Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2947 | ATGGGTTTTGGAGTTTCCTACGCTGTTCATGTCCTTGTGTTGTTTTCTGTTATGTTTGTTTGTGCATGGTCACAATCACAAGATGATGGTGATGGTGCTGTGATGCAAAAGCTGAAAACTGCACTATCAAAAAGTAATCTTGATTGGTCAGACCCAAATTTTTGCAATTGGAAGGAAGTTCAGTGTAGTGGAAGGAGAGTCACTTCAATTGTAATTCCGGGGAAACTCAATATTGAAGGTTCTTTACCACAAGAATTGGCAAAACTCAGTGAGTTAACTACTTTTGATTTCAGGCAAAATAGTTTATCTGGAAATGTTCCTTACATGCCAAATTCACTTCAGTATTTGCATATTAACAATAACAATTTCACTTCCATGCCAAATGATTTCTTCAATAACCTCACTAATTTGATAGAGGTAGGAATTGATTATAACCCTTTTCTTCAATGGAAAATTCCTTCTAGTCTTAAGAATTGTTTAGCCTTGCAAAAAATTTCTGCTATGAAAGTTAATTTTGTTGGTGAAATTCCTGAATTCTTTGGAACGTTTTCAAGTTTGATTTATTTGCAGTTGTCTTTTAATTCTCTTGAAGGTAATTTGCCTAGTAGTTTATCTGGTAGTTCTATACAGTTCCTTTGGGTGAATGGTCAAAATAGTATTAATAAACTCAATGGTACACTTTCTGTTTTACAAAATATGACTTCATTGCAACAAATTTGGGTTCATGGCAATTTGTTTACCGGTCCTATACCTGATTTTTCAAATCTCGATCAATTGTATGATGTTAGTTTGAGGGATAATAAGTTAACCGGTGTTGTTCCACCGTCTTTAACTTCCCTTCAGAGTTTGAAAGTTGTGAATTTGACAAACAATGATCTTCAAGGTTCACCTCCTAAGTTTCAAGATGGCGTTCAGGTTGATATGGATTTGATTAGAGGGACTAATAGCTTTTGCACCAAGGTTGTTGGTCAACCATGTAGTCCACTTGTTAATGCTTTGCTTTCTGTTGCTGAAGCTTTTGGTTATCCTTTTAAACTTGCTGAAAGTTGGCAAGGTAATAGCCCTTGTAATGGCACTAATTGGGAAGGGATTCCTTGTTCTTCTGGTGGTAACATTAGCACTATCGACTTTCGAAACAAAGGTTTTTCTGGCAGTATATCTCCTAGTTTTGCAAGTCTTACTTCTGTGACGAAGTTGCTTCTTGCTAACAATAATCTCACAGGTACCATACCTAAGGAACTTGCTAGTATGCCGGCTCTGAAAGAGCTAGATGTTTCCAATAATTCGTTATATGGTCAGATACCTTCGTTTCGTGCAGGTGTGATTGTTAACACCAATGGGAATCCTGATATCGGAAAGGATAAACCTCACGGGTCTCCCGGCTCTAGTTCTGGAGGGGAACATAAGAAGAAACTTGCTGTTGGAACTATTATTGGTGTTGTTATTGGGATTGTTGGCTTACTTGGTGTAGGGGTTTTGGTATTTGTTATTTATCGTAGAAGACATAATAAGCATGATGGCAAAGATCAAACACCAAATGCAATAGTCGTACATCCTCGTCATTCTAGAGATGGAAATGCTGTGAAGATAAGTGTTGCAGCATCTGGAAGTGCTGGTGCTGGCATTGCAGGAGGAACCAGTGGATTTAGTCCACCGAGCAGTGTTCAAAATGTGGAAGCTGGTAATATGGTCATTTCAATTCAAGTTTTGAGAGAAGTTACAAACAATTTTAGCGATGAGAACATATTGGGGAAGGGAGGTTTTGGCACTGTATACAAAGGAGAATTGGACGATGGAACAAAGATTGCGGTTAAAAGGATGCAATCTGAAATGGTTGGTGGCCAAGGGTTGGATGAGTTCAAATCTGAAATTGCGGTGCTTACTAAAGTTCGACACAGGCATTTGGTTGCACTCCACGGCTATTGCTTGGAGGACAATGAGAAACTTCTTGTTTATGAATACATGCCTCAGGGGACACTTAGTCAACATCTGTTTGACTGGGAAGATGACGGCTCAAAACCGCTTGAATGGAAGAGACGGCTCTCTATTGCCTTGGATGTTGCTAGAGGTGTTGAATATCTTCATGGTTTGGCACATCAAATTTTCATCCACAGGGATCTGAAACCATCAAATATCTTGCTTGGGGATGATATGCGCGCTAAAGTATCCGACTTTGGATTGGTTCGACTTGCTCCAGAAGGACAAGCCTCATTCCAGACTAGACTTGCCGGAACTTTTGGATATCTAGCACCAGAGTATGCAGTAACTGGACGAGTCACCACAAAGGTTGACATATACAGCTACGGCGTGATTCTTATGGAGATGATAACCGGAAGAAGAGCAATTGAGAACAGCCAACCAGAGGAGAACATCCACCTTGTTGCATGGTTCCGCAGGATGCTATTGAACAAAGACTCGTTCAATAAGGTCGTTGATCCAGCACTGAATATCAATGAGGAAGGCTTGAAGAGTTTCTGGACTATTGCAGAATTGGCCAGCCAGTGTTGTGCAAGAGAGCCTCATCATCGCCCCAACATGGGACACATTGTGAACATCCTAGCACCTCTTGTTGAAATTTGGAAGCCAGCTGAACCTGATGCTGATGACATGTATGGGATTGACTTCGATATGAGTTTGCCTCAAGCATTAAATAGGTGGCAGAATCTTGAAGAAATGAGCAAGACACTCGATATTTCGTATTCTTCATCGATGGTTGATAGTTGTGAGAATACACAGTCAAGTATACCGCCTCGGTCTCCTGGATTTGCTAATTCCTTTACATCTACTGATGCGCGATGA | 2799 | 0.4019 | MGFGVSYAVHVLVLFSVMFVCAWSQSQDDGDGAVMQKLKTALSKSNLDWSDPNFCNWKEVQCSGRRVTSIVIPGKLNIEGSLPQELAKLSELTTFDFRQNSLSGNVPYMPNSLQYLHINNNNFTSMPNDFFNNLTNLIEVGIDYNPFLQWKIPSSLKNCLALQKISAMKVNFVGEIPEFFGTFSSLIYLQLSFNSLEGNLPSSLSGSSIQFLWVNGQNSINKLNGTLSVLQNMTSLQQIWVHGNLFTGPIPDFSNLDQLYDVSLRDNKLTGVVPPSLTSLQSLKVVNLTNNDLQGSPPKFQDGVQVDMDLIRGTNSFCTKVVGQPCSPLVNALLSVAEAFGYPFKLAESWQGNSPCNGTNWEGIPCSSGGNISTIDFRNKGFSGSISPSFASLTSVTKLLLANNNLTGTIPKELASMPALKELDVSNNSLYGQIPSFRAGVIVNTNGNPDIGKDKPHGSPGSSSGGEHKKKLAVGTIIGVVIGIVGLLGVGVLVFVIYRRRHNKHDGKDQTPNAIVVHPRHSRDGNAVKISVAASGSAGAGIAGGTSGFSPPSSVQNVEAGNMVISIQVLREVTNNFSDENILGKGGFGTVYKGELDDGTKIAVKRMQSEMVGGQGLDEFKSEIAVLTKVRHRHLVALHGYCLEDNEKLLVYEYMPQGTLSQHLFDWEDDGSKPLEWKRRLSIALDVARGVEYLHGLAHQIFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGQASFQTRLAGTFGYLAPEYAVTGRVTTKVDIYSYGVILMEMITGRRAIENSQPEENIHLVAWFRRMLLNKDSFNKVVDPALNINEEGLKSFWTIAELASQCCAREPHHRPNMGHIVNILAPLVEIWKPAEPDADDMYGIDFDMSLPQALNRWQNLEEMSKTLDISYSSSMVDSCENTQSSIPPRSPGFANSFTSTDAR* | 933 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2947 | 932 | SUPERFAMILY | L domain-like | 331 | 437 | - | - | |
Tpr1g2947 | 932 | Gene3D | Phosphorylase Kinase; domain 1 | 548 | 654 | - | - | |
Tpr1g2947 | 932 | Gene3D | Ribonuclease Inhibitor | 30 | 324 | IPR032675 | - | |
Tpr1g2947 | 932 | Pfam | Leucine rich repeat N-terminal domain | 331 | 367 | IPR013210 | - | |
Tpr1g2947 | 932 | Pfam | Leucine rich repeat N-terminal domain | 29 | 63 | IPR013210 | - | |
Tpr1g2947 | 932 | PANTHER | OSJNBA0070M12.3 PROTEIN | 1 | 932 | - | - | |
Tpr1g2947 | 932 | ProSiteProfiles | Protein kinase domain profile. | 577 | 857 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2947 | 932 | Pfam | Protein kinase domain | 578 | 851 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2947 | 932 | CDD | STKc_IRAK | 583 | 856 | - | - | |
Tpr1g2947 | 932 | MobiDBLite | consensus disorder prediction | 448 | 468 | - | - | |
Tpr1g2947 | 932 | Pfam | Leucine Rich repeats (2 copies) | 394 | 434 | IPR025875 | - | |
Tpr1g2947 | 932 | SUPERFAMILY | L domain-like | 45 | 302 | - | - | |
Tpr1g2947 | 932 | Gene3D | Transferase(Phosphotransferase) domain 1 | 655 | 868 | - | - | |
Tpr1g2947 | 932 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 702 | 714 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g2947 | 932 | Gene3D | Ribonuclease Inhibitor | 329 | 455 | IPR032675 | - | |
Tpr1g2947 | 932 | PANTHER | TRANSFERASE, PROTEIN KINASE RLK-PELLE-LRR-IX FAMILY-RELATED | 1 | 932 | - | - | |
Tpr1g2947 | 932 | SMART | LRR_typ_2 | 417 | 439 | IPR003591 | - | |
Tpr1g2947 | 932 | SMART | LRR_typ_2 | 183 | 207 | IPR003591 | - | |
Tpr1g2947 | 932 | SMART | LRR_typ_2 | 280 | 302 | IPR003591 | - | |
Tpr1g2947 | 932 | SMART | LRR_typ_2 | 393 | 416 | IPR003591 | - | |
Tpr1g2947 | 932 | SMART | LRR_typ_2 | 109 | 133 | IPR003591 | - | |
Tpr1g2947 | 932 | SUPERFAMILY | Protein kinase-like (PK-like) | 565 | 891 | IPR011009 | - | |
Tpr1g2947 | 932 | ProSitePatterns | Protein kinases ATP-binding region signature. | 583 | 605 | IPR017441 | GO:0005524 | |
Tpr1g2947 | 932 | SMART | serkin_6 | 577 | 857 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2947 | 932 | MobiDBLite | consensus disorder prediction | 909 | 932 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2947 | Tpr-Chr1 | 33842917 | 33847030 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2947 | 77 | 859 | Receptor kinase-like Gene Family | AT5G07280 | 31.181 | 1.37e-85 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-IX | Tpr1g2947 | Pkinase | 1.2e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2947 | - | K00924 | gmx:100776064 | 1188.71 |