Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g3033 ATGGGTGAATTAACATATTGTGAGAAAGCTAATGCATGGTTAAGAAATTCAAAGTCATATTTGCTAATAATTAGTTTGCAATTTGGCTCTGCTGGCATGTATGTTCTTACCATGGATGCTCTTAATAAGGGCATGAGTCACTATATTTTTGTGGTATATCGTAATGTCATCGCCACCGTAGCTCTTGCTCCCTTCGCATTTTTTCTTGAAAGGAAAATTAGGCCCAAGATGACAGTTCGGATATTCTCAGAAATTTTTGCACTGGCTTTTGTTGAGATAATACTTGATCAGTGTTTCACGTTCTTGGGGATGAAGCTAACATCAGCATCTTTTGCATCTGCCGTGATGAATTCCGTACCATCTATTACCTTTGTACTTGCAATCATTTTTAGATTGGAGCGCATGAAAATTAAGGAAATAGGATGTCAAGCTAAAGTGATTGGCACAGTAGTGAGTTTGGGAGGTGCATTTCTAATGGCCCTATACAAAGGTCCAGTTCTTCAAATTGCTGGGTCATCAGCAGCTACTCAAATGCACCACCCAGAAAATGTCAATGATCCTAGTGGTTCACATTGGCTCCTTGGTGCATTGTTCCTTCTCATTGGTTGCGCCGGCTTTTCTGCTTTCTATATTTTACAAGCCATAACATTAAGAAAGTATCCAGCTGAAATGTCACTAGCCACGTGGGTTTGTTTTATTGGTGCACTTCAAAGCAGTGCTGTGACAATTTTCATGGAGCGCAAAAGCCCTGATGCTTGGGCTTTGGGCCTGGATTCAAGACTTTTTGCTTCAGTCTATGCGGGAATAGTAACTTCAGCAATTCAATTTTATGTACAAGGCTCGGTAATTAAAACTATGGGCCCTGTTTTTGTGACTGCTTTTAATCCCCTACGTATGATTATAGTAACAGCCTTGGCTTGTATCGTCCTCTCAGAAAAACTTCATCTCGGAAGCATTGTTGGAGGAGTGGTGGTGGTTACAGGGTTATATCTTGTTGTATGGGGAAAATCCAAAGAACAAAAAAGAATAATGTTAGAAGAGGAGGCTCCACAAAAAATCTCCCAACAAGGACAACAACAACTACCAATTACTGTCCCCAAAATTGGTGTCAATGATAATAATAAATCTCAATTGGTCATAATTGGAGACCAAACAAGCACATAG 1164 0.3986 MGELTYCEKANAWLRNSKSYLLIISLQFGSAGMYVLTMDALNKGMSHYIFVVYRNVIATVALAPFAFFLERKIRPKMTVRIFSEIFALAFVEIILDQCFTFLGMKLTSASFASAVMNSVPSITFVLAIIFRLERMKIKEIGCQAKVIGTVVSLGGAFLMALYKGPVLQIAGSSAATQMHHPENVNDPSGSHWLLGALFLLIGCAGFSAFYILQAITLRKYPAEMSLATWVCFIGALQSSAVTIFMERKSPDAWALGLDSRLFASVYAGIVTSAIQFYVQGSVIKTMGPVFVTAFNPLRMIIVTALACIVLSEKLHLGSIVGGVVVVTGLYLVVWGKSKEQKRIMLEEEAPQKISQQGQQQLPITVPKIGVNDNNKSQLVIIGDQTST* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g3033 387 PANTHER WAT1-RELATED PROTEIN 14 369 IPR030184 GO:0016021|GO:0022857
Tpr1g3033 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 229 338 - -
Tpr1g3033 387 Pfam EamA-like transporter family 19 160 IPR000620 GO:0016020|GO:0016021
Tpr1g3033 387 Pfam EamA-like transporter family 194 333 IPR000620 GO:0016020|GO:0016021
Tpr1g3033 387 PANTHER WAT1-RELATED PROTEIN 14 369 - -
Tpr1g3033 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g3033 Tpr-Chr1 34756203 34759710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g3033 18 387 Nodulin-like Gene Family AT1G44800 46.486 5.20e-114 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g3033 - - gmx:100813852 597.43