Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2974 ATGGGTTTCGGAATTTCCTACGTTCTTCACCTTATTGTGCTGTTTTCTCTTATGTTTTTTTGTGCTTGGTCTCAAGATGATGGTGCTGTGATGCAAAAGCTGAAAACTTCACTATCAAAAAATAATCTTGATTGGTCAAACAATGATTATTGCAAATGGGCGGGAGTTAATTGCAATGGAATGAATAGGGTTACTTCAATAAAACTTAACAGTTCAACTGTTCAAGGTTCTTTACCAGAAGAATTGGCGAAACTCAGTGAGTTAACTAATTTTGATTTCAGGGGAAATAGTTTATCTGGAAATGTTCCTTACATGCCAAATTCACTTCAGTATTTGCATATTAACAATAACAATTTCACTTCCATGCCAAATGATTTCTTCAATAACCTCACTAATTTGATAGAGGTAGGAATTGATTCTAACCCTTTTTCTCAATGGCAAATTCCTTCTAGTCTTAAGAATTGTTTAGCCCTACAATCTTTTTCTGCTGTCAATGTTAGTTTTGTTGGTCAAATTCCTGAATTCTTTGGTGAACAAACTTTTCCAAGCTTGACTTTTTTGAGTCTAAGTTTCAATTATCTTGAAGGTAATTTGCCTAATACTTTATCTGGTAGTTCAATACAGAAGCTTTGGGTGAATGGTCAAAAGAGTAATAATAAACTCAATGGTACACTTTCTGTTTTACAAAATATGACTTCATTGCAACAAATTTGGGTTCATGGCAATTTGTTTACTGGTCCTATACCTGATTTTTCAAATCTCGATCAATTGTTTGATGTTAGTTTGAGGGATAATAAGTTAACCGGTGTTGTTCCACCGTCTTTAACTTCCCTTCAGAGTTTGAAAGTTGTGAATTTGACAAACAATGATCTTCAAGGTTCACCTCCTAAGTTTCAAGACGGTGTTCAGGTTGATATGGATTTGGTTAGAGGGACTAATAGCTTTTGCACCAAGGTTGTTGGTCAACCATGTAGTCCACTTGTTAATGCTTTGCTTTCTGTTGCTGAAGCTTTTGGTTATCCTTTTAAACTTGCTGACAGTTGGCAAGGTAATAGCCCTTGTAATGGCAGTGTTGTTTGGGTAGGGATTACTTGTTCTCGTGGTAATATTTCTGTTATTAACTTTCAAAACATGGGTTTTTCTGGCAGTATATCTCCTAGTTTTGCAAGTCTTAGTTCTGTGACAGAGTTGCTTCTTGCTAACAATAATCTCACCGGAACTATACCTAAAGAACTTGCTAGTATGCCGGCTTTGAAATTGCTAGATGTTTCCAATAATTCATTGTATGGTCAGATACCGTCGTTTCGTGCAGGTGTGGTTGTTAAAACCAATGGGAATCCTGATATCGGAAAGGATAAACCTCACGGGTCGCCCAGCTCTAGTTCTGGAGGGGAGGATAAGAAGAAACTTGGTGTTGGAACTATTGTTGGTATTGTGATGGGGATTGTTGGCTTACTTTGTGTAGGGGTTTTGGTATTTGTTATGTATGGTAGAAGACATAATAAGCGCTACAACAATGTTCAAACTCCAAATGCAATAGTGGTACATCCTCGTCATTCTGGAGATGGAAATGCTGTGAAGATAAGTGTTGCAGCATCTGGAAGTGCTGGTGTTGTAGGAGGGACTGGTGATTTTAGTCCATCGAGTAGTGTTCAAAATGTGGAAGCTGGTAATATGGTCATATCGATTCAAGTTTTGAGAGAAGTTACAGATAATTTTAGTGAAAAGAACATATTGGGGAAGGGAGGTTTCGGCACTGTATACAAAGGAGAATTGGCCGATGGAACGAAAATTGCAGTTAAAAGGATGCAAACTGAAATGGTTGGTGACAAAGGGCTGAATGAGTTCAAATCTGAAATTGCAGTTCTTACTAAGGTTCGACATAGGCATTTGGTCGGACTTCTCGGCTATTGCTTGGAAGACAATGAGAAACTTCTTGTCTATGAATACATGCCTCAGGGGACTCTTAGTCAACATCTGTTTGACTGGAAAGATGATGGGTCAAAACCGCTCGAATGGAAGAGAAGGCTCTCCATTGCTTTAGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACATCAAATTTTCATCCACAGGGATCTGAAACCATCAAATATCTTGCTTGGGGATGATATGCGCGCTAAAGTATCCGACTTTGGGTTGGTTCGACTTGCTCCAGAAGGACAAGCCTCATTCCAGACTAGAATTGCTGGAACTTTTGGATATCTAGCACCGGAGTATGCAGTAACCGGAAGAGTCACCACAAAGGTTGACGTATACAGCTTCGGTGTGATTCTTATGGAGATGATAACCGGAAGGAGAGCACTCGACAACAGCCAACCAGAGGAGAACATCCACCTTGTTACATGGTTCCGCAGGATGCTATTGAGCAATAACTCGTTCGAAAAGATCATTGATCCGACAATGGATATCGATGAGGAAGGCTTGAAGAGTTTCAAGACTATTGCAGGATTGGCCGGCAACTGTTGTGTTAGAGAGCCTAATCAACGTCCTGACATGGGACACGTAGTGAACGTACTAGCACCTCTTGTCGAGGTTTGGAAGCCGGCTGAACTTGATGCCGATGACATGTATGGGATTGACCTTGATATGAATTTGCCTGAAGCACTAAGTAGGTGGAAGAATCTTGAAGGAATGAGCAACACACTCGATGTTTCGTATTCCTCCTCGATGGTTGATAGTTGTGAGAATACACAGTCAAGTATACCGCCTCGGGCTCCTGGATTTGCTCATTCCTTTACATCTACTGATGCGCGATGA 