Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2948 | ATGGGTTTTGGAGTTTCATACGTTGTTCATGTCCTTGTGTTGTTTTCTGTTATGTTTGTTTGTGCATGGTCACAATCACAAGATGATGGTGCTGTGATGCAAAAGCTGAAAACTGCAATATCAAAAAGTAATCTTAATTGGTCAGACGATGATTTTTGCAATTGGGAAAAAGTTCAGTGTAGTGGACGTAGGGTGACTTCAATTGAAATTCCACAGAATCACAATGTTGAAGGTTCTTTACCAAAAGAATTGGTGCAACTCACTGAGTTAACTGATTTTCGTTGCACTGGAAATGATTTATCTGGAGTTGTCCCTTACATGCCAAATTCCCTTCAGAATTTGTATATTGACAACAACACATTCACTTCCATGCCAAATGATTTCTTCAATAACCTGACTAATTTGATAGAGGTAGGAATTGGTTATAACCCTTTTCCTCAATGGCAAATTCCTTCTAGTCTTAAGAATTGTTTAGCCCTTAAGAAGTTTTCTGCTAATAATGCTAGTTTTGTTGGTCAAATTCCTGAATTCTTTGGAACAGTAACTTTTCCAAGTTTGACTGATTTATTGCTAGCTTACAATTCTCTTGATGGTAATTTGCCTAATAGTTTATCTGGTAGTTCTATACAGACCCTTTGGGTCAATGGTCAAAATAGTATTAATAAACTCAATGGTACACTTTCTGTTTTACAAAATATGACTTCATTGCAACAAATTTGGGTTCAAAGTAATAATTTTACTGGTCCTATACCTGATTTATCAAATCTTGATCAATTAGTTAGTGTTAGTTTTAGGGATAATCAGTTAACTGGTGTTGTTCCAGCCTCTTTAACTTCCCTTCAGAGTTTGAAAAATGTGGGACTGTCAAACAATAATCTTCAAGGGTCACGTCCTAAGTTTAGTGATGGTGTTGAGGTTGACATGGGTTATGGGAATAACTTTTGCACTAAGAATGTTGGTGAACCATGTAGTCCACTTGTTAATGTTTTGCTTTCTGTTGTTGAACCTTTGGGTTATCCTCTCATACTTGCTCAAAGTTGGAAAAGTAATGACCCTTGTGATGGTTCTTGGTCCCCATACATTACTTGTTCTAACGGTAACATCACCACTATCAACTTTCAAAACAAGGGTTTTTCTGGTAGTATATCTCCTAGTTTTGCAAGTCTTACTTCTGTGACGAGGTTGCTTCTTGCTAAAAATAATCTCACCGGTACCATACCTAAGGAACTTGCTAGTATGCCGGCTCTGAAAGAGCTAGATGTTTCCAATAATAAGTTATATGGTCAGATACCTTCGTTTCGTGCAGGTGTGGTTGTTAACACCAATGGGAATCCTGATATCGGAAAGGATAAACCTCACGGGTCGCCCGACTCTAGTTCTGGAGGGGAAGATAAGAAGAAAAATGGTGTTGGAGCTATTATTGGTGTTGTTATGGGGATTATTGGCTTACTGGTTGTAGGGGTTTCGGTATTTGTTATTTGTCGTAGAAGACATAATAAGCGCGATGGAAAAGTTCAAACTCCAAATGCAATAGTAGTACATCCTCATCATTCTGGAGATGGAAATGCTGTGAAGATAAGTGTTGCAGCATCTGGAATTGCTGGTGCCGGCATTGCAGGAGGAACCAGTGGATTTAGTCCATCGAGTAGTGTTCAAAATGTGGAAGCTGGTAATATGGTCATTTCAATTCAAGTTTTGAGAGAAGTTACGGATAATTTTAGCGAAAAGAACATATTGGGGAAGGGAGGTTTTGGCACTGTATACAAAGGAGAATTGGCCGATGGAACGAAGATCGCAGTTAAAAGGATGCAATCTGAAATGGTTGGTGACAAAGGGCTGAATGAGTTCAAATCTGAAATTGCGGTTCTTACTAAGGTTCGACACAGGCATTTGGTCGGACTTCTCGGCTATTGCTTGGAAGACAATGAGAAACTTCTTGTCTATGAATACATGCCTCAGGGGACTCTTAGTGAACATCTGTTTGACCGAAAAGATGACGGGTCAAAACCGCTTGACTGGAAAACAAGGCTCTCCATTGCCTTGGACGTTGCTAGAGGTGTTGAATACCTTCATGGTTTGGCTCAGCATAGTTTTATCCACAGGGATCTGAAACCGTCAAACATCTTGCTTGGTGATGATATGCGCGCTAAAGTATCCGACTTTGGATTGGTTCGACTTGCTCCTGAAGGACAAGCCTCATTCGAGACTAGACTGGCCGGAACTTTTGGATATCTAGCACCAGAGTATGCAGTCACCGGACGTGTCACCACAAAGGTCGATGTATACAGCTACGGCGTGATTCTTATGGAGATTATAACCGGAAGGAGAGCAATTGACAACAGCCAACCAGAGGAAAATATGCACCTTGTTACATGGTTCCGCAGGATTCTACTGAACAAAGACTCGTTCGGAAAGGTCATTGATCCAGCAATGGACATCAATGAGGAAGGCTTGGAGAGTTTCAGGGATATTGCAGGGTTGGCAAGCCACTGTTGTGCAAGAGAGCCGCATCAGCGTCCCGAAATGGGACAGATAGTAAATGTGTTAGCACCTCTTGTCGAGATTTGGAAGCCGGCTGAACTTGATGACGATGACATATATGGGATTGACTTGGAAATGAGTTTGCCTCAAGTACTAAGTAAGTGGAAGAACCTTGAAGGAATGAGCAACACACTCGATGCTTCTTCATCGATGAGTGCTAATATTGAAAATACACAATCAAGTATACCAGCTCGGTCTTCCTATCCTTTTACATCTGCAGAGGCGCGATGA | 2772 | 0.4055 | MGFGVSYVVHVLVLFSVMFVCAWSQSQDDGAVMQKLKTAISKSNLNWSDDDFCNWEKVQCSGRRVTSIEIPQNHNVEGSLPKELVQLTELTDFRCTGNDLSGVVPYMPNSLQNLYIDNNTFTSMPNDFFNNLTNLIEVGIGYNPFPQWQIPSSLKNCLALKKFSANNASFVGQIPEFFGTVTFPSLTDLLLAYNSLDGNLPNSLSGSSIQTLWVNGQNSINKLNGTLSVLQNMTSLQQIWVQSNNFTGPIPDLSNLDQLVSVSFRDNQLTGVVPASLTSLQSLKNVGLSNNNLQGSRPKFSDGVEVDMGYGNNFCTKNVGEPCSPLVNVLLSVVEPLGYPLILAQSWKSNDPCDGSWSPYITCSNGNITTINFQNKGFSGSISPSFASLTSVTRLLLAKNNLTGTIPKELASMPALKELDVSNNKLYGQIPSFRAGVVVNTNGNPDIGKDKPHGSPDSSSGGEDKKKNGVGAIIGVVMGIIGLLVVGVSVFVICRRRHNKRDGKVQTPNAIVVHPHHSGDGNAVKISVAASGIAGAGIAGGTSGFSPSSSVQNVEAGNMVISIQVLREVTDNFSEKNILGKGGFGTVYKGELADGTKIAVKRMQSEMVGDKGLNEFKSEIAVLTKVRHRHLVGLLGYCLEDNEKLLVYEYMPQGTLSEHLFDRKDDGSKPLDWKTRLSIALDVARGVEYLHGLAQHSFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSYGVILMEIITGRRAIDNSQPEENMHLVTWFRRILLNKDSFGKVIDPAMDINEEGLESFRDIAGLASHCCAREPHQRPEMGQIVNVLAPLVEIWKPAELDDDDIYGIDLEMSLPQVLSKWKNLEGMSNTLDASSSMSANIENTQSSIPARSSYPFTSAEAR* | 924 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2948 | 923 | SUPERFAMILY | L domain-like | 43 | 433 | - | - | |
Tpr1g2948 | 923 | Pfam | Protein tyrosine and serine/threonine kinase | 576 | 848 | IPR001245 | GO:0004672|GO:0006468 | |
Tpr1g2948 | 923 | PANTHER | OSJNBA0070M12.3 PROTEIN | 1 | 923 | - | - | |
Tpr1g2948 | 923 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 698 | 710 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g2948 | 923 | Gene3D | Transferase(Phosphotransferase) domain 1 | 651 | 864 | - | - | |
Tpr1g2948 | 923 | SUPERFAMILY | Protein kinase-like (PK-like) | 561 | 874 | IPR011009 | - | |
Tpr1g2948 | 923 | PANTHER | TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED | 1 | 923 | - | - | |
Tpr1g2948 | 923 | Gene3D | Phosphorylase Kinase; domain 1 | 542 | 650 | - | - | |
Tpr1g2948 | 923 | ProSiteProfiles | Protein kinase domain profile. | 573 | 853 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2948 | 923 | CDD | STKc_IRAK | 579 | 852 | - | - | |
Tpr1g2948 | 923 | Gene3D | Ribonuclease Inhibitor | 26 | 322 | IPR032675 | - | |
Tpr1g2948 | 923 | SMART | serkin_6 | 573 | 853 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2948 | 923 | MobiDBLite | consensus disorder prediction | 443 | 465 | - | - | |
Tpr1g2948 | 923 | MobiDBLite | consensus disorder prediction | 450 | 464 | - | - | |
Tpr1g2948 | 923 | Gene3D | Ribonuclease Inhibitor | 326 | 451 | IPR032675 | - | |
Tpr1g2948 | 923 | ProSitePatterns | Protein kinases ATP-binding region signature. | 579 | 601 | IPR017441 | GO:0005524 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2948 | Tpr-Chr1 | 33848339 | 33852446 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2948 | 73 | 855 | Receptor kinase-like Gene Family | AT5G07280 | 32.152 | 4.56e-86 | 298 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Tpr1g2948 | Pkinase | 2.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2948 | - | K00924 | gmx:100776064 | 1157.13 |