Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3035 ATGTGTCATCCACAAACTCACAAGTCACAAAACAATTCTTCCATTGTGAGAGTTTGTGAGTGTGTCTTCTCTCTTTGTTTGTTTCCAAAGCTTAGAAAAGACACACCAAAGGAGTTAAATATGACGGATTTATGTGAAAAAATGAGCAAGGGGCTAAAAAGTATTAAGCCCTATCTTGCTATGGTGTCCCTTCAATTTGGCTATGCAGGAATGTACATCATCACTATGGTTTCATTCAAGCATGGCATGAGTCATTGGGTTCTCTCCGTGTACCGTCATGTTGTCGCTACTATCTTCATGGCTCCTTTTGCCCTCGTCCTCGAAAGAAAAATTAGGCCAAAGATGACACTCCCAATTTTCTTGAGGTTGGCGGTTCTTGGTTTCCTTGAGCCAGTGCTTGATCAAAATTTGTACAACTTGGGAATGAAGAACACATCAACAACGTTTGCATCTGCCACCGTTAACATTCTTCCAGCTATAACTTTTATAATGGCAATCATTTTCAGGTTAGAGACAGTAAACTTCAGAAAAATTCACAGCATAGCTAAGGTAGTTGGAACAGTAGTAACTGTATCAGGAGCAATGGTTATGACATTATACAAAGGCCCTGCCTTTCAGCTCATTAAGGGACATTCATCAGACCAACATGAAAGTGGAAGCACAGAACCCTCTGACCAAAACTTTGTGGCTGGCACTATAATGCTCATTTGCAGTTGTGGTGGTTGGGCTAGTTTCTTTATCTTGCAATCTTTCACTCTAAAGATGTACCCAGCAGAGCTCTCTATGACTGCTTGGATTTGCTTTTTGGGTATCTTTGAAGGTGGAATTGCAACCTTCATATTTGAACGTGACATGAGTGTTTGGGCCTTAGGTTTTGACTCTAGACTTCTTGCTTGTGTTTACTCTGGTATAGTGTGTTCTGGAATGGCATACTATGTACAAGGAGTTGTGACAAGAGAACGTGGGCCTGTGTTTGTTACTTCATTCAGCCCTTTATGTATGATCATCACAGCTGCATTGGGTTCTATTGTCTTAGCTGAGCAAACTCATTTGGGAAGTATTATTGGAGCTATTATCATTGTGTGTGGACTATACACTGTGGTGTGGGGGAAAAGCAAAGACAGTGTGAACAATACAACACAAAATGAGGGACAAGAATTGCCAATAAAGGATGCTACAAAAACAGGGTCAGACATTTTTGAAAGTGTTGAGGTCAATGTTCCTAGTGACATTAAGCTTGGAGGAAAGAATGTCAAAACATAA 1263 0.4046 MCHPQTHKSQNNSSIVRVCECVFSLCLFPKLRKDTPKELNMTDLCEKMSKGLKSIKPYLAMVSLQFGYAGMYIITMVSFKHGMSHWVLSVYRHVVATIFMAPFALVLERKIRPKMTLPIFLRLAVLGFLEPVLDQNLYNLGMKNTSTTFASATVNILPAITFIMAIIFRLETVNFRKIHSIAKVVGTVVTVSGAMVMTLYKGPAFQLIKGHSSDQHESGSTEPSDQNFVAGTIMLICSCGGWASFFILQSFTLKMYPAELSMTAWICFLGIFEGGIATFIFERDMSVWALGFDSRLLACVYSGIVCSGMAYYVQGVVTRERGPVFVTSFSPLCMIITAALGSIVLAEQTHLGSIIGAIIIVCGLYTVVWGKSKDSVNNTTQNEGQELPIKDATKTGSDIFESVEVNVPSDIKLGGKNVKT* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3035 420 Pfam EamA-like transporter family 231 368 IPR000620 GO:0016020|GO:0016021
Tpr1g3035 420 Pfam EamA-like transporter family 69 191 IPR000620 GO:0016020|GO:0016021
Tpr1g3035 420 PANTHER WAT1-RELATED PROTEIN 51 386 - -
Tpr1g3035 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 91 192 - -
Tpr1g3035 420 PANTHER WAT1-RELATED PROTEIN 51 386 IPR030184 GO:0016021|GO:0022857
Tpr1g3035 420 SUPERFAMILY Multidrug resistance efflux transporter EmrE 287 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3035 Tpr-Chr1 34803606 34810234 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3035 52 399 Nodulin-like Gene Family AT1G44800 63.173 6.23e-166 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3035 - - gmx:100814921 615.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3035 1 34803606 34810234 Tpr1g3035 1 34803606 34810234 ECH