Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2934 ATGCCTCGTGGATTTCAAATTAAAGCAACTTCAGTTACTATATTTACACATTTGTTATTCATAGCAATAACAACACTTGTGTTAGTTTGGTTGTTCCATTTCCGTGAAGGTGTTGCTTTCAATTCTACGACCAATAAAATCAAGATTTTTAATCTTCATCCACTTCTTATGGTACTTGGGTTTATCTTAGTAGGTGGAGAAGCTATTGTGGCATTCAAGTCCATCCCTGGAAAAAGAAGTTCAGCAAAAGTGTTTCATCTTTTACTTCATCTAATAGCTCTAACATCAGGAGTTTTAGGAATTATTGTAATTTTCAAATTTAAAAAAGAAGTAGGTCTTCCTAATATGTTTACATTGCACTCTTGGTTAGGCATCTCAGCAATCTCTGCATTTGGTTTGCAGTATATATTGGGCTTCTTTGCTTACTTCTTCCCAGGAGCAGAAACATCTACAAGAGCTACACTTTTGCCATGGCACAAGTTTATAGGAATAGTCATCTTTTTGCTTGCAGTAGCTACAGCTGAAACTGGTTTGATTCAATATTTTGATTTTTATCAACTCTTCAGAAACCAAGAATCTCTAATAGTGAATTTCACTGGTCTATTGCTCTTTCTGTTTTCTGTCTTTGTTGGTCTCTCTGTCATTCTCCCAAGAAATTACTGA 663 0.3499 MPRGFQIKATSVTIFTHLLFIAITTLVLVWLFHFREGVAFNSTTNKIKIFNLHPLLMVLGFILVGGEAIVAFKSIPGKRSSAKVFHLLLHLIALTSGVLGIIVIFKFKKEVGLPNMFTLHSWLGISAISAFGLQYILGFFAYFFPGAETSTRATLLPWHKFIGIVIFLLAVATAETGLIQYFDFYQLFRNQESLIVNFTGLLLFLFSVFVGLSVILPRNY* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2934 220 SMART 561_7 52 178 IPR006593 -
Tpr1g2934 220 Pfam Eukaryotic cytochrome b561 52 180 IPR006593 -
Tpr1g2934 220 Gene3D - 5 220 - -
Tpr1g2934 220 PANTHER CYTOCHROME B561 FAMILY PROTEIN, EXPRESSED 6 217 - -
Tpr1g2934 220 PANTHER CYTOCHROME B561-RELATED 6 217 IPR043205 GO:0016491
Tpr1g2934 220 ProSiteProfiles Cytochrome b561 domain profile. 15 215 IPR006593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2934 Tpr-Chr1 33714052 33716322 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2934 6 214 Chloroplast and Mitochondria Gene Families AT4G25570 41.784 1.40e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2934 K08360 - gmx:100785824 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr1g2934 1 33714052 33716322 Tpr1g2934 1 33714052 33716322 ECH