Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3084 ATGTCATTGATTATATCTCCGGAGTTGGCCGATGCATCATACAGAAATGCGAAGCTATACTCGTTAAAGGGAACCGATGTTACACCTGGCTTGTCCTCTCATAATTTTGCACCTGATAAGCACAGAAACATGTACATGAACGATTCTTACTCGAGTGAGAGTTATGAAAAATACTTCCTTGATTCACCGACAGAAGAACTGATAGAACCATCTAGTTCTGGCATATCAGGAAATTCTGTTCACGCTGATAGTGATTCTTCTTACCAGCTCAGGGCTAATTCTGGAGGTTCTATGGTCACTGATAACCCATTTGATACTTATGTATCGTCTACAAGGAAAAGGGATGCTTATCAGTCAAACTTTGAATCAGATTTATTTGAAAATGAGAGCCCAGATTGCTTTGAATTTGATGGTGAAATGCGATTGAAACTACAAGAATTGGAGAGGGCATTGCTTGGTGACAATAATGATGATTGCGATGATGATGGAGAAAACATATTTAGGACTGTTCAGAGCATGGATATTGATCCTGACTTTGCCGAGTGCGCCAATCCTGCTCAGAAAATGTCACTTCACGACTCTCCAAAGGAATCTTTGTCATCAGATTCCAATCTTAGTTGTAGCAGCAGCTGCAAAGAAATATCGCAAAAATCTCCTCGGACCCCGAAGCAGTTACTCTATGAATGTGCTAGTGCACTTTCAGAAGGAAATGAAGTAAAAGCCTCAGCTATGATAGACGATCTCAGGCAGATGGTTTCGATTCAGGGAGATCCTTCCACAAGAATTGCAGCCTACATGGTGGAAGGACTTGCAGCTCGTTTGGCTTCGTCCGGAAAATCTATTTATAAAGCTTTGAGATGCAAGGAACCTCCTACATCCGATCGTCTAGCAGCAATGCAGATACTATTCGAGGTGTGCCCGTGTTTTAAATTTGGATTCATTGCTGCAAATGGTGCTATTGCCGAGGCTATTAAAGATGATAAGAAGGTTCACATAATAGATTTTGATATCAACCAAGGAAGTCAATATATAACCCTAATACAAACACTTGCTTCTAGGCCAGGGAAGCCGCCTTTTGTGAGATTGACCGGCGTTGATGATCCTGAATCAGTGCAGCGATCTGTTGGAGGCCTAAGTATTATAGGACAGAGACTTGAAAAGCTAGCAGAAGTACTCGGATTGCCATTTGAATTCCGTGCTGTAGCGTCAAGTTCTTCAGTTGTTACTCCATCAATGCTCAACTGTCGACCCGGGGAAGCAATTGTGGTGAACTTCGCATTCCAGCTTCATCACATGCGCGACGAAAGTGTATCAACAGTAAATGAGCGAGACCAGCTTCTTCGCATGGTTAAGAGCCTTAATCCAAAACTTGTAACAGTTGTGGAACAAGACGTAAACACCAACACTTCTCCATTTCTACCAAGATTTGTTGAAGCCTACAATTACTACTCTGCCGTGTTTGAGTCGCTCGACGCCACTCTTCCGAGAGAGAGTCAGGATAGGGTGAATGTTGAAAGGCAATGCTTGGCAAGGGACATTGTCAATATCATTGCGTGCGAGGGCGAGGATAGAATTGAACGGTATGAAGTCGCAGGAAAATGGAGGGCAAGGTTGAAAATGGCCGGATTTACTTCATCGCCGATGAGTGAAAATGTGGAAGAAGCAATTAAGGAACTCATTAGGCAGTATTGTGACAAATACAAGATAAAACAAGAAATGGGGGCTCTTCATTTTGGATGGGAAGACAAAAACTTGATTGTTGCTTCAGCATGGAAGTGA 1779 0.4261 MSLIISPELADASYRNAKLYSLKGTDVTPGLSSHNFAPDKHRNMYMNDSYSSESYEKYFLDSPTEELIEPSSSGISGNSVHADSDSSYQLRANSGGSMVTDNPFDTYVSSTRKRDAYQSNFESDLFENESPDCFEFDGEMRLKLQELERALLGDNNDDCDDDGENIFRTVQSMDIDPDFAECANPAQKMSLHDSPKESLSSDSNLSCSSSCKEISQKSPRTPKQLLYECASALSEGNEVKASAMIDDLRQMVSIQGDPSTRIAAYMVEGLAARLASSGKSIYKALRCKEPPTSDRLAAMQILFEVCPCFKFGFIAANGAIAEAIKDDKKVHIIDFDINQGSQYITLIQTLASRPGKPPFVRLTGVDDPESVQRSVGGLSIIGQRLEKLAEVLGLPFEFRAVASSSSVVTPSMLNCRPGEAIVVNFAFQLHHMRDESVSTVNERDQLLRMVKSLNPKLVTVVEQDVNTNTSPFLPRFVEAYNYYSAVFESLDATLPRESQDRVNVERQCLARDIVNIIACEGEDRIERYEVAGKWRARLKMAGFTSSPMSENVEEAIKELIRQYCDKYKIKQEMGALHFGWEDKNLIVASAWK* 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3084 592 MobiDBLite consensus disorder prediction 191 206 - -
Tpr1g3084 592 ProSiteProfiles GRAS family profile. 213 592 IPR005202 -
Tpr1g3084 592 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 10 591 IPR030011 GO:0003700|GO:0005634
Tpr1g3084 592 MobiDBLite consensus disorder prediction 67 87 - -
Tpr1g3084 592 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 591 IPR005202 -
Tpr1g3084 592 Pfam GRAS domain family 223 592 IPR005202 -
Tpr1g3084 592 MobiDBLite consensus disorder prediction 187 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3084 Tpr-Chr1 35365228 35369082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3084 1 592 GRAS Transcription Factor Family AT1G21450 61.398 0.0 693
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr1g3084 GRAS 1.2e-135 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3084 - - gmx:100807048 903.664
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3084 1 35365228 35369082 Tpr1g3084 1 35365228 35369082 ECH