Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g3006 | ATGGCATTTTTAATATTCAAATGGCGACAAAAACATTTATCTATGTATGATGGCATCGAAAATTTTCTACGTAGCGACAATAGCATCATGCCTATAAGATACTCTTACAAAGACATAAAAAAGATAACAGAACAATTCAAGACAAAACTAGGCAATGGAGGTTACGGATCTGTTTTCAAAGGACAACTTCGAAGTGGTCGTCTTGTAGCAGTCAAGTTATTGGACAATGGCAAGTCTAATGGTCAAGATTTTGTTAATGAAGTTGCAACCATTGGTAGGATTCACCATGTTAACGTGGTACAACTCATTGGTTTTTGTGTGGAGGGTTCAAAACGTGCTCTTATATATGAATTCATGCCGAATGGGTCACTTGAAAAATACATATTTTCTCATACTGAAGAGAGTAATTCCTTGAGTTGTGAAAAATTGTATGACATTTCTCTTGGAGTGGCTCGAGGCATTGAGTACTTGCATAATGGATGCAATATGAAAATTCTACACTTTGACATAAAGCCTCATAACATCCTTCTCGATGAAAATTTCAATCCAAAAGTTTCTGATTTTGGACTAGCTAGACTTTGTCCAACCGATAATAGTATTGTGTCATTAACTGCAGTAAGAGGAACCATTGGATACATGGCCCCTGAACTATTCTACAGAAATGTCGGCACAATATCTTACAAAGCCGATGTCTATAGTTTTGGGATGTTGTTAATGGAGATGGCAAGTAGAAGGAAGAATTTGAATGCATTAGCTGAGCAATCCAGCCAAATTTATTTTCCTTTTTGGGTTTATGATCAGTTACATGATGGAATAGATGTAACAATTGAGAATGACACAGATAACGAAATGAAATTGGCAAAGAAAATGATGATTGTAGCTTTGTGGTGTATACAGACAAAACCTAATGACCGTCCTCCAATGGATAAAGTGTTGGAGATGCTTGAAGAAGAAGATGAGAATTTGCAAATTCCTAACAAGTGTTACATTTATGCACAAGATGTAAGAGCTGAGGATGTTACTGATAATACTGCTAGCAGTTCATGGTCTTCCTCTTGTACATCAATAACTTATTCCAAGGAATAA | 1086 | 0.36 | MAFLIFKWRQKHLSMYDGIENFLRSDNSIMPIRYSYKDIKKITEQFKTKLGNGGYGSVFKGQLRSGRLVAVKLLDNGKSNGQDFVNEVATIGRIHHVNVVQLIGFCVEGSKRALIYEFMPNGSLEKYIFSHTEESNSLSCEKLYDISLGVARGIEYLHNGCNMKILHFDIKPHNILLDENFNPKVSDFGLARLCPTDNSIVSLTAVRGTIGYMAPELFYRNVGTISYKADVYSFGMLLMEMASRRKNLNALAEQSSQIYFPFWVYDQLHDGIDVTIENDTDNEMKLAKKMMIVALWCIQTKPNDRPPMDKVLEMLEEEDENLQIPNKCYIYAQDVRAEDVTDNTASSSWSSSCTSITYSKE* | 362 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g3006 | 361 | Gene3D | Phosphorylase Kinase; domain 1 | 23 | 118 | - | - | |
Tpr1g3006 | 361 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 1 | 329 | IPR045874 | GO:0004672 | |
Tpr1g3006 | 361 | Pfam | Protein kinase domain | 46 | 313 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3006 | 361 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 165 | 177 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g3006 | 361 | Gene3D | Transferase(Phosphotransferase) domain 1 | 119 | 330 | - | - | |
Tpr1g3006 | 361 | PANTHER | INSENSITIVE 1-ASSOCIATED RECEPTOR KINASE 1, PUTATIVE-RELATED | 1 | 329 | - | - | |
Tpr1g3006 | 361 | SMART | serkin_6 | 44 | 315 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3006 | 361 | ProSiteProfiles | Protein kinase domain profile. | 44 | 322 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g3006 | 361 | SUPERFAMILY | Protein kinase-like (PK-like) | 24 | 316 | IPR011009 | - | |
Tpr1g3006 | 361 | ProSitePatterns | Protein kinases ATP-binding region signature. | 50 | 72 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g3006 | Tpr-Chr1 | 34473942 | 34475454 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g3006 | 33 | 348 | Receptor kinase-like Gene Family | AT5G38280 | 50.156 | 2.19e-110 | 335 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Tpr1g3006 | Pkinase | 3.5e-48 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g3006 | - | - | mtr:MTR_1g031200 | 586.645 |