Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr1g2909 | ATGGATCCTTCTATGAACCATGTTGGTCATGGAGGAATGGATATACCAATTATGCATGAAAGTGATAGGTATGAGCTTGTACGTGATATTGGTTCTGGAAATTTTGGGGTGGCTAGACTTTTGAGAGATAAACACACTGATCAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGATAAGATAGATGAAAATGTACAAAGAGAAATTATAAATCATAGATCACTGAGGCATCCCAATATTGTCAGGTTCAAGGAGGTCATACTTACTCCCACACATGTAGCTATTGTGATGGAATATGCTTCTGGTGGAGAGCTATTTGAGCGAATATGCAATGCAGGACGGTTCAGCGAGGATGAGGCACGGTTTTTCTTCCAACAACTTATATCAGGGGTTAGCTACTGTCATGCAATGCAAGTATGTCACCGTGACTTGAAGTTGGAGAACACATTGCTCGATGGTAGTCCGGCTCCTCGTTTGAAGATTTGTGATTTTGGTTATTCAAAGTCCTCGGTGCTACATTCGCAACCAAAATCTACAGTCGGTACCCCTGCATATATCGCTCCTGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGCGGTGTGACCTTATATGTCATGTTGGTCGGTGCATATCCTTTTGAGGATCCACAGGAGCCTAAAAATTTCCGGAAGACTATTCATAGGATTTTGAAAGTTCAATACTCAATTCCTGATTATGTTCAAATATCTCCCGAGTGCCGTCATTTGATCTCAAGGATCTTTGTTGCAGACCCTGCACAGAGAATAAGTATGCCTGAGATTCGAAACCACGAGTGGTTTTTGAAGAACCTTCCAGCTGATCTCATGGTCGGGAATACAACGAACGGCCACTTTCAGGAGCCTGAACAACCAATGCAAACAATTGAAGAAATCATGCAGATAATTAGTGAGGCTACTATTCCTGCAGCTGGAACTCATCAGTCTCTCACTCAGTATCTTACCGGTAGCTTGGACATTGATGACGAAATGGACGAGGATATAGACACTGATCCTGACCTTGATATCGATAGCAGCGGTGAAATAGTTTATGCAATGTAA | 1098 | 0.4189 | MDPSMNHVGHGGMDIPIMHESDRYELVRDIGSGNFGVARLLRDKHTDQLVAVKYIERGDKIDENVQREIINHRSLRHPNIVRFKEVILTPTHVAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPQEPKNFRKTIHRILKVQYSIPDYVQISPECRHLISRIFVADPAQRISMPEIRNHEWFLKNLPADLMVGNTTNGHFQEPEQPMQTIEEIMQIISEATIPAAGTHQSLTQYLTGSLDIDDEMDEDIDTDPDLDIDSSGEIVYAM* | 366 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr1g2909 | 365 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 139 | 151 | IPR008271 | GO:0004672|GO:0006468 | |
Tpr1g2909 | 365 | CDD | STKc_SnRK2-3 | 23 | 279 | - | - | |
Tpr1g2909 | 365 | SUPERFAMILY | Protein kinase-like (PK-like) | 17 | 307 | IPR011009 | - | |
Tpr1g2909 | 365 | Pfam | Protein kinase domain | 24 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2909 | 365 | ProSiteProfiles | Protein kinase domain profile. | 24 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tpr1g2909 | 365 | Gene3D | Transferase(Phosphotransferase) domain 1 | 100 | 288 | - | - | |
Tpr1g2909 | 365 | PANTHER | SERINE/THREONINE KINASE | 15 | 360 | - | - | |
Tpr1g2909 | 365 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 99 | - | - | |
Tpr1g2909 | 365 | ProSitePatterns | Protein kinases ATP-binding region signature. | 30 | 53 | IPR017441 | GO:0005524 | |
Tpr1g2909 | 365 | PANTHER | SERINE/THREONINE-PROTEIN KINASE SRK2E | 15 | 360 | - | - | |
Tpr1g2909 | 365 | SMART | serkin_6 | 24 | 280 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr1g2909 | Tpr-Chr1 | 33437505 | 33440935 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr1g2909 | 23 | 284 | CBL-interacting serine-threonine protein kinases | AT5G25110 | 44.526 | 6.37e-69 | 223 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CAMK_OST1L | Tpr1g2909 | Pkinase | 4e-72 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr1g2909 | K14498 | - | gmx:100804702 | 651.744 |