Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3087 ATGGTGCCTCCGGGGCCGCCGAATCCGATTGGTGGTGCCCCATCTTTGACGCCTTCGCTTATGAGAACGAATTCAGGGATGATGGGTGGTCAAGGAGGACAAGCTTCTTTTCCTTCGTTGGTTTCACAGCGAAATCAGTTTAATAACATGAATATGTTGGGCAATATGTCTAATGTTGCTTCCATGATGAATCAGTCTTTTCCCAATGGGATTCCGAACTCGGGGATCGGTGGATTGGGAAATGGTCAGCGGGGTGGTATGGATGCTGGGGCTGAACAGGACCCTTTGTCTGGTGTTGCTAATGGAATGGGATTTGGTAATCCTTCGTCGTCGTTTGGGCAAGCTAATGTTGTTAACCCTGGTTCGTCTGGTCAAGGCCAAGGTCAGGGTCAGCAATTTTCAAACCCTTCTGGCAACCAGTTGTTGTCGGATCAACAACATTCACAACAACATGAAGTTCAAAATTTCCAACATAATCAGCAACAGTCAGCGCAGCAGTTTTCGGCTCCAATGAACACTCAACAACAACAACAACAACATCAGCAACAGCAGCATTTCCAATCAATGCGAGGAGGGATAGGTGGTATTGGACCGGTGAAGATGGAGCCACAGGTAAACAGCGATCAGTTTGGGCAGCAGCAGCAGTTGTCATCGCTGAGGAATCTTGCTCAGGTAAAATTAGAACCGCAACAACTTCAATCAATGAGAGGTATGGCTACTGTAAAAATGGAACCCCAGCATAGTGATCAGCCGTTTTTACATCAACAACAACAACAACAGCAGCAGCAACAACAACAACAACTTCTCCATATGTCAAGGCAAACCTCCCAGGCTACTGCTGCACAGATGAACCTTTTGCAACAACAGAGACTTTTGCAATATCAACAGCAGCAGCAACATCAGCAGCAACAACTCTTAAAATCGATGCCTCCGCAGCAACGGTCCCAGCTACCGCAGCAGTTTCAACAGCAGAATATGCCTGTAAGGTCTCCTGTGAAACCAGCATATGAACCTGGGATGTGTGCTAGACGGCTGACACATTACATGTATCAGCAACAACATAGACCTGAAGATAACAACATCGATTTCTGGAGGAAATTTGTTGCCGAGTATTTTGCCCCTAATGCCAAAAAGAAGTGGTGTGTTTCCATGTATGGAAGTGGCAGACAAACAACTGGAGTTTTCCCTCAGGATATATGGCACTGTGAAATATGTAATCGCAAACCGGGCCGTGGGTTTGAGGCAACGGCTGAGGTTCTTCCCAGGCTTTTCAAAATAAAGTATGAAAGTGGTACTTTAGAAGAGCTACTGTATGTTGACATGCCTCGTGAATATCATAATTCCTCTGGCCAAATTGTTCTAGATTATGCAAAAGCAATTCAAGAAAGTGTTTTTGAGCAACTTCGCGTTGTTCGTGATGGTCAACTTCGAATAGTTTTCTCTCCAGACCTGAAGATATGCTCTTGGGAGTTTTGCGCTCGGCGACATGAAGAGCTTATCCCCAAAAGATTGTTAATACCTCAGGTTAGTCAGCTTGGAGCAGTTGCTCAGAAATATCAGTCATGTACTCAAAATGCAGCAACCAATCTATCCGTTCCAGAGTTACAAAATAATTGCAATATGTTTGTTGCATCAGCCCGTCAACTGGCAAAAGCTTTAGAAGTTCCATTGGTTAATGATTTAGGATATACAAAGAGATATGTGCGGTGCCTACAAATATCAGAAGTAGTAAATAGTATGAAAGACTTGATAGATTATAGCAGAGAAACAGGGACTGGACCTATGGACAGCTTAGCCAAATTCCCTCGGAGAACAAGTAATTCATCTGCACTTCATAGTCAGGCGCAACAGTCTGACGATCAATTACAGCAGCAACAACAGCATATGGTGGCCCATAACTCAAATGGTGACCAAAACTCTGTGCAAAATGCTGCCATGCAAATTCCTTCTAACAATGGTGTGGCAAATGTAAATAACAGTGTCAGCTCAGCACCTGCGTCGACCACCACAAGCACCATTGTTGGGCTTCTGCACCAGAACTCTATGAATGCTAGACAGCAAAATTCAATGAACAATGCAAGCAGTCCATATGGAGGTGGTTCTGCGCATATTCCATCCCCAGGTTCTTGCAATACAGTGCCACAAGCACAACCAAACTCGTCCCCTTTTCATTCACCAACACCGTCCTCGTCTAACAACCCACAAACTTCTCACCCGGGCATAACATCTGCAAATCACATGAGTACAGCAAACTCGCCGGCTAATATTTCCTTGCAACAACAGCAGACATCAATATCTGGTGATGCTGACCCTAGTAACGATGCTCAGAACTCCATGCATAAAATCATTCACGATATGATGATGTCCTCCCAGATGAACGGAACAGGTGGAATGGTAGGCGCTAATTCTCTCGGAAATGACATGAAGAATGTAAATGGCATCCTACCAGTGAGTACTAATACAGGCCTCAACGGTGGCAATGGCATGATGGTTAATGGAGGCGTGAACAGTAATTCTGGTGTTGGGGTTGGTGGTTATGGCACAATGGGTCTTGGTCCATCTGGTTTACCGAATGGCATGAGACCTGGAATGGGAAATAATTCAGTCATGAATGGAAGGGGAGGAATGGCGTCTATGGCTCGGGAACAGGCAATGAATCATCAACAGGATTTGTCAAGCCAACTACTCAGTGGATTAGGAGCAGTAAATGGTTTTAATAATCTTCAATTTGATTAA 2736 0.4474 MVPPGPPNPIGGAPSLTPSLMRTNSGMMGGQGGQASFPSLVSQRNQFNNMNMLGNMSNVASMMNQSFPNGIPNSGIGGLGNGQRGGMDAGAEQDPLSGVANGMGFGNPSSSFGQANVVNPGSSGQGQGQGQQFSNPSGNQLLSDQQHSQQHEVQNFQHNQQQSAQQFSAPMNTQQQQQQHQQQQHFQSMRGGIGGIGPVKMEPQVNSDQFGQQQQLSSLRNLAQVKLEPQQLQSMRGMATVKMEPQHSDQPFLHQQQQQQQQQQQQQLLHMSRQTSQATAAQMNLLQQQRLLQYQQQQQHQQQQLLKSMPPQQRSQLPQQFQQQNMPVRSPVKPAYEPGMCARRLTHYMYQQQHRPEDNNIDFWRKFVAEYFAPNAKKKWCVSMYGSGRQTTGVFPQDIWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTLEELLYVDMPREYHNSSGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPKRLLIPQVSQLGAVAQKYQSCTQNAATNLSVPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSRETGTGPMDSLAKFPRRTSNSSALHSQAQQSDDQLQQQQQHMVAHNSNGDQNSVQNAAMQIPSNNGVANVNNSVSSAPASTTTSTIVGLLHQNSMNARQQNSMNNASSPYGGGSAHIPSPGSCNTVPQAQPNSSPFHSPTPSSSNNPQTSHPGITSANHMSTANSPANISLQQQQTSISGDADPSNDAQNSMHKIIHDMMMSSQMNGTGGMVGANSLGNDMKNVNGILPVSTNTGLNGGNGMMVNGGVNSNSGVGVGGYGTMGLGPSGLPNGMRPGMGNNSVMNGRGGMASMAREQAMNHQQDLSSQLLSGLGAVNGFNNLQFD* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3087 911 MobiDBLite consensus disorder prediction 243 275 - -
Tpr1g3087 911 MobiDBLite consensus disorder prediction 249 275 - -
Tpr1g3087 911 MobiDBLite consensus disorder prediction 708 737 - -
Tpr1g3087 911 MobiDBLite consensus disorder prediction 140 187 - -
Tpr1g3087 911 MobiDBLite consensus disorder prediction 302 329 - -
Tpr1g3087 911 PANTHER LIM DOMAIN-BINDING PROTEIN 1 911 IPR029005 -
Tpr1g3087 911 Pfam LIM-domain binding protein 344 598 IPR029005 -
Tpr1g3087 911 MobiDBLite consensus disorder prediction 603 633 - -
Tpr1g3087 911 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 1 911 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3087 Tpr-Chr1 35386235 35394674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3087 1 815 C2H2 Transcription Factor Family AT1G43850 59.281 0.0 738