Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3034 ATGGGTGAATTAACATATTGTGAGAAAGCTAATGCATGGTTAAGAAATTCAAAGGCATATTTGCTAATAATTAGCTTGCAATTTGGCTCTGCTGGCATGTATGTTCTTACCATGGATGCTCTTAATAAGGGCATGAGTCACTATATTTTTGTGGTTTATCGTAATGTCATCGCCACTGTAGCTCTTGTTCCCTTCGCATTTTTTCTTGAAAGGAAAACTAGGCCCAAGATGACAGTTCGGATATTCTCAGAAATTTTTGCAGTGGCTTTTGTTGAGATAATACTTGATCAGTGTTTCACGTTCTTGGGGATGAAGCTAACATCAGCATCTTTTGCATCTGCCGTGATGAATTCCGTACCATCTATTACCTTTGTACTTGCAATCATTTTTAGATTGGAGCGCATGAAAATTAAGGAGATAGGATGTCAAGCTAAAGTGATTGGCACAGTGGTGAGTTTGGGAGGTGCATTTCTAATGGCCCTATACAAAGGTCCAGTTCTACAAATTCATGGGTCATCAGCAGCTACCCAAATGCACCAACCTGAAAATGTCAATGACCCTAGTGGTACACATTGGCTCCTTGGTGCATTGTTTGTTCTCATTGGTTGTGTCGGCTTCGCTGCTTTCTACATTTTACAAACCATAACATTAAAAAAGTATCCAGCAGAGATGTCCCTAGCCACGTGGGTTTGTTTTATTGGTACACTTCAAAGTAGTGCTGTGACAATTTTCATGGAGCGGAAAAGCCCAGAAGCCTGGGCTTTGGGCCTGGATTCAAGACTTTATGCTTCGGTCTACGCGGGTATAGTAACTTCAGCAATTCAATTTTATGTGCAAGGATTAGTAATTAAAACTATGGGCCCTGTTTTTGTGACTGCTTTTAATCCCCTACGTATGATTATAGTCATAGCCTTGGCTTGTATCTTCCTCTCAGAGAAACTTCACCTCGGAAGCATTCTTGGAGGAGTGGTAGTGGTTACAGGGTTATATCTTGTTGTATGGGGCAAATCCAAAGAACAAAAAAGAATAATGGCAGAAGAGGAGGCTCGACAAAAAATCTCCCAACAAGAACAACAACAACTACCAATTACTGTCCCCAAAGTTGATGTCAATGAAAATAATAAATCTCAATTAGTCATAATTGGAGACCAAACAAGCACATAG 1164 0.4012 MGELTYCEKANAWLRNSKAYLLIISLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATVALVPFAFFLERKTRPKMTVRIFSEIFAVAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPVLQIHGSSAATQMHQPENVNDPSGTHWLLGALFVLIGCVGFAAFYILQTITLKKYPAEMSLATWVCFIGTLQSSAVTIFMERKSPEAWALGLDSRLYASVYAGIVTSAIQFYVQGLVIKTMGPVFVTAFNPLRMIIVIALACIFLSEKLHLGSILGGVVVVTGLYLVVWGKSKEQKRIMAEEEARQKISQQEQQQLPITVPKVDVNENNKSQLVIIGDQTST* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3034 387 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020|GO:0016021
Tpr1g3034 387 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
Tpr1g3034 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 338 - -
Tpr1g3034 387 PANTHER WAT1-RELATED PROTEIN 14 369 - -
Tpr1g3034 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
Tpr1g3034 387 PANTHER WAT1-RELATED PROTEIN 14 369 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3034 Tpr-Chr1 34772779 34776604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3034 18 387 Nodulin-like Gene Family AT1G44800 44.974 7.16e-112 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3034 - - gmx:100813852 565.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g3034 1 34772779 34776604 Tpr1g3034 1 34772779 34776604 ECH