Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3076 ATGATTCATAACCAATCCATTTTCATCTTCCTTTTCACCCTTTTCATAGCTTCTCATGCAGCTTCTCCTCCTGTTTCTGCTGCTGTTGCATCATGTCCTATGGATCTCAGCTATGTTGAAACCTTTCCATGGGACACATCAACATGCAGAGATCCAATTGACTCAGAACACTGTTGTCAATCTCTTCTTAGTCTCTTTGGTATAGGACTTGCAAAACATCTTAAAGAAACATTAATCTTTCAACTTCCAAATGAAAACATTTCCTCAACATGTTTACAAGATTTCAAACTCAAACTTTCATCTTTAAAAATTCAACCATCATTAGTCCCTAGTTGTTTTCAAAACTCAACTCAATTTGTCACAAACACTTCAAGTTGTGCAGGTATATCAAACATCACAGATTGGAAACAAAAAGTTGGTATGTTAAGTCCTTTAGATACTTCTTGTAATGGTGATTTAAGTTCTGAAACTAGTTGTAATATTTGTACTGAAGCTGGTTTTAAAGTCACTGCTCAACTTAGAAATCTTTCTCCAAAAAATTCTTCTAAGTGTTTTTACTATTCAGTTTTATATGCTATTGGTATTGTGAATCAATTTGGTCCTACAGATCCTGTTACAGCTGGTTGTATACTTGGTATGGCACTTTCCTCAAAAGGGTCATCAAGTAATGGAAAAATTTTGAAACTTGTTTTTGGATTATTAGGTGCTGTTGTTGGTGTTATTCTAGCTTTTGTGTTGATTGTTATGTATAGAAAATGGAATAAGATGAGAAGAGAAAATCTTTATCATAGATCAGTTGAAAATAGTGTTAGAGACAGTGTTTTGCCTAATACAGGTGCTAAGTGGTTTCATATATCAGAACTTGAAAAAGCTACAAATAAGTTTTCACAGAAGAATATGATTGGTCAAGGTGGTGATGGTGTTGTGTTCAAAGGAACACTTTCTGATGGAACTTTAGTCGCGGTGAAAGAGATTTTTGATTTGGATACTCGAGGCGATGAAGAATTTTGTTATGAAGTTGAGATTATTAGCAAAATTAAGCATAGGAATCTTCTTGCTTTAAGAGGATGTTGTGTTACAAGTCATAGTGTTAAAGGTAAAAGAAGGTTTTTGGTTTATGATTATATGCCAAATGGAAGTTTAAGTTATCAATTATCAATTAATGGTGCTAATAAGTTAACTTGGCCACAAAGAAAGAATATTATTCTTGATGTAGCTAAAGGGCTAGCTTATTTGCATTATGAAATCAAGCCGCCGATTTTTCATCGTGATATTAAGGCGACTAATATACTTTTGGACTCAAAAATGAAAGCAAAAGTTGCTGATTTTGGATTAGCAAAACAAGGTAATGAAGGACAATCTCATCTTACAACAAGAGTAGCTGGTACATATGGTTATTTAGCCCCTGAGTATGCATTATACGGACAATTAACGGAGAAAAGTGATGTTTATAGTTTCGGAATTGTGATACTTGAAGTAATGAGTGGTAGAAAAGTTCTTGATACAATGAATTCACCTGTTGTTTTGATAACTGATTGGGCTTGGACACTTGCAAAATCAGGAAAAGTTAATGAAATATTTGATGAAGGAGTTAAAGATGAAGGGCCAGAAAAAATTATGGAAAGATTTGTACTTGTTGGAATTCTTTGTGCTCATGCAATGGTTGCATTAAGACCTACTATTGCAGAAGCACTTAAGATGTTAGAAGGTGATATTGATATTCCTAATTTACCTGATAGACCTGTTCCACTTGGTCATGAATCTTTTCAATCTTCACTTATGCAAGGAAGTGGAAGAACAACACCTTATACTTCATTTTATTCTACTTCAAATATTAGTACAATTAGTAGAAATTGA 1857 0.3355 MIHNQSIFIFLFTLFIASHAASPPVSAAVASCPMDLSYVETFPWDTSTCRDPIDSEHCCQSLLSLFGIGLAKHLKETLIFQLPNENISSTCLQDFKLKLSSLKIQPSLVPSCFQNSTQFVTNTSSCAGISNITDWKQKVGMLSPLDTSCNGDLSSETSCNICTEAGFKVTAQLRNLSPKNSSKCFYYSVLYAIGIVNQFGPTDPVTAGCILGMALSSKGSSSNGKILKLVFGLLGAVVGVILAFVLIVMYRKWNKMRRENLYHRSVENSVRDSVLPNTGAKWFHISELEKATNKFSQKNMIGQGGDGVVFKGTLSDGTLVAVKEIFDLDTRGDEEFCYEVEIISKIKHRNLLALRGCCVTSHSVKGKRRFLVYDYMPNGSLSYQLSINGANKLTWPQRKNIILDVAKGLAYLHYEIKPPIFHRDIKATNILLDSKMKAKVADFGLAKQGNEGQSHLTTRVAGTYGYLAPEYALYGQLTEKSDVYSFGIVILEVMSGRKVLDTMNSPVVLITDWAWTLAKSGKVNEIFDEGVKDEGPEKIMERFVLVGILCAHAMVALRPTIAEALKMLEGDIDIPNLPDRPVPLGHESFQSSLMQGSGRTTPYTSFYSTSNISTISRN* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3076 618 Pfam SPARK 29 184 IPR043891 -
Tpr1g3076 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Tpr1g3076 618 Pfam Protein kinase domain 296 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3076 618 CDD STKc_IRAK 301 570 - -
Tpr1g3076 618 PANTHER RECEPTOR-LIKE PROTEIN KINASE-RELATED 26 598 - -
Tpr1g3076 618 SMART serkin_6 295 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3076 618 PANTHER OS01G0253100 PROTEIN 26 598 IPR045271 GO:0004714|GO:0006468
Tpr1g3076 618 ProSiteProfiles Protein kinase domain profile. 295 555 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g3076 618 Gene3D Phosphorylase Kinase; domain 1 256 375 - -
Tpr1g3076 618 SUPERFAMILY Protein kinase-like (PK-like) 280 600 IPR011009 -
Tpr1g3076 618 Gene3D Transferase(Phosphotransferase) domain 1 376 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3076 Tpr-Chr1 35257861 35260083 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3076 31 600 Receptor kinase-like Gene Family AT1G11050 51.952 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Tpr1g3076 Pkinase 3.5e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3076 - - ccaj:109788171 941.799