2787 0.4001 MGFGISYVLHLIVLFSLMFFCAWSQDDGAVMQKLKTSLSKNNLDWSNNDYCKWAGVNCNGMNRVTSIKLNSSTVQGSLPEELAKLSELTNFDFRGNSLSGNVPYMPNSLQYLHINNNNFTSMPNDFFNNLTNLIEVGIDSNPFSQWQIPSSLKNCLALQSFSAVNVSFVGQIPEFFGEQTFPSLTFLSLSFNYLEGNLPNTLSGSSIQKLWVNGQKSNNKLNGTLSVLQNMTSLQQIWVHGNLFTGPIPDFSNLDQLFDVSLRDNKLTGVVPPSLTSLQSLKVVNLTNNDLQGSPPKFQDGVQVDMDLVRGTNSFCTKVVGQPCSPLVNALLSVAEAFGYPFKLADSWQGNSPCNGSVVWVGITCSRGNISVINFQNMGFSGSISPSFASLSSVTELLLANNNLTGTIPKELASMPALKLLDVSNNSLYGQIPSFRAGVVVKTNGNPDIGKDKPHGSPSSSSGGEDKKKLGVGTIVGIVMGIVGLLCVGVLVFVMYGRRHNKRYNNVQTPNAIVVHPRHSGDGNAVKISVAASGSAGVVGGTGDFSPSSSVQNVEAGNMVISIQVLREVTDNFSEKNILGKGGFGTVYKGELADGTKIAVKRMQTEMVGDKGLNEFKSEIAVLTKVRHRHLVGLLGYCLEDNEKLLVYEYMPQGTLSQHLFDWKDDGSKPLEWKRRLSIALDVARGVEYLHGLAHQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQASFQTRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEMITGRRALDNSQPEENIHLVTWFRRMLLSNNSFEKIIDPTMDIDEEGLKSFKTIAGLAGNCCVREPNQRPDMGHVVNVLAPLVEVWKPAELDADDMYGIDLDMNLPEALSRWKNLEGMSNTLDVSYSSSMVDSCENTQSSIPPRAPGFAHSFTSTDAR* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2974 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Tpr1g2974 928 Gene3D Phosphorylase Kinase; domain 1 543 650 - -
Tpr1g2974 928 SMART LRR_typ_2 391 415 IPR003591 -
Tpr1g2974 928 SMART LRR_typ_2 105 129 IPR003591 -
Tpr1g2974 928 SMART LRR_typ_2 278 300 IPR003591 -
Tpr1g2974 928 SMART LRR_typ_2 181 204 IPR003591 -
Tpr1g2974 928 Gene3D Ribonuclease Inhibitor 24 322 IPR032675 -
Tpr1g2974 928 MobiDBLite consensus disorder prediction 905 928 - -
Tpr1g2974 928 Pfam Protein kinase domain 574 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2974 928 ProSiteProfiles Protein kinase domain profile. 573 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr1g2974 928 Pfam Leucine rich repeat N-terminal domain 329 366 IPR013210 -
Tpr1g2974 928 Pfam Leucine rich repeat N-terminal domain 25 59 IPR013210 -
Tpr1g2974 928 SUPERFAMILY L domain-like 42 435 - -
Tpr1g2974 928 Gene3D Ribonuclease Inhibitor 327 453 IPR032675 -
Tpr1g2974 928 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED 1 928 - -
Tpr1g2974 928 SUPERFAMILY Protein kinase-like (PK-like) 561 870 IPR011009 -
Tpr1g2974 928 CDD STKc_IRAK 579 852 - -
Tpr1g2974 928 Gene3D Transferase(Phosphotransferase) domain 1 651 865 - -
Tpr1g2974 928 ProSitePatterns Protein kinases ATP-binding region signature. 579 601 IPR017441 GO:0005524
Tpr1g2974 928 PANTHER OSJNBA0070M12.3 PROTEIN 1 928 - -
Tpr1g2974 928 MobiDBLite consensus disorder prediction 446 466 - -
Tpr1g2974 928 SMART serkin_6 573 853 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2974 Tpr-Chr1 34138865 34143022 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2974 28 855 Receptor kinase-like Gene Family AT5G07280 30.337 4.20e-85 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Tpr1g2974 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2974 - K00924 gmx:100776064 1213.36