Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2941 ATGCAGCAAAACAACAATCCAATCCCAATCTCACTACACAACGCACACGTCAAGCTTCTCGCTTTCGATTTCCTAACCCTAACACCACCATCTTCCCCAGACTACCCCTTCACCCGCAAATTAATCCCAATCACCCGCGCAGAAACCCTAGGAACAATCGTCCTCCGCGATCACAAACCCGCTAAATTCCTCCGTTTCGCAATCGACGACGGAACCGGCTGCATCCCTTGTATCCTCTGGCTGAATCACATGACTTCTCCTCATCTAGCTCGACGTCGTAGTCCACAGGATCTTTGTCTTCTTGCTGATGCTGCTGCGAGATCTGCGGAAATGGTGAAGGTTGGTGTTGTTGCTAGGGTTAGAGGGAAGGTTACTGGGTTTAAAGGTGGTGTGCAGATTACTGTTACTGATGTTTTTGTTGAAAGGGATCCTAATGCTGAGATTTTGCATTGGATTGAGTGTGTTAATTTGGCTAAGAATTGTTATAATCTTGTTAATGTTCCTTCTTCTTCTGGTTCTGTAACGCTTAAATAG 534 0.4588 MQQNNNPIPISLHNAHVKLLAFDFLTLTPPSSPDYPFTRKLIPITRAETLGTIVLRDHKPAKFLRFAIDDGTGCIPCILWLNHMTSPHLARRRSPQDLCLLADAAARSAEMVKVGVVARVRGKVTGFKGGVQITVTDVFVERDPNAEILHWIECVNLAKNCYNLVNVPSSSGSVTLK* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2941 177 Pfam OB-fold nucleic acid binding domain 55 139 IPR004365 GO:0003676
Tpr1g2941 177 Gene3D - 11 165 IPR012340 -
Tpr1g2941 177 PANTHER REPLICATION PROTEIN A-RELATED 11 165 IPR040260 -
Tpr1g2941 177 SUPERFAMILY Nucleic acid-binding proteins 40 156 IPR012340 -
Tpr1g2941 177 PANTHER CST COMPLEX SUBUNIT STN1 11 165 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2941 42 157 Core DNA Replication Machinery Family AT2G24490 27.586 1.60e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2941 K23312 - csin:114287844 204.142