Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2949 ATGGACATACACATACAATATTGTGTTTGGACATTTGCTACTTTGTTAGCATGCTATTTTTATGTGAACATTTTTGTGTGGAGATTGAATGAATGGTATTATAATATGAAACTAAGAAAGAAACAATACCCTCTTCCTCCTGGTCATTTGGGATGGCCTCTTATTGGCAATATGATAGCCTTTGTTAGAGATTTCAAATCTGGTCGTCCTGATTCATTCATCAACAACCTTATTTCCAGATATGGACGAACCGGTATCTACAAGTCACACTTATTTGGGAGTCCAAGCATCATCATTAGTGATGCTGATATGTGTAGGCGAGTGCTAACAAATGATGAGAATTTTAAAACCGGTTATCCAAAATCCACTCTTAAATTGATTAAATGTACTAAATCCTATTGGAGTTCTTCTAGAGAAAACCAAAAGCGGTTTAAACGTCTAATAACCTCAGTTCTTATGGGTCACAATACATTAGAAATGTACCTAACTCGCATGGAGGACATAGTGATTAATTCTTTGGAGGAACTTTCTAGTATGAGTCACCCGGTTGATTTTCTCAAAGAGATGAAAAATATTTCCTTTGATATCATCATTGAAATTTTCATTGGCTCTTACAATCAACACATAGTTACCAAAATAGGGAATTCTTTCACTGAAATTTATAGTGCTTTGTGGTCTATGCCCATTAACTTTCCTGGTTTTGCTTTTCATAAAGGACTTCTGGCACGTGAGAAGTTGGCCAAATTAGTACAACCTATTGTAGAAGAAAGGAGGTTGATGAAAAGAAATGGTGACAAAAAAGATTTACTTGATATTTTTTTGGAGTTGAGGGATGAAGAAGATGGTTGGAAACCAGAGGATGAGGACATTGCTGACATGATGATAGGATTTGTACTTGCTGGTCATGAAACCATAGCAAATGCTATGATGTGGTCAATTATATATCTTACAAAAAATCCACATGTCTTGAAAAAAGCAAAGGAAGAGCAGGAGGAAATTATAAAGAAAAGACTGCCCACACAAAAACAATCAAATCTTAAGGAGATTAAGCAAATGGTTTATCTTTCTCATATAATCAACGAAGTGTTACGACTTGTCTCTATGAACTTTGCAAATTTTCGGGAGGCAACTAGAGATGTTAATATCAATGGTTATATAATACCAAAAGGATGGAAAGTTCTCGCTTGGGCAAGAGCTGTTCATATGGATCCTACATATTATTCAAATCCAGATGAATTTAATCCATCCAGATGGAATGATCACAATGCCAAAGTTGGGACCTTTTTTCCTTTTGGAGCTGGAAGTATGCACTGTCCTGGGAGTGACTTGACAAAAATTCAAATTTCCATATTTCTACATCACTTTCTTCTCAATTACAAGTTGGAGCGAGTAAACCCAGAATGTCCTATTACTTACTTACCATCATCCAAGCCCAAAGACAATTGCCTTGCTAAGGTGATAAAGGTCTCAAGCGTTGGTGCATAA 1485 0.3596 MDIHIQYCVWTFATLLACYFYVNIFVWRLNEWYYNMKLRKKQYPLPPGHLGWPLIGNMIAFVRDFKSGRPDSFINNLISRYGRTGIYKSHLFGSPSIIISDADMCRRVLTNDENFKTGYPKSTLKLIKCTKSYWSSSRENQKRFKRLITSVLMGHNTLEMYLTRMEDIVINSLEELSSMSHPVDFLKEMKNISFDIIIEIFIGSYNQHIVTKIGNSFTEIYSALWSMPINFPGFAFHKGLLAREKLAKLVQPIVEERRLMKRNGDKKDLLDIFLELRDEEDGWKPEDEDIADMMIGFVLAGHETIANAMMWSIIYLTKNPHVLKKAKEEQEEIIKKRLPTQKQSNLKEIKQMVYLSHIINEVLRLVSMNFANFREATRDVNINGYIIPKGWKVLAWARAVHMDPTYYSNPDEFNPSRWNDHNAKVGTFFPFGAGSMHCPGSDLTKIQISIFLHHFLLNYKLERVNPECPITYLPSSKPKDNCLAKVIKVSSVGA* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2949 494 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS P450 superfamily signature 357 368 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS P450 superfamily signature 429 438 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS P450 superfamily signature 438 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PANTHER CYTOCHROME P450 88D6 25 467 - -
Tpr1g2949 494 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS E-class P450 group I signature 428 438 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PRINTS E-class P450 group I signature 438 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 PANTHER CYTOCHROME P450 26 25 467 - -
Tpr1g2949 494 Gene3D Cytochrome P450 35 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 SUPERFAMILY Cytochrome P450 39 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr1g2949 494 Pfam Cytochrome P450 46 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2949 Tpr-Chr1 33862327 33870008 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2949 12 489 Cytochrome P450 AT2G32440 45.738 1.28e-162 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2949 K04123 K17875 ag:BAG68929 639.802