGAGAATGTGGTTTCATTAAGGGCTTATTACTATTCAAAGGAGGAGAAACTTATGGTTTATGATTATTATGAACAAGGCAGTGTCTCAGCAATGTTACATGGCAAAAGAGGGGCAGAGAGGATTCCTTTAAATTGGGAAAGTAGGTTGAAAATAGCAATTGGTGTAGCAAGAGGCATTGCTCACATCCATGAAGAAAAACTAATCCATGGAAACATAAAAGCTTCAAACATCTTCCTCAACTCTAAAGGATATGGTTGTATATCTGACATTGGTCTAGCAACAATGATAATAAGTCCAATATCACCAAGAGCAAGAGGATACCTTGCATCGGAAGTAACCGAAACTCGAAAAGCAACGTATGCATCCGATGTCTATAGTTTCGGTGTCTTATTACTTGAACTTTTAACTGGAAAATCTCCCTTACATGGAGGTGAGGAAGTTGTTCATTTGGTTAGATGGGTGAATTCTGTGGTTAGAGAAGAGTGGACTTCTGAAGTGTTTGATTTGGAATTATTGAGATATCCTAATATAGAAGAAATGGTTGAGATGTTACAAATTGGTATGGCTTGTGTTGTGAGGTTACAAGATGATAGACCAAAAATGGATGAAGTTGTGACAATGGTTGAGGAAATTCATAGGGGTAATAGTGGAAATAGACCTTCATCTGAATTTAGGTCAGAATGTTCTACTCCAACTCCTCATGTGATTGAGACACCAACTTCTCTAGATTGA 1866 0.3494 MKNKMALLFLYSTTFMIGAMFLFSVEAEPVADKQALLDFLHNMNHSTHLNWNKNSSVCKKWNRVICNKEQSRVISLQLQSVGLNGSIPPNTLSRLSALQNLSLASNTITGFFPSSFNKLKNLTFVSIQFNKFYGSLPLDFSVWKNLTFVDFSNNGFNGSIPLSVSNLTHLSSLILANNTLSGEIPDINIPSLKDLNLENNNLSGFVPKSLSRFPSLSFSGNNLTYVDVNVSYPTNVHKKRKKNKGLKEPALLGIIIGGSVLGFLFIGVFLIVCYYEKRGKDGQIIKSQKSKEVFSEKKEASDSLERNKIVFFEGCNLVFDLEDLLRASAEVLGKGTFGTVYKASLEDATTVAVKRLKEVMVGKREFEQQMEIVGRIRHENVVSLRAYYYSKEEKLMVYDYYEQGSVSAMLHGKRGAERIPLNWESRLKIAIGVARGIAHIHEEKLIHGNIKASNIFLNSKGYGCISDIGLATMIISPISPRARGYLASEVTETRKATYASDVYSFGVLLLELLTGKSPLHGGEEVVHLVRWVNSVVREEWTSEVFDLELLRYPNIEEMVEMLQIGMACVVRLQDDRPKMDEVVTMVEEIHRGNSGNRPSSEFRSECSTPTPHVIETPTSLD* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3098 621 SUPERFAMILY Protein kinase-like (PK-like) 330 591 IPR011009 -
Tpr1g3098 621 Pfam Leucine rich repeat N-terminal domain 31 67 IPR013210 -
Tpr1g3098 621 MobiDBLite consensus disorder prediction 593 621 - -
Tpr1g3098 621 PANTHER OS05G0588300 PROTEIN 17 615 - -
Tpr1g3098 621 ProSitePatterns Protein kinases ATP-binding region signature. 332 363 IPR017441 GO:0005524
Tpr1g3098 621 Gene3D Ribonuclease Inhibitor 31 138 IPR032675 -
Tpr1g3098 621 PANTHER LRR RECEPTOR-LIKE KINASE 17 615 - -
Tpr1g3098 621 SUPERFAMILY L domain-like 51 226 - -
Tpr1g3098 621 Gene3D Ribonuclease Inhibitor 139 247 IPR032675 -
Tpr1g3098 621 Gene3D Transferase(Phosphotransferase) domain 1 401 605 - -
Tpr1g3098 621 MobiDBLite consensus disorder prediction 590 621 - -
Tpr1g3098 621 ProSiteProfiles Protein kinase domain profile. 326 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3098 621 Pfam Protein tyrosine and serine/threonine kinase 330 584 IPR001245 GO:0004672|GO:0006468
Tpr1g3098 621 Gene3D Phosphorylase Kinase; domain 1 290 400 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3098 Tpr-Chr1 35480341 35484150 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3098 21 610 Receptor kinase-like Gene Family AT4G23740 55.161 0.0 646
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr1g3098 PK_Tyr_Ser-Thr 3.8e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3098 - - aprc:113851984 836.639