Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr1g2933 ATGGAGCTTCCAGATTGTTACTATCCCATACCACCAATTAACATCACCCCATGTGTACCAACACCAAATCACACTCTCCATCTCAATAATCTTGATGACGAATTGTACAAGAAATTTGTACCTTATGTGTATATATTCAAGAAATCTGTGGGAATGGATACCTTGAAGTCTTCCCTATCAAGAGTTTTGGTGGATTACTACCCTTTTGCTGGTAGGTTTAGGACAAGCACCGAGGATGAGAACAAGTTGGTGGTGGATTGTAATGGAGAAGGTGCTTTGTTTGTTGAGGCTTCAATGGATATCAATGTTGAAGAATTACTCAAATCTTCTATGATGCCTAATAGCTCATGGAAGAAGATCATTTGTAATGTGGAATCTAAAAATTCTATAGATACTCCTCTTCTTGTAATCCAGGTGACTAATCTTCGATGTGGAGGAATGATCTTGTGCGCATCAATCAACCATAGTTTGAGTGATGGCACGGGCGCATCACAATTTCTAAATGCTTGGGGCCAACTAACCCAAAATCCCAATAGTAATTTGACAATCATACCTTCGCATGATCGACGAGTATTGAAGATTCAAGAACCTCCGCAAGTAAATTTCACTCACCCAATATACACCAAAGAATCAACACACCCGAATCCCGAATCAAACCTTTCGATGTGGTTTCTAACACAATCACTTGTCCCTACATCATTCATCTTCAGATTCAATGAAATTCTTCGCTTAAAGAAACAATGTACGACATCATCGTTCAATCACATAACAAGCTTTGAAGCAATAACAGCGCACTTATGGCGCTCATTAGTAAAAGCAACTAACTTGTCCCTCTCTCGAACTGTGAAGCTTTGTTTCACAGTTAACTTTCGAAAGAAGATGAAACTTCTTCCAGAAGGGTATTATGGGAATGGATTTGTCCTTGTCGGTGTTGAGAGCATAGTGAAGGATTTAGTGGCTCCAAATAACCTAGATCATGGTGTGAAACTTGTGCAAAAAGCCAAAGCTAGTGTGAATGAAGAATATATTAAGTCAACGATTGATGTGTTGAAGGACAAAAAGGTAATTCATGATGGTTCTATAAGCTTATATGTAACACAATGGAATAGATTAGGGTTGGAAGATGTTGATTTTGGAGAAGGGAAGCCTTTGCATGTAGGTCCTTTATCTGTTCAAATTTATTGTGTGCTTTTGCCGGTTATTGGTGATCCTAATGCGGTTAGAGTGCTTTTATCAGTTCCTAAGAATATAGTGGAAAAGTTTCAACATTACATGATAGAGATAGAGAGTTGGGGAAAAGATGAATAA 1308 0.383 MELPDCYYPIPPINITPCVPTPNHTLHLNNLDDELYKKFVPYVYIFKKSVGMDTLKSSLSRVLVDYYPFAGRFRTSTEDENKLVVDCNGEGALFVEASMDINVEELLKSSMMPNSSWKKIICNVESKNSIDTPLLVIQVTNLRCGGMILCASINHSLSDGTGASQFLNAWGQLTQNPNSNLTIIPSHDRRVLKIQEPPQVNFTHPIYTKESTHPNPESNLSMWFLTQSLVPTSFIFRFNEILRLKKQCTTSSFNHITSFEAITAHLWRSLVKATNLSLSRTVKLCFTVNFRKKMKLLPEGYYGNGFVLVGVESIVKDLVAPNNLDHGVKLVQKAKASVNEEYIKSTIDVLKDKKVIHDGSISLYVTQWNRLGLEDVDFGEGKPLHVGPLSVQIYCVLLPVIGDPNAVRVLLSVPKNIVEKFQHYMIEIESWGKDE* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr1g2933 435 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 427 - -
Tpr1g2933 435 Pfam Transferase family 15 425 - -
Tpr1g2933 435 Gene3D - 226 428 IPR023213 -
Tpr1g2933 435 Gene3D - 11 209 IPR023213 -
Tpr1g2933 435 PANTHER BNAC03G58010D PROTEIN 12 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr1g2933 Tpr-Chr1 33709523 33711346 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr1g2933 15 428 Monolignol Biosynthesis Gene Families AT5G48930 26.077 2.96e-46 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr1g2933 - - gmx:100797134 498.